RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Arid1bE9Q4N7 2244 aa10.92□□□□□ -0.66
Nkx3-1-201ENSMUST00000022646 Il1f10Q8R459 152 aa10.91□□□□□ -0.66
Nkx3-1-201ENSMUST00000022646 Fgfbp3Q1HCM0 245 aa10.91□□□□□ -0.66
Nkx3-1-201ENSMUST00000022646 Morn5Q9DAI9 170 aa10.91□□□□□ -0.66
Nkx3-1-201ENSMUST00000022646 CubnQ9JLB4 3623 aa10.91□□□□□ -0.66
Nkx3-1-201ENSMUST00000022646 Srp14P16254 110 aaKnown RBP10.9□□□□□ -0.66
Nkx3-1-201ENSMUST00000022646 Insl3O09107 122 aa10.9□□□□□ -0.66
Nkx3-1-201ENSMUST00000022646 March3Q8BRX9 218 aa10.89□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Igkv4-91A0A075B5L2 119 aa10.89□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Tmem238A9JSM3 176 aa10.89□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 NpwA0A1L1STR8 176 aa10.89□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Rpl13aP19253 203 aaKnown RBP10.89□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Mapk1ip1lQ8BH93 242 aa10.88□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Igkv4-78A0A0A6YYE5 119 aa10.88□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Gm45785A0A1B0GT05 94 aa10.88□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Ighv1-11A0A0A6YWI9 117 aa10.87□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Tcrg-C1A0A075B5Z0 172 aa10.87□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Trdv5A0A075B661 115 aa10.87□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Gm28269A0A087WSG3 125 aa10.86□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Phlda3Q9WV95 125 aa10.86□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Notch3Q61982 2318 aa10.86□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Rif1Q6PR54 2419 aaKnown RBP10.86□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Gm20730A0A075B5J6 119 aa10.86□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Rmi2Q3UPE3 149 aa10.86□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Rbmy1bQ60990 380 aa10.86□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 FlnaQ8BTM8 2647 aaKnown RBP10.86□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Cox8cA6H666 72 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Q99M08 65 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Zc2hc1bQ9D534 172 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Trav13d-1A0A075B606 110 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Gm9513B3GLJ6 99 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Gm7849D3YX03 116 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 P84751 237 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Trav3-1Q5R1I8 114 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Gm7075D3Z497 112 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Gm9887F6RFI0 207 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Spata25Q9DA57 226 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Xirp2Q4U4S6 3784 aa10.85□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Atp6v0e2Q91XE7 81 aa10.84□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Crip2Q9DCT8 208 aaKnown RBP10.84□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Igfn1Q3KNY0 2849 aa10.84□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Rnf152Q8BG47 203 aa10.84□□□□□ -0.67
Nkx3-1-201ENSMUST00000022646 Gm9747Q810H1 104 aa10.83□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Col7a1Q63870 2944 aa10.83□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 PrlhG3UWC3 86 aa10.83□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Ighv1-72P01751 139 aa10.83□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Defb47Q30KN1 79 aa10.83□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gm6793B2RXM2 351 aa10.83□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Defb2P82020 71 aa10.83□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Defb26Q30KN7 186 aa10.83□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 BsnO88737 3942 aa10.83□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gm10322F7D7I4 111 aa10.82□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Rpl32-psP17932 135 aa10.82□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Ly6gP35461 111 aa10.82□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gatd1Q8BFQ8 220 aa10.81□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Unc79Q0KK59 2596 aa10.81□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Fgf23Q9EPC2 251 aa10.81□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gm17472A0A075B683 117 aa10.81□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Lypd5Q9D7Z7 256 aa10.81□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Dmbt1Q60997 2085 aa10.8□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gm26661M0QWV4 156 aa10.8□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Defb42Q8BVB5 75 aa10.8□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Tenm3Q9WTS6 2715 aa10.8□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gm10135F6TEE5 83 aa10.8□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gm10300Q8C8P7 189 aa10.8□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Helz2E9QAM5 2947 aaKnown RBP10.8□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Tnfrsf23Q9ER63 176 aa10.79□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Wnk1P83741 2377 aa10.79□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Eif4ebp1Q60876 117 aa10.78□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gm9936Q8C864 160 aa10.78□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Cd164l2Q9D6W7 172 aa10.78□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Ank2Q8C8R3 3898 aa10.78□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gm11444F6QMA6 170 aa10.78□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Prelid3aQ8VE85 172 aa10.78□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gm10542F6XDR3 90 aa10.77□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Gm9922Q8C3P1 144 aa10.77□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 4930442H23RikQ9D5G7 103 aa10.77□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Cdip1Q9DB75 208 aa10.77□□□□□ -0.68
Nkx3-1-201ENSMUST00000022646 Myo9aQ8C170 2542 aa10.77□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 4930415O20RikQ8CDT5 131 aa10.77□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Tmem101Q91VP7 257 aa10.77□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Spink1P09036 80 aa10.77□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 MtorQ9JLN9 2549 aa10.76□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Rpl36aP83882 106 aaKnown RBP10.76□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Nop10Q9CQS2 64 aa10.76□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Glrp1E9Q9S8 174 aa10.76□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 P01729 129 aa10.75□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Fxyd5P97808 178 aa10.75□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 2310009B15RikA0A0A6YWI4 143 aa10.75□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 BC048562Q80ZQ7 204 aa10.75□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Igkv4-79A0A075B5L8 119 aa10.75□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Trav4-3A0A0B4J1K1 110 aa10.75□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Cfc1P97766 202 aa10.75□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Gm11020F6ZGD5 61 aa10.74□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 P01823 113 aa10.74□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Lgals4Q8K419 326 aa10.74□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Hivep2Q3UHF7 2430 aa10.74□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Rpl35aO55142 110 aa10.73□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Gm29423A0A087WRM1 55 aa10.73□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 H1fxQ80ZM5 188 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms