RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm16223Q8CBM3 117 aa16.34■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Gm28305F6U473 122 aa16.34■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Defa24Q5G865 93 aa16.34■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Aqp7O54794 303 aa16.33■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Mllt11P97783 90 aa16.33■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Ss18Q62280 418 aa16.33■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Chchd7Q8K2Q5 85 aa16.33■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Tmem263Q9DAM7 115 aa16.33■□□□□ 0.2
Scn1b-201ENSMUST00000098548 TtrP07309 147 aa16.32■□□□□ 0.2
Scn1b-201ENSMUST00000098548 4930596D02RikQ3V0H9 216 aa16.32■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Spag11Q8K4N2 71 aa16.32■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Cysltr1Q99JA4 352 aa16.32■□□□□ 0.2
Scn1b-201ENSMUST00000098548 B230217C12RikE9Q3Z1 139 aa16.31■□□□□ 0.2
Scn1b-201ENSMUST00000098548 B9d2Q3UK10 175 aa16.31■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Ammecr1lQ8JZZ6 310 aa16.31■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Tex48Q9DA81 110 aa16.31■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Trav6n-6A0A075B6B2 114 aa16.3■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Gm6040Q4QY32 63 aa16.3■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Uqcc3Q8K2T4 89 aa16.3■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Defb11Q8R2I7 77 aa16.3■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Mrpl35Q9CQL6 188 aa16.3■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Znf740Q6NZQ6 180 aa16.3■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Ifitm1Q9D103 106 aa16.3■□□□□ 0.2
Scn1b-201ENSMUST00000098548 6430550D23RikE9Q1X6 194 aa16.29■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Q9D8Q6 235 aa16.29■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Gm11027G8JL69 66 aa16.28■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Phxr5P08399 672 aa16.28■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Cox7a2lQ61387 111 aa16.28■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Ighv8-8A0A0A6YXQ0 119 aa16.27■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Ndufc2Q9CQ54 120 aa16.27■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Ssbp1Q9CYR0 152 aaKnown RBP16.27■□□□□ 0.2
Scn1b-201ENSMUST00000098548 Trav9n-2A0A0G2JDP3 113 aa16.26■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Trdv2-1A0A0G2JGB9 116 aa16.26■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Klk11Q9QYN3 276 aa16.26■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Kmt2aP55200 3966 aa16.26■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Trav7-2Q5R1I3 112 aa16.26■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Atp5lQ9CPQ8 103 aa16.26■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Rnf114Q9ET26 229 aa16.26■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Zcwpw2Q08EN7 125 aa16.25■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Trappc1Q5NCF2 145 aa16.25■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Snx22Q8C084 192 aa16.25■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Zmat5Q9CQR5 170 aa16.25■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Dnah14A0A140LIJ4 4489 aa16.24■□□□□ 0.19
Scn1b-201ENSMUST00000098548 A530064D06RikQ8BNV8 229 aa16.24■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Tcrg-C1A0A075B5Z0 172 aa16.23■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Tcrg-C3L7N479 172 aa16.23■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Gm4707V9GXN5 68 aa16.23■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Gm17359A0A0G2JEB7 487 aa16.22■□□□□ 0.19
Scn1b-201ENSMUST00000098548 TcraP01849 138 aa16.22■□□□□ 0.19
Scn1b-201ENSMUST00000098548 5930422O12RikQ8C4Y4 123 aa16.22■□□□□ 0.19
Scn1b-201ENSMUST00000098548 BC025920Q3US60 128 aa16.21■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Eif4ebp1Q60876 117 aa16.21■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Ndufs7Q9DC70 224 aa16.21■□□□□ 0.19
Scn1b-201ENSMUST00000098548 Trdv5A0A075B661 115 aa16.21■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Scgb1b11A0A087WQJ0 93 aa16.21■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Ccl17F6R5P4 103 aa16.21■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Timm17aQ9Z0V8 171 aa16.21■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Trbv13-1A0A0B4J1P8 112 aa16.2■□□□□ 0.18
Scn1b-201ENSMUST00000098548 P0C913 63 aa16.2■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Pmis2Q497Q9 96 aa16.2■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Phlda3Q9WV95 125 aa16.2■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Gm17349F7BGH6 99 aa16.19■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Slc25a20Q9Z2Z6 301 aaKnown RBP16.19■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Notch1Q01705 2531 aa16.19■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Scgb1b3J3QJY4 93 aa16.18■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Gm28051J3QMA2 81 aa16.18■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Gata1P17679 413 aa16.18■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Gata3P23772 443 aa16.18■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Tmem170bP86050 132 aa16.18■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Tmem101Q91VP7 257 aa16.17■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Gm17472A0A075B683 117 aa16.17■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Nop10Q9CQS2 64 aa16.17■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Igkv4-91A0A075B5L2 119 aa16.15■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Gm16442D3YZG3 307 aa16.15■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Defa35E9QLQ1 93 aa16.15■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Rpl36aP83882 106 aaKnown RBP16.15■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Higd1aQ9JLR9 95 aa16.15■□□□□ 0.18
Scn1b-201ENSMUST00000098548 Gpx1P11352 201 aa16.14■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Q8R092 253 aa16.14■□□□□ 0.17
Scn1b-201ENSMUST00000098548 P03985 172 aa16.13■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Dand5Q76LW6 185 aa16.13■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Q5BN45 167 aa16.13■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Ighv1-5A0A0A6YWG2 117 aa16.12■□□□□ 0.17
Scn1b-201ENSMUST00000098548 F11rO88792 300 aa16.12■□□□□ 0.17
Scn1b-201ENSMUST00000098548 P01794 123 aa16.12■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Rpl39P62892 51 aa16.12■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Gm10604Q3V0X7 143 aa16.11■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Gng7Q61016 68 aa16.11■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Ighv2-6-8A0A0A6YWY9 116 aa16.1■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Ighv8-12A0A0G2JDE1 119 aa16.1■□□□□ 0.17
Scn1b-201ENSMUST00000098548 A0A286YCQ8 80 aa16.1■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Spry2Q9QXV8 315 aa16.1■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Tspo2Q9CRZ8 162 aa16.09■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Hbb-bsA8DUK4 147 aa16.09■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Hbb-b1P02088 147 aa16.09■□□□□ 0.17
Scn1b-201ENSMUST00000098548 Klk9Q32M27 251 aa16.09■□□□□ 0.17
Scn1b-201ENSMUST00000098548 CrxO54751 299 aa16.08■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Ndufa3Q9CQ91 84 aa16.08■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Atxn7l1Q9CZ05 146 aa16.08■□□□□ 0.16
Scn1b-201ENSMUST00000098548 Ighv1-11A0A0A6YWI9 117 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 65.2 ms