RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Trav9-2A0A075B647 113 aa11.1□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Trav9-4A0A0B4J1K2 113 aa11.1□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Trav9n-2A0A0G2JDP3 113 aa11.1□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 FcorP0DJI6 106 aa11.1□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Ube2d3P61079 147 aa11.1□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Ube2d2P62838 147 aa11.1□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Nop10Q9CQS2 64 aa11.1□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Crlf1Q9JM58 425 aa11.1□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Defb26Q30KN7 186 aa11.09□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Ube2d1P61080 147 aaKnown RBP11.09□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 B430305J03RikQ8BQQ8 176 aa11.09□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Trav13n-2A0A0G2JF93 110 aa11.09□□□□□ -0.63
Pcdha1-201ENSMUST00000070797 Naa38Q9D2U5 125 aa11.08□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Prp2P05143 317 aa11.08□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Ros1Q78DX7 2340 aa11.08□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 EnhoQ8K1D8 76 aa11.08□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 PkdrejQ9Z0T6 2126 aa11.07□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Cfap46E9Q2C0 2641 aa11.07□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Gm10518F6UQQ9 182 aa11.07□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Zfand3Q497H0 227 aa11.07□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Trav9d-3A0A075B695 113 aa11.07□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Ly6hQ9WUC3 139 aa11.07□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Prr12E9PYL2 2035 aaKnown RBP11.07□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Ighv1-58A0A075B5W9 117 aa11.07□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Tln2Q71LX4 2375 aa11.06□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 CrygdP04342 174 aa11.06□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Ccl21aP84444 133 aa11.06□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Ccl21bP86792 133 aa11.06□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Ccl21cP86793 133 aa11.06□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Cep250Q60952 2414 aa11.06□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Ncor1Q60974 2453 aa11.06□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Ighv1-82A0A0G2JEU7 117 aa11.06□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Heatr5aQ5PRF0 2038 aa11.05□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Ube2d4D3YUH6 135 aa11.05□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Crip3Q6Q6R3 243 aa11.05□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Gm10542F6XDR3 90 aa11.05□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Sh2d1aO88890 126 aa11.05□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Gm2916Q9D9B9 127 aa11.05□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Trav13d-4A0A0G2JFX3 110 aa11.04□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Igkv1-122A0A140T8M9 119 aa11.04□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Klk12B2RVZ0 247 aa11.04□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 9130230L23RikQ8CC80 163 aa11.04□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Igkv8-34A0A0G2JDU0 121 aa11.04□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Prop1P97458 223 aa11.04□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Serp1Q9Z1W5 66 aa11.04□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 BlcapP62951 87 aa11.03□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Klk9Q32M27 251 aa11.03□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 A130051J06RikQ8CAU1 227 aa11.03□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Q9CX25 107 aa11.03□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Gm37988J3QM41 62 aa11.03□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Csdc2Q91YQ3 154 aa11.03□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Gm10553J3QPF1 123 aa11.03□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Spink4O35679 86 aa11.03□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Rnf152Q8BG47 203 aa11.03□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Tm2d2Q8R0I4 213 aa11.03□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 P01747 120 aa11.02□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Rnf114Q9ET26 229 aa11.02□□□□□ -0.64
Pcdha1-201ENSMUST00000070797 Trav13-1A0A075B644 110 aa11.02□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Cdip1Q9DB75 208 aa11.02□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Fgfbp3Q1HCM0 245 aa11.02□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 TshbP12656 138 aa11.01□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Trav13-4-dv7A0A075B6C2 110 aa11.01□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Edn2P22389 175 aa11.01□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 1110002E22RikE0CYV9 1786 aa11.01□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Gm7257D3YX25 99 aa11.01□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Gm4861Q8C5A4 106 aa11.01□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 P01820 115 aa11□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Gm10577Q3UDV9 132 aa11□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Ighv2-7A0A075B5Q8 116 aa11□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 SptssbQ925E8 76 aa11□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Asxl3Q8C4A5 2259 aa11□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 B230359F08RikA0A0B4J1K3 109 aa11□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 1520401A03RikA0A0J9YVH6 598 aa11□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Cox7a1P56392 80 aa11□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Gm19410A0A140LJC7 2098 aa10.99□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Ighv1-66A0A075B5X5 117 aa10.99□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 1810032O08RikE9PZV8 113 aa10.99□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Ighv1-5A0A0A6YWG2 117 aa10.99□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Ighv3-3A0A0A6YWL2 116 aa10.99□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Trav13-2A0A075B649 110 aa10.99□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Gm3618D3Z4P5 127 aa10.99□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Defb12Q8K4N3 78 aa10.99□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Spry2Q9QXV8 315 aa10.99□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Tet2Q4JK59 1912 aaKnown RBP10.99□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 5730596B20RikQ8BQ08 205 aa10.98□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Fam19a5Q91WE9 132 aa10.98□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 AtrxQ61687 2476 aaKnown RBP10.98□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Gm10322F7D7I4 111 aa10.98□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Polr2kQ63871 58 aa10.98□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Gm15557A6PWY0 234 aa10.98□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Med12A2AGH6 2190 aa10.98□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 4930470P17RikQ9D542 155 aa10.97□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Cox7b2Q9D2H1 82 aa10.97□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Usf3B2RUQ2 2221 aa10.96□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Arfgef3Q3UGY8 2170 aa10.96□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Igkv8-26A0A075B5N5 123 aa10.96□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Ighv10-1A0A0B4J1J6 119 aa10.96□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Spink13Q3UTS8 97 aa10.96□□□□□ -0.65
Pcdha1-201ENSMUST00000070797 Gm37389A0A0A6YW05 95 aa10.96□□□□□ -0.66
Pcdha1-201ENSMUST00000070797 SrarpQ3ULG3 163 aa10.96□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms