RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 CadB2RQC6 2225 aa11.95□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Gm3618D3Z4P5 127 aa11.95□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Gm44965A0A0N4SVR3 59 aa11.95□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Zmat4Q8BZ94 229 aa11.95□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Sec16aA2AIX1 2377 aa11.95□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Cryba4Q9JJV0 196 aa11.95□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Igkv8-18A0A0B4J1J3 123 aa11.94□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Prop1P97458 223 aa11.94□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Fgf6P21658 208 aa11.94□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Atp5eP56382 52 aa11.94□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Ighv12-3A0A075B5T1 117 aa11.94□□□□□ -0.5
Ubr2-201ENSMUST00000113335 P01745 121 aa11.94□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Col5a3Q9JLI2 1739 aa11.94□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Ebi3O35228 228 aa11.93□□□□□ -0.5
Ubr2-201ENSMUST00000113335 SonQ9QX47 2444 aaKnown RBP11.93□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Sdk1Q3UH53 2193 aa11.93□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Obox8V9GWY9 217 aa11.93□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Pla2g2aP31482 146 aa11.93□□□□□ -0.5
Ubr2-201ENSMUST00000113335 9430069I07RikQ9CX21 111 aa11.93□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Snai3Q9QY31 287 aa11.93□□□□□ -0.5
Ubr2-201ENSMUST00000113335 P84751 237 aa11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 MgamB5THE2 1827 aa11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Sdk2Q6V4S5 2176 aa11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 P01728 117 aa11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 A230072I06RikQ3UUJ8 172 aa11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Fam222aQ6PGH4 453 aa11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Igkv3-5A0A140T8M6 119 aa11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Gm17577J3QNF7 156 aa11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Defb18Q30KP5 85 aa11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 P06328 117 aa11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Rpl18aP62717 176 aaKnown RBP11.92□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Tmem223Q9CQE2 199 aaKnown RBP11.91□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Ighv8-12A0A0G2JDE1 119 aa11.91□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Gm9958Q8C9U4 106 aa11.91□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Ncor1Q60974 2453 aa11.91□□□□□ -0.5
Ubr2-201ENSMUST00000113335 P01747 120 aa11.91□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Map6d1Q14BB9 191 aa11.91□□□□□ -0.5
Ubr2-201ENSMUST00000113335 AW146154Q3TPQ7 468 aa11.91□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Gm5468Q8C3D3 155 aa11.91□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Ndufa4l2Q4FZG9 87 aa11.9□□□□□ -0.5
Ubr2-201ENSMUST00000113335 PpdpfQ9CR37 115 aa11.9□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Triap1Q9D8Z2 76 aa11.9□□□□□ -0.5
Ubr2-201ENSMUST00000113335 B9d2Q3UK10 175 aa11.9□□□□□ -0.5
Ubr2-201ENSMUST00000113335 Ormdl1Q921I0 153 aa11.9□□□□□ -0.5
Ubr2-201ENSMUST00000113335 4930470P17RikQ9D542 155 aa11.9□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Igf1P05017 153 aa11.89□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Zfand3Q497H0 227 aa11.89□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Rpl39lQ9CQD0 51 aa11.89□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Anapc1P53995 1944 aaKnown RBP11.89□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Trav9n-4A0A075B631 113 aa11.89□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Ighv1-11A0A0A6YWI9 117 aa11.89□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Reg3bP35230 175 aa11.89□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Sh2d1aO88890 126 aa11.89□□□□□ -0.51
Ubr2-201ENSMUST00000113335 F5O88783 2183 aa11.89□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Ncoa6Q9JL19 2067 aa11.88□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Gm37389A0A0A6YW05 95 aa11.88□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Higd2aQ9CQJ1 106 aa11.88□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Pcdh15Q99PJ1 1943 aa11.88□□□□□ -0.51
Ubr2-201ENSMUST00000113335 1700012A03RikQ9DAF1 130 aa11.88□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Nsun4C4P6S0 806 aaKnown RBP11.88□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Vpreb2P13373 142 aa11.88□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Ighv2-6A0A075B6A7 116 aa11.87□□□□□ -0.51
Ubr2-201ENSMUST00000113335 9530003J23RikQ8BM26 151 aa11.87□□□□□ -0.51
Ubr2-201ENSMUST00000113335 SptssbQ925E8 76 aa11.87□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Tmem254aP0DN89 123 aa11.87□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Tmem254bP0DN90 123 aa11.87□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Tmem254cP0DN91 123 aa11.87□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Ube2aQ9Z255 152 aa11.86□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Usf3B2RUQ2 2221 aa11.86□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Med13lQ6JPI3 2207 aa11.86□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Dscaml1Q4VA61 2053 aa11.86□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Q9DAQ5 155 aa11.86□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Gm10735Q3US96 136 aa11.85□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Gm14137Q8CE97 175 aa11.85□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Fxyd5P97808 178 aa11.85□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Naa38Q9D2U5 125 aa11.85□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Rnase1P00683 149 aa11.84□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Igkv3-10A0A0G2JGN0 119 aa11.84□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Edn2P22389 175 aa11.84□□□□□ -0.51
Ubr2-201ENSMUST00000113335 Plxnb1Q8CJH3 2119 aa11.83□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Rp1l1Q8CGM2 1859 aa11.83□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Vpreb3D3Z6J4 130 aa11.83□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Gm12353A2AGJ4 60 aa11.83□□□□□ -0.52
Ubr2-201ENSMUST00000113335 P18527 97 aa11.82□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Gm5878E9PUB3 99 aa11.82□□□□□ -0.52
Ubr2-201ENSMUST00000113335 NrgnP60761 78 aa11.82□□□□□ -0.52
Ubr2-201ENSMUST00000113335 P01820 115 aa11.81□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Dennd4cA6H8H2 1906 aa11.81□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Tet1Q3URK3 2007 aaKnown RBP11.81□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Ighv1-75A0A075B5Y2 117 aa11.8□□□□□ -0.52
Ubr2-201ENSMUST00000113335 9230102O04RikA2ASX7 82 aa11.8□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Prr12E9PYL2 2035 aaKnown RBP11.8□□□□□ -0.52
Ubr2-201ENSMUST00000113335 P01659 112 aa11.79□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Tfpi2O35536 230 aa11.79□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Tmem213Q08EA8 116 aa11.79□□□□□ -0.52
Ubr2-201ENSMUST00000113335 AvpP35455 168 aa11.79□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Cfc1P97766 202 aa11.79□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Odf3Q920N1 254 aa11.79□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Ighv1-85A0A075B5Y6 117 aa11.78□□□□□ -0.52
Ubr2-201ENSMUST00000113335 CrygcQ61597 174 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms