RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Zfand3Q497H0 227 aa13.24□□□□□ -0.29
Usp48-201ENSMUST00000055131 Trav4-3A0A0B4J1K1 110 aa13.24□□□□□ -0.29
Usp48-201ENSMUST00000055131 P84751 237 aa13.24□□□□□ -0.29
Usp48-201ENSMUST00000055131 Igkv1-35A0A0G2JDE5 120 aa13.24□□□□□ -0.29
Usp48-201ENSMUST00000055131 4930470P17RikQ9D542 155 aa13.24□□□□□ -0.29
Usp48-201ENSMUST00000055131 Rnase1P00683 149 aa13.23□□□□□ -0.29
Usp48-201ENSMUST00000055131 Reg3bP35230 175 aa13.23□□□□□ -0.29
Usp48-201ENSMUST00000055131 Tmem258P61166 79 aa13.22□□□□□ -0.29
Usp48-201ENSMUST00000055131 Spink8Q09TK9 105 aa13.22□□□□□ -0.29
Usp48-201ENSMUST00000055131 Arfgef3Q3UGY8 2170 aa13.22□□□□□ -0.29
Usp48-201ENSMUST00000055131 Dopey1Q8BL99 2399 aa13.22□□□□□ -0.29
Usp48-201ENSMUST00000055131 Gm21060J3KMU4 56 aa13.22□□□□□ -0.29
Usp48-201ENSMUST00000055131 Q9D131 166 aa13.22□□□□□ -0.29
Usp48-201ENSMUST00000055131 1700012A03RikQ9DAF1 130 aa13.22□□□□□ -0.29
Usp48-201ENSMUST00000055131 Spg11Q3UHA3 2430 aa13.22□□□□□ -0.29
Usp48-201ENSMUST00000055131 Igkv8-18A0A0B4J1J3 123 aa13.22□□□□□ -0.29
Usp48-201ENSMUST00000055131 Gm26602M0QWA4 95 aa13.21□□□□□ -0.29
Usp48-201ENSMUST00000055131 CrygdP04342 174 aa13.21□□□□□ -0.29
Usp48-201ENSMUST00000055131 P01747 120 aa13.21□□□□□ -0.29
Usp48-201ENSMUST00000055131 Sh2d1aO88890 126 aa13.21□□□□□ -0.29
Usp48-201ENSMUST00000055131 Obox8V9GWY9 217 aa13.21□□□□□ -0.29
Usp48-201ENSMUST00000055131 P06328 117 aa13.21□□□□□ -0.3
Usp48-201ENSMUST00000055131 Gm3618D3Z4P5 127 aa13.2□□□□□ -0.3
Usp48-201ENSMUST00000055131 Rpl18aP62717 176 aaKnown RBP13.2□□□□□ -0.3
Usp48-201ENSMUST00000055131 Parp4E9PYK3 1969 aa13.2□□□□□ -0.3
Usp48-201ENSMUST00000055131 Igkv3-5A0A140T8M6 119 aa13.2□□□□□ -0.3
Usp48-201ENSMUST00000055131 Trav11A0A0B4J1J9 114 aa13.2□□□□□ -0.3
Usp48-201ENSMUST00000055131 AW146154Q3TPQ7 468 aa13.19□□□□□ -0.3
Usp48-201ENSMUST00000055131 Gm17577J3QNF7 156 aa13.19□□□□□ -0.3
Usp48-201ENSMUST00000055131 Fgf6P21658 208 aa13.19□□□□□ -0.3
Usp48-201ENSMUST00000055131 Usf3B2RUQ2 2221 aa13.19□□□□□ -0.3
Usp48-201ENSMUST00000055131 Tmem223Q9CQE2 199 aaKnown RBP13.18□□□□□ -0.3
Usp48-201ENSMUST00000055131 Defb12Q8K4N3 78 aa13.18□□□□□ -0.3
Usp48-201ENSMUST00000055131 Brk1Q91VR8 75 aa13.18□□□□□ -0.3
Usp48-201ENSMUST00000055131 Trav9n-4A0A075B631 113 aa13.18□□□□□ -0.3
Usp48-201ENSMUST00000055131 P01674 108 aa13.18□□□□□ -0.3
Usp48-201ENSMUST00000055131 B9d2Q3UK10 175 aa13.18□□□□□ -0.3
Usp48-201ENSMUST00000055131 Tax1bp3Q9DBG9 124 aa13.18□□□□□ -0.3
Usp48-201ENSMUST00000055131 P0C913 63 aa13.17□□□□□ -0.3
Usp48-201ENSMUST00000055131 P01728 117 aa13.17□□□□□ -0.3
Usp48-201ENSMUST00000055131 P01820 115 aa13.17□□□□□ -0.3
Usp48-201ENSMUST00000055131 9430069I07RikQ9CX21 111 aa13.17□□□□□ -0.3
Usp48-201ENSMUST00000055131 Lce6aD3YV94 81 aa13.17□□□□□ -0.3
Usp48-201ENSMUST00000055131 Col24a1Q30D77 1733 aa13.17□□□□□ -0.3
Usp48-201ENSMUST00000055131 Wnk1P83741 2377 aa13.16□□□□□ -0.3
Usp48-201ENSMUST00000055131 1700010B08RikQ9DAI7 102 aa13.16□□□□□ -0.3
Usp48-201ENSMUST00000055131 Col4a6B1AVK5 1691 aa13.16□□□□□ -0.3
Usp48-201ENSMUST00000055131 Gm14137Q8CE97 175 aa13.16□□□□□ -0.3
Usp48-201ENSMUST00000055131 Snai3Q9QY31 287 aa13.16□□□□□ -0.3
Usp48-201ENSMUST00000055131 Gm10735Q3US96 136 aa13.16□□□□□ -0.3
Usp48-201ENSMUST00000055131 Ube2aQ9Z255 152 aa13.16□□□□□ -0.3
Usp48-201ENSMUST00000055131 Ndufa4l2Q4FZG9 87 aa13.15□□□□□ -0.3
Usp48-201ENSMUST00000055131 Gm44965A0A0N4SVR3 59 aa13.15□□□□□ -0.3
Usp48-201ENSMUST00000055131 Ramp1Q9WTJ5 148 aa13.15□□□□□ -0.3
Usp48-201ENSMUST00000055131 Zfyve26Q5DU37 2529 aa13.14□□□□□ -0.31
Usp48-201ENSMUST00000055131 Tet1Q3URK3 2007 aaKnown RBP13.14□□□□□ -0.31
Usp48-201ENSMUST00000055131 Ighv1-11A0A0A6YWI9 117 aa13.14□□□□□ -0.31
Usp48-201ENSMUST00000055131 Pip4p1Q3TWL2 284 aa13.14□□□□□ -0.31
Usp48-201ENSMUST00000055131 Rp1l1Q8CGM2 1859 aa13.13□□□□□ -0.31
Usp48-201ENSMUST00000055131 Dennd4cA6H8H2 1906 aa13.13□□□□□ -0.31
Usp48-201ENSMUST00000055131 Igkv3-10A0A0G2JGN0 119 aa13.13□□□□□ -0.31
Usp48-201ENSMUST00000055131 Ncoa6Q9JL19 2067 aa13.12□□□□□ -0.31
Usp48-201ENSMUST00000055131 Alms1Q8K4E0 3251 aa13.12□□□□□ -0.31
Usp48-201ENSMUST00000055131 BC107364E9Q5A2 140 aa13.12□□□□□ -0.31
Usp48-201ENSMUST00000055131 AcacbE9Q4Z2 2448 aa13.12□□□□□ -0.31
Usp48-201ENSMUST00000055131 Sprr3O09116 238 aa13.12□□□□□ -0.31
Usp48-201ENSMUST00000055131 Gm5468Q8C3D3 155 aa13.12□□□□□ -0.31
Usp48-201ENSMUST00000055131 Gm37389A0A0A6YW05 95 aa13.11□□□□□ -0.31
Usp48-201ENSMUST00000055131 Piezo1E2JF22 2547 aa13.11□□□□□ -0.31
Usp48-201ENSMUST00000055131 BikO70337 150 aa13.11□□□□□ -0.31
Usp48-201ENSMUST00000055131 Fam222aQ6PGH4 453 aa13.11□□□□□ -0.31
Usp48-201ENSMUST00000055131 Rpl39lQ9CQD0 51 aa13.11□□□□□ -0.31
Usp48-201ENSMUST00000055131 Spink4O35679 86 aa13.1□□□□□ -0.31
Usp48-201ENSMUST00000055131 Rif1Q6PR54 2419 aaKnown RBP13.1□□□□□ -0.31
Usp48-201ENSMUST00000055131 F5O88783 2183 aa13.1□□□□□ -0.31
Usp48-201ENSMUST00000055131 Gm5878E9PUB3 99 aa13.1□□□□□ -0.31
Usp48-201ENSMUST00000055131 Lmo4P61969 165 aa13.1□□□□□ -0.31
Usp48-201ENSMUST00000055131 Ighv8-12A0A0G2JDE1 119 aa13.1□□□□□ -0.31
Usp48-201ENSMUST00000055131 Triap1Q9D8Z2 76 aa13.1□□□□□ -0.31
Usp48-201ENSMUST00000055131 Mrpl52Q9D0Y8 121 aa13.09□□□□□ -0.31
Usp48-201ENSMUST00000055131 Acyp1P56376 99 aa13.09□□□□□ -0.31
Usp48-201ENSMUST00000055131 Q9CX25 107 aa13.09□□□□□ -0.31
Usp48-201ENSMUST00000055131 Wisp2Q9Z0G4 251 aa13.09□□□□□ -0.31
Usp48-201ENSMUST00000055131 Gphb5Q812B2 130 aa13.08□□□□□ -0.32
Usp48-201ENSMUST00000055131 NbasE9Q411 2356 aa13.08□□□□□ -0.32
Usp48-201ENSMUST00000055131 Cspg4Q8VHY0 2327 aa13.07□□□□□ -0.32
Usp48-201ENSMUST00000055131 Med13lQ6JPI3 2207 aa13.07□□□□□ -0.32
Usp48-201ENSMUST00000055131 Ighv1-85A0A075B5Y6 117 aa13.07□□□□□ -0.32
Usp48-201ENSMUST00000055131 Odf3Q920N1 254 aa13.07□□□□□ -0.32
Usp48-201ENSMUST00000055131 Prr12E9PYL2 2035 aaKnown RBP13.07□□□□□ -0.32
Usp48-201ENSMUST00000055131 Ighv1-75A0A075B5Y2 117 aa13.06□□□□□ -0.32
Usp48-201ENSMUST00000055131 Fxyd5P97808 178 aa13.06□□□□□ -0.32
Usp48-201ENSMUST00000055131 Ormdl1Q921I0 153 aa13.06□□□□□ -0.32
Usp48-201ENSMUST00000055131 CrygcQ61597 174 aa13.06□□□□□ -0.32
Usp48-201ENSMUST00000055131 E130116L18RikQ8BMV6 101 aa13.05□□□□□ -0.32
Usp48-201ENSMUST00000055131 Ighv1-82A0A0G2JEU7 117 aa13.05□□□□□ -0.32
Usp48-201ENSMUST00000055131 Ighv2-6A0A075B6A7 116 aa13.05□□□□□ -0.32
Usp48-201ENSMUST00000055131 P01659 112 aa13.04□□□□□ -0.32
Usp48-201ENSMUST00000055131 P18527 97 aa13.04□□□□□ -0.32
Usp48-201ENSMUST00000055131 Plxnb3Q9QY40 1902 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms