RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Dand5Q76LW6 185 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Trbv16A0A0B4J1H3 115 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Nbl1Q61477 178 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Mrps12O35680 139 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ighv1-37A0A0A6YW32 117 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Fxyd5P97808 178 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Pip4p2Q9CZX7 257 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Trav6-4A0A075B6B4 115 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Shank3Q4ACU6 1730 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Gm2564F6Z9S8 108 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ccl19O70460 108 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ly6c1P0CW02 131 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Defb26Q30KN7 186 aa4.73□□□□□ -1.65
Ubr4-212ENSMUST00000165860 1520401A03RikA0A0J9YVH6 598 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ndufs7Q9DC70 224 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ighv12-3A0A075B5T1 117 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 P06330 118 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Svs5P30933 122 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Naa38Q9D2U5 125 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Igkv8-16A0A0G2JDG9 121 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 P04940 107 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 P04942 107 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Igkv8-34A0A0G2JDU0 121 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 A730015C16RikQ8C992 119 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ighv1-55A0A075B5W6 117 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 LoxP28301 411 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 4930564D02RikQ9D4S4 103 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ndufa12Q7TMF3 145 aaKnown RBP4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 P01723 117 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ighv1-80A0A075B5Y3 117 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Rpl39P62892 51 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 PtprfA2A8L5 1898 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Trbv13-1A0A0B4J1P8 112 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ang3P97802 145 aa4.72□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Sbf1Q6ZPE2 1867 aa4.71□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Trav9d-4A0A0G2JG37 103 aa4.71□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Igkv3-9A0A140T8P4 119 aa4.71□□□□□ -1.65
Ubr4-212ENSMUST00000165860 IgipA0A1B0GR74 53 aa4.71□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Igkv5-37A0A140T8N4 115 aa4.71□□□□□ -1.65
Ubr4-212ENSMUST00000165860 P01630 113 aa4.71□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Zfp36P22893 319 aaKnown RBP4.71□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ube2e1P52482 193 aa4.71□□□□□ -1.65
Ubr4-212ENSMUST00000165860 Ntn5Q3UQ22 452 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gm10518F6UQQ9 182 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gm21060J3KMU4 56 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Sp5Q9JHX2 398 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Cox17P56394 63 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Crip1P63254 77 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Nlrc5C3VPR6 1915 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Arid2E9Q7E2 1828 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gm11011D3Z3L9 86 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gm12253Q5NC48 229 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Spry4Q9WTP2 300 aa4.71□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Ighv1-77A0A0G2JGS9 117 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Lypd6Q8BPP5 171 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 ThadaA8C756 1938 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Ppp1r32Q148A4 427 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 P18532 116 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Prok1Q14A28 105 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 P06320 134 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Tln1P26039 2541 aaKnown RBP4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 3110021N24RikJ3QMN2 152 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 P18527 97 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Usmg5Q78IK2 58 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Zswim8Q3UHH1 1832 aaKnown RBP4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Dpm3Q9D1Q4 92 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Ang2Q64438 145 aa4.7□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gm5629P06327 117 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Q9D8Q6 235 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 3110082J24RikF6Z6Z2 108 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 P04941 107 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Ralgapa2A3KGS3 1872 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Ighv1-50A0A075B5W1 117 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Mapk1ip1lQ8BH93 242 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Pcnx3Q8VI59 2028 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 1700074P13RikQ9D9G7 251 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Ang4Q3TMQ6 144 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 ArtnQ9Z0L2 224 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Q08AU9 97 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 EnhoQ8K1D8 76 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 2310009B15RikA0A0A6YWI4 143 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Egr2P08152 470 aa4.69□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Prop1P97458 223 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Ighv3-6P18531 116 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Usp9xP70398 2559 aaKnown RBP4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Ighv2-6-8A0A0A6YWY9 116 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gata4Q08369 441 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Dazap2Q9DCP9 168 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 P06329 120 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gp9O88186 177 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gm5941Q497P9 117 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Notch4P31695 1964 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gm20499D3Z4G5 72 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 GrnP28798 589 aaKnown RBP4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 CnfnQ6PCW6 111 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gm20708H3BKF4 155 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 P04946 108 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 AW146154Q3TPQ7 468 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Bean1Q9EQG5 255 aa4.68□□□□□ -1.66
Ubr4-212ENSMUST00000165860 Gm19345G3UYD9 124 aa4.68□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 66 ms