RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Rhox8Q6VSS7 320 aa27.56■■■□□ 2
Ubr2-201ENSMUST00000113335 Rpgrip1Q9EPQ2 1331 aa25.45■■□□□ 1.67
Ubr2-201ENSMUST00000113335 Ehmt2Q9Z148 1263 aaKnown RBP25.23■■□□□ 1.63
Ubr2-201ENSMUST00000113335 Las1lA2BE28 776 aaKnown RBP24.66■■□□□ 1.54
Ubr2-201ENSMUST00000113335 Cngb1E1AZ71 1325 aa24.65■■□□□ 1.54
Ubr2-201ENSMUST00000113335 Wdr66E9Q743 1299 aa24.55■■□□□ 1.52
Ubr2-201ENSMUST00000113335 Ccdc136Q3TVA9 1136 aa24.39■■□□□ 1.49
Ubr2-201ENSMUST00000113335 Zeb1Q64318 1117 aa24.3■■□□□ 1.48
Ubr2-201ENSMUST00000113335 Esf1Q3V1V3 845 aaKnown RBP24.16■■□□□ 1.46
Ubr2-201ENSMUST00000113335 Pelp1Q9DBD5 1123 aaKnown RBP24.15■■□□□ 1.46
Ubr2-201ENSMUST00000113335 Ube2uB1AUC4 352 aa24.1■■□□□ 1.45
Ubr2-201ENSMUST00000113335 Gab3Q8BSM5 595 aa24.08■■□□□ 1.45
Ubr2-201ENSMUST00000113335 Npm2Q80W85 207 aa23.77■■□□□ 1.4
Ubr2-201ENSMUST00000113335 Trim41Q5NCC3 630 aa23.72■■□□□ 1.39
Ubr2-201ENSMUST00000113335 Myt1lP97500 1187 aa23.66■■□□□ 1.38
Ubr2-201ENSMUST00000113335 Amer1Q7TS75 1132 aa23.64■■□□□ 1.37
Ubr2-201ENSMUST00000113335 CenpbP27790 599 aa23.53■■□□□ 1.36
Ubr2-201ENSMUST00000113335 Acin1Q9JIX8 1338 aaKnown RBP23.53■■□□□ 1.36
Ubr2-201ENSMUST00000113335 UbtfP25976 765 aaKnown RBP23.3■■□□□ 1.32
Ubr2-201ENSMUST00000113335 NefmP08553 848 aa23.29■■□□□ 1.32
Ubr2-201ENSMUST00000113335 NischQ80TM9 1593 aa23.21■■□□□ 1.31
Ubr2-201ENSMUST00000113335 Slc24a1Q91WD8 1130 aa23.21■■□□□ 1.31
Ubr2-201ENSMUST00000113335 Stra8P70278 393 aa23.13■■□□□ 1.29
Ubr2-201ENSMUST00000113335 Ttbk1Q6PCN3 1308 aa22.93■■□□□ 1.26
Ubr2-201ENSMUST00000113335 Cdk11bP24788 784 aaKnown RBP22.89■■□□□ 1.26
Ubr2-201ENSMUST00000113335 Pcgf6Q99NA9 353 aa22.84■■□□□ 1.25
Ubr2-201ENSMUST00000113335 Ccdc180J3QNE4 1664 aa22.71■■□□□ 1.23
Ubr2-201ENSMUST00000113335 HrcG5E8J6 738 aa22.65■■□□□ 1.22
Ubr2-201ENSMUST00000113335 Il27Q8K3I6 234 aa22.62■■□□□ 1.21
Ubr2-201ENSMUST00000113335 Nop58Q6DFW4 536 aaKnown RBP22.6■■□□□ 1.21
Ubr2-201ENSMUST00000113335 Ppargc1bQ8VHJ7 1014 aa22.6■■□□□ 1.21
Ubr2-201ENSMUST00000113335 4933416C03RikQ3V063 378 aa22.59■■□□□ 1.21
Ubr2-201ENSMUST00000113335 4930567H17RikQ3V0K5 233 aa22.58■■□□□ 1.21
Ubr2-201ENSMUST00000113335 NrdcQ8BHG1 1161 aa22.55■■□□□ 1.2
Ubr2-201ENSMUST00000113335 Tnnt3Q9QZ47 272 aa22.53■■□□□ 1.2
Ubr2-201ENSMUST00000113335 Neurod1Q60867 357 aa22.52■■□□□ 1.2
Ubr2-201ENSMUST00000113335 Eif5bQ05D44 1216 aaKnown RBP22.51■■□□□ 1.19
Ubr2-201ENSMUST00000113335 Fam50aQ9WV03 339 aaKnown RBP22.51■■□□□ 1.19
Ubr2-201ENSMUST00000113335 Ap3b1Q9Z1T1 1105 aa22.5■■□□□ 1.19
Ubr2-201ENSMUST00000113335 Myt1Q8CFC2 1127 aa22.49■■□□□ 1.19
Ubr2-201ENSMUST00000113335 NclP09405 707 aaKnown RBP22.48■■□□□ 1.19
Ubr2-201ENSMUST00000113335 Supt5hO55201 1082 aaKnown RBP22.44■■□□□ 1.18
Ubr2-201ENSMUST00000113335 Anp32bQ9EST5 272 aaKnown RBP22.4■■□□□ 1.18
Ubr2-201ENSMUST00000113335 NeflP08551 543 aa22.39■■□□□ 1.18
Ubr2-201ENSMUST00000113335 Rtl1Q7M732 1744 aa22.28■■□□□ 1.16
Ubr2-201ENSMUST00000113335 TonslQ6NZL6 1363 aa22.25■■□□□ 1.15
Ubr2-201ENSMUST00000113335 Os9Q8K2C7 672 aa22.21■■□□□ 1.15
Ubr2-201ENSMUST00000113335 Zcchc6Q5BLK4 1491 aaKnown RBP22.12■■□□□ 1.13
Ubr2-201ENSMUST00000113335 Mier1Q5UAK0 511 aa22.1■■□□□ 1.13
Ubr2-201ENSMUST00000113335 Rtl5Q5DTT4 599 aa21.99■■□□□ 1.11
Ubr2-201ENSMUST00000113335 ClspnQ80YR7 1315 aa21.81■■□□□ 1.08
Ubr2-201ENSMUST00000113335 Zbtb7cQ8VCZ7 619 aa21.8■■□□□ 1.08
Ubr2-201ENSMUST00000113335 DiexfQ8BTT6 772 aaKnown RBP21.79■■□□□ 1.08
Ubr2-201ENSMUST00000113335 Anp32aO35381 247 aa21.77■■□□□ 1.08
Ubr2-201ENSMUST00000113335 Lmod2Q3UHZ5 550 aa21.77■■□□□ 1.08
Ubr2-201ENSMUST00000113335 Plekhg3Q4VAC9 1341 aa21.76■■□□□ 1.07
Ubr2-201ENSMUST00000113335 Abcc9P70170 1546 aa21.73■■□□□ 1.07
Ubr2-201ENSMUST00000113335 DaxxO35613 739 aa21.71■■□□□ 1.07
Ubr2-201ENSMUST00000113335 Gm38655A0A286YDK6 273 aa21.68■■□□□ 1.06
Ubr2-201ENSMUST00000113335 Mapk8ip2Q9ERE9 830 aa21.68■■□□□ 1.06
Ubr2-201ENSMUST00000113335 Gm35339A0A140LHH9 1649 aa21.68■■□□□ 1.06
Ubr2-201ENSMUST00000113335 Zbtb4Q5F293 982 aa21.62■■□□□ 1.05
Ubr2-201ENSMUST00000113335 Hnrnpul2Q00PI9 745 aaKnown RBP21.6■■□□□ 1.05
Ubr2-201ENSMUST00000113335 Chic1Q8CBW7 227 aa21.54■■□□□ 1.04
Ubr2-201ENSMUST00000113335 Csrnp3P59055 597 aa21.5■■□□□ 1.03
Ubr2-201ENSMUST00000113335 Eid3Q3V124 375 aa21.5■■□□□ 1.03
Ubr2-201ENSMUST00000113335 Sall2Q9QX96 1004 aa21.48■■□□□ 1.03
Ubr2-201ENSMUST00000113335 Nlrp6Q91WS2 869 aa21.47■■□□□ 1.03
Ubr2-201ENSMUST00000113335 Npm1Q61937 292 aaKnown RBP21.45■■□□□ 1.02
Ubr2-201ENSMUST00000113335 ArxO35085 564 aa21.45■■□□□ 1.02
Ubr2-201ENSMUST00000113335 Polr3glQ8R0C0 218 aa21.44■■□□□ 1.02
Ubr2-201ENSMUST00000113335 Prdm10Q3UTQ7 1184 aa21.44■■□□□ 1.02
Ubr2-201ENSMUST00000113335 Erich6D3Z6S9 713 aa21.41■■□□□ 1.02
Ubr2-201ENSMUST00000113335 Anks4bQ8K3X6 423 aa21.39■■□□□ 1.01
Ubr2-201ENSMUST00000113335 Gm13697A2AK42 830 aa21.38■■□□□ 1.01
Ubr2-201ENSMUST00000113335 Ifnlr1Q8CGK5 535 aa21.34■■□□□ 1.01
Ubr2-201ENSMUST00000113335 Atp1b4Q99ME6 356 aa21.31■■□□□ 1
Ubr2-201ENSMUST00000113335 Aplp2Q06335 707 aa21.24■□□□□ 0.99
Ubr2-201ENSMUST00000113335 Ppp4r2Q0VGB7 417 aa21.23■□□□□ 0.99
Ubr2-201ENSMUST00000113335 Clip1Q922J3 1391 aa21.22■□□□□ 0.99
Ubr2-201ENSMUST00000113335 Calr4Q3TQS0 420 aa21.21■□□□□ 0.99
Ubr2-201ENSMUST00000113335 Dcaf1Q80TR8 1506 aa21.13■□□□□ 0.97
Ubr2-201ENSMUST00000113335 Rangap1P46061 589 aaKnown RBP21.1■□□□□ 0.97
Ubr2-201ENSMUST00000113335 Fkbp15Q6P9Q6 1216 aaKnown RBP21.1■□□□□ 0.97
Ubr2-201ENSMUST00000113335 Rad21Q61550 635 aaKnown RBP21.07■□□□□ 0.96
Ubr2-201ENSMUST00000113335 Cep164Q5DU05 1446 aa21.04■□□□□ 0.96
Ubr2-201ENSMUST00000113335 Gm13695A2AK44 830 aa21.04■□□□□ 0.96
Ubr2-201ENSMUST00000113335 Ccer2J3QPU5 274 aa21.01■□□□□ 0.95
Ubr2-201ENSMUST00000113335 Wdr43Q6ZQL4 677 aaKnown RBP21.01■□□□□ 0.95
Ubr2-201ENSMUST00000113335 Ythdc1E9Q5K9 736 aaKnown RBP21■□□□□ 0.95
Ubr2-201ENSMUST00000113335 Hdac5Q9Z2V6 1113 aa21■□□□□ 0.95
Ubr2-201ENSMUST00000113335 Mrs2Q5NCE8 434 aa20.98■□□□□ 0.95
Ubr2-201ENSMUST00000113335 Upf2A2AT37 1269 aaKnown RBP20.96■□□□□ 0.95
Ubr2-201ENSMUST00000113335 Chic2Q9D9G3 165 aa20.96■□□□□ 0.95
Ubr2-201ENSMUST00000113335 Brd4Q9ESU6 1400 aaKnown RBP20.95■□□□□ 0.94
Ubr2-201ENSMUST00000113335 CatipB9EKE5 520 aa20.95■□□□□ 0.94
Ubr2-201ENSMUST00000113335 Lmod3E9QA62 571 aa20.91■□□□□ 0.94
Ubr2-201ENSMUST00000113335 Hsp90aa1P07901 733 aaKnown RBP20.87■□□□□ 0.93
Ubr2-201ENSMUST00000113335 Abcc8B2RUS7 1588 aa20.85■□□□□ 0.93
Ubr2-201ENSMUST00000113335 DekQ7TNV0 380 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms