RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

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Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Rhox8Q6VSS7 320 aa30,85■■■□□ 2,53
Usp48-201ENSMUST00000055131 Ehmt2Q9Z148 1263 aaKnown RBP28,03■■■□□ 2,08
Usp48-201ENSMUST00000055131 Rpgrip1Q9EPQ2 1331 aa27,96■■■□□ 2,07
Usp48-201ENSMUST00000055131 Ccdc136Q3TVA9 1136 aa27,36■■□□□ 1,97
Usp48-201ENSMUST00000055131 Cngb1E1AZ71 1325 aa27,2■■□□□ 1,95
Usp48-201ENSMUST00000055131 Wdr66E9Q743 1299 aa27,19■■□□□ 1,94
Usp48-201ENSMUST00000055131 Esf1Q3V1V3 845 aaKnown RBP27,14■■□□□ 1,94
Usp48-201ENSMUST00000055131 Las1lA2BE28 776 aaKnown RBP27,03■■□□□ 1,92
Usp48-201ENSMUST00000055131 Gab3Q8BSM5 595 aa26,93■■□□□ 1,9
Usp48-201ENSMUST00000055131 Ube2uB1AUC4 352 aa26,92■■□□□ 1,9
Usp48-201ENSMUST00000055131 Zeb1Q64318 1117 aa26,91■■□□□ 1,9
Usp48-201ENSMUST00000055131 Npm2Q80W85 207 aa26,63■■□□□ 1,85
Usp48-201ENSMUST00000055131 Trim41Q5NCC3 630 aa26,55■■□□□ 1,84
Usp48-201ENSMUST00000055131 NischQ80TM9 1593 aa26,55■■□□□ 1,84
Usp48-201ENSMUST00000055131 Pelp1Q9DBD5 1123 aaKnown RBP26,5■■□□□ 1,83
Usp48-201ENSMUST00000055131 Myt1lP97500 1187 aa26,49■■□□□ 1,83
Usp48-201ENSMUST00000055131 UbtfP25976 765 aaKnown RBP25,98■■□□□ 1,75
Usp48-201ENSMUST00000055131 Acin1Q9JIX8 1338 aaKnown RBP25,96■■□□□ 1,75
Usp48-201ENSMUST00000055131 CenpbP27790 599 aa25,8■■□□□ 1,72
Usp48-201ENSMUST00000055131 NefmP08553 848 aa25,78■■□□□ 1,72
Usp48-201ENSMUST00000055131 Slc24a1Q91WD8 1130 aa25,77■■□□□ 1,72
Usp48-201ENSMUST00000055131 Amer1Q7TS75 1132 aa25,69■■□□□ 1,7
Usp48-201ENSMUST00000055131 Stra8P70278 393 aa25,55■■□□□ 1,68
Usp48-201ENSMUST00000055131 Abcc9P70170 1546 aa25,49■■□□□ 1,67
Usp48-201ENSMUST00000055131 Il27Q8K3I6 234 aa25,47■■□□□ 1,67
Usp48-201ENSMUST00000055131 Gm35339A0A140LHH9 1649 aa25,28■■□□□ 1,64
Usp48-201ENSMUST00000055131 Ccdc180J3QNE4 1664 aa25,26■■□□□ 1,63
Usp48-201ENSMUST00000055131 Cdk11bP24788 784 aaKnown RBP25,26■■□□□ 1,63
Usp48-201ENSMUST00000055131 HrcG5E8J6 738 aa25,24■■□□□ 1,63
Usp48-201ENSMUST00000055131 Ap3b1Q9Z1T1 1105 aa25,22■■□□□ 1,63
Usp48-201ENSMUST00000055131 Fam50aQ9WV03 339 aaKnown RBP25,14■■□□□ 1,62
Usp48-201ENSMUST00000055131 Neurod1Q60867 357 aa25,13■■□□□ 1,61
Usp48-201ENSMUST00000055131 Pcgf6Q99NA9 353 aa25,13■■□□□ 1,61
Usp48-201ENSMUST00000055131 Ppargc1bQ8VHJ7 1014 aa25,1■■□□□ 1,61
Usp48-201ENSMUST00000055131 Ttbk1Q6PCN3 1308 aa25,07■■□□□ 1,6
Usp48-201ENSMUST00000055131 NrdcQ8BHG1 1161 aa25,02■■□□□ 1,6
Usp48-201ENSMUST00000055131 NclP09405 707 aaKnown RBP25,01■■□□□ 1,59
Usp48-201ENSMUST00000055131 Nop58Q6DFW4 536 aaKnown RBP24,96■■□□□ 1,59
Usp48-201ENSMUST00000055131 Eif5bQ05D44 1216 aaKnown RBP24,95■■□□□ 1,58
Usp48-201ENSMUST00000055131 Zcchc6Q5BLK4 1491 aaKnown RBP24,94■■□□□ 1,58
Usp48-201ENSMUST00000055131 Anp32bQ9EST5 272 aaKnown RBP24,89■■□□□ 1,57
Usp48-201ENSMUST00000055131 Os9Q8K2C7 672 aa24,84■■□□□ 1,57
Usp48-201ENSMUST00000055131 4933416C03RikQ3V063 378 aa24,83■■□□□ 1,56
Usp48-201ENSMUST00000055131 Tnnt3Q9QZ47 272 aa24,82■■□□□ 1,56
Usp48-201ENSMUST00000055131 Rtl1Q7M732 1744 aa24,79■■□□□ 1,56
Usp48-201ENSMUST00000055131 NeflP08551 543 aa24,79■■□□□ 1,56
Usp48-201ENSMUST00000055131 Supt5hO55201 1082 aaKnown RBP24,77■■□□□ 1,56
Usp48-201ENSMUST00000055131 TonslQ6NZL6 1363 aa24,71■■□□□ 1,55
Usp48-201ENSMUST00000055131 Mier1Q5UAK0 511 aa24,58■■□□□ 1,52
Usp48-201ENSMUST00000055131 4930567H17RikQ3V0K5 233 aa24,57■■□□□ 1,52
Usp48-201ENSMUST00000055131 Zbtb7cQ8VCZ7 619 aa24,46■■□□□ 1,51
Usp48-201ENSMUST00000055131 Myt1Q8CFC2 1127 aa24,45■■□□□ 1,51
Usp48-201ENSMUST00000055131 Lmod2Q3UHZ5 550 aa24,41■■□□□ 1,5
Usp48-201ENSMUST00000055131 Plekhg3Q4VAC9 1341 aa24,33■■□□□ 1,49
Usp48-201ENSMUST00000055131 Hnrnpul2Q00PI9 745 aaKnown RBP24,23■■□□□ 1,47
Usp48-201ENSMUST00000055131 Abcc8B2RUS7 1588 aa24,21■■□□□ 1,47
Usp48-201ENSMUST00000055131 Npm1Q61937 292 aaKnown RBP24,2■■□□□ 1,46
Usp48-201ENSMUST00000055131 Zbtb4Q5F293 982 aa24,18■■□□□ 1,46
Usp48-201ENSMUST00000055131 ClspnQ80YR7 1315 aa24,13■■□□□ 1,45
Usp48-201ENSMUST00000055131 Chic1Q8CBW7 227 aa24,13■■□□□ 1,45
Usp48-201ENSMUST00000055131 Mapk8ip2Q9ERE9 830 aa24,12■■□□□ 1,45
Usp48-201ENSMUST00000055131 Ifnlr1Q8CGK5 535 aa24,1■■□□□ 1,45
Usp48-201ENSMUST00000055131 Rtl5Q5DTT4 599 aa24,08■■□□□ 1,45
Usp48-201ENSMUST00000055131 Gm13697A2AK42 830 aa24,03■■□□□ 1,44
Usp48-201ENSMUST00000055131 Erich6D3Z6S9 713 aa24■■□□□ 1,43
Usp48-201ENSMUST00000055131 Prdm10Q3UTQ7 1184 aa23,97■■□□□ 1,43
Usp48-201ENSMUST00000055131 Eid3Q3V124 375 aa23,97■■□□□ 1,43
Usp48-201ENSMUST00000055131 Anp32aO35381 247 aa23,96■■□□□ 1,43
Usp48-201ENSMUST00000055131 Nlrp6Q91WS2 869 aa23,93■■□□□ 1,42
Usp48-201ENSMUST00000055131 Atp1b4Q99ME6 356 aa23,91■■□□□ 1,42
Usp48-201ENSMUST00000055131 Gm38655A0A286YDK6 273 aa23,9■■□□□ 1,42
Usp48-201ENSMUST00000055131 DaxxO35613 739 aa23,89■■□□□ 1,41
Usp48-201ENSMUST00000055131 Polr3glQ8R0C0 218 aa23,86■■□□□ 1,41
Usp48-201ENSMUST00000055131 Fkbp15Q6P9Q6 1216 aaKnown RBP23,79■■□□□ 1,4
Usp48-201ENSMUST00000055131 ArxO35085 564 aa23,75■■□□□ 1,39
Usp48-201ENSMUST00000055131 Sall2Q9QX96 1004 aa23,75■■□□□ 1,39
Usp48-201ENSMUST00000055131 Clip1Q922J3 1391 aa23,74■■□□□ 1,39
Usp48-201ENSMUST00000055131 Csrnp3P59055 597 aa23,72■■□□□ 1,39
Usp48-201ENSMUST00000055131 Plppr3Q7TPB0 716 aa23,66■■□□□ 1,38
Usp48-201ENSMUST00000055131 Ubl4bQ9CQ84 188 aa23,63■■□□□ 1,37
Usp48-201ENSMUST00000055131 Gm13695A2AK44 830 aa23,63■■□□□ 1,37
Usp48-201ENSMUST00000055131 Brd4Q9ESU6 1400 aaKnown RBP23,56■■□□□ 1,36
Usp48-201ENSMUST00000055131 Rangap1P46061 589 aaKnown RBP23,52■■□□□ 1,36
Usp48-201ENSMUST00000055131 Anks4bQ8K3X6 423 aa23,52■■□□□ 1,36
Usp48-201ENSMUST00000055131 DiexfQ8BTT6 772 aaKnown RBP23,51■■□□□ 1,35
Usp48-201ENSMUST00000055131 Cep164Q5DU05 1446 aa23,49■■□□□ 1,35
Usp48-201ENSMUST00000055131 Chic2Q9D9G3 165 aa23,48■■□□□ 1,35
Usp48-201ENSMUST00000055131 Hdac5Q9Z2V6 1113 aa23,47■■□□□ 1,35
Usp48-201ENSMUST00000055131 Ppp4r2Q0VGB7 417 aa23,45■■□□□ 1,34
Usp48-201ENSMUST00000055131 Rad21Q61550 635 aaKnown RBP23,43■■□□□ 1,34
Usp48-201ENSMUST00000055131 Dcaf1Q80TR8 1506 aa23,43■■□□□ 1,34
Usp48-201ENSMUST00000055131 Calr4Q3TQS0 420 aa23,43■■□□□ 1,34
Usp48-201ENSMUST00000055131 Ccer2J3QPU5 274 aa23,41■■□□□ 1,34
Usp48-201ENSMUST00000055131 Rb1cc1Q9ESK9 1588 aa23,39■■□□□ 1,33
Usp48-201ENSMUST00000055131 Mrs2Q5NCE8 434 aa23,29■■□□□ 1,32
Usp48-201ENSMUST00000055131 Aplp2Q06335 707 aa23,29■■□□□ 1,32
Usp48-201ENSMUST00000055131 BlmO88700 1416 aa23,25■■□□□ 1,31
Usp48-201ENSMUST00000055131 Upf2A2AT37 1269 aaKnown RBP23,22■■□□□ 1,31
Usp48-201ENSMUST00000055131 Wdr43Q6ZQL4 677 aaKnown RBP23,18■■□□□ 1,3
Usp48-201ENSMUST00000055131 NacadQ5SWP3 1504 aa23,1■■□□□ 1,29
Retrieved 100 of 22,080 RNA–protein pairs in 10,7 ms