RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Rhox8Q6VSS7 320 aa30.85■■■□□ 2.53
Usp48-201ENSMUST00000055131 Ehmt2Q9Z148 1263 aaKnown RBP28.03■■■□□ 2.08
Usp48-201ENSMUST00000055131 Rpgrip1Q9EPQ2 1331 aa27.96■■■□□ 2.07
Usp48-201ENSMUST00000055131 Ccdc136Q3TVA9 1136 aa27.36■■□□□ 1.97
Usp48-201ENSMUST00000055131 Cngb1E1AZ71 1325 aa27.2■■□□□ 1.95
Usp48-201ENSMUST00000055131 Wdr66E9Q743 1299 aa27.19■■□□□ 1.94
Usp48-201ENSMUST00000055131 Esf1Q3V1V3 845 aaKnown RBP27.14■■□□□ 1.94
Usp48-201ENSMUST00000055131 Las1lA2BE28 776 aaKnown RBP27.03■■□□□ 1.92
Usp48-201ENSMUST00000055131 Gab3Q8BSM5 595 aa26.93■■□□□ 1.9
Usp48-201ENSMUST00000055131 Ube2uB1AUC4 352 aa26.92■■□□□ 1.9
Usp48-201ENSMUST00000055131 Zeb1Q64318 1117 aa26.91■■□□□ 1.9
Usp48-201ENSMUST00000055131 Npm2Q80W85 207 aa26.63■■□□□ 1.85
Usp48-201ENSMUST00000055131 Trim41Q5NCC3 630 aa26.55■■□□□ 1.84
Usp48-201ENSMUST00000055131 NischQ80TM9 1593 aa26.55■■□□□ 1.84
Usp48-201ENSMUST00000055131 Pelp1Q9DBD5 1123 aaKnown RBP26.5■■□□□ 1.83
Usp48-201ENSMUST00000055131 Myt1lP97500 1187 aa26.49■■□□□ 1.83
Usp48-201ENSMUST00000055131 UbtfP25976 765 aaKnown RBP25.98■■□□□ 1.75
Usp48-201ENSMUST00000055131 Acin1Q9JIX8 1338 aaKnown RBP25.96■■□□□ 1.75
Usp48-201ENSMUST00000055131 CenpbP27790 599 aa25.8■■□□□ 1.72
Usp48-201ENSMUST00000055131 NefmP08553 848 aa25.78■■□□□ 1.72
Usp48-201ENSMUST00000055131 Slc24a1Q91WD8 1130 aa25.77■■□□□ 1.72
Usp48-201ENSMUST00000055131 Amer1Q7TS75 1132 aa25.69■■□□□ 1.7
Usp48-201ENSMUST00000055131 Stra8P70278 393 aa25.55■■□□□ 1.68
Usp48-201ENSMUST00000055131 Abcc9P70170 1546 aa25.49■■□□□ 1.67
Usp48-201ENSMUST00000055131 Il27Q8K3I6 234 aa25.47■■□□□ 1.67
Usp48-201ENSMUST00000055131 Gm35339A0A140LHH9 1649 aa25.28■■□□□ 1.64
Usp48-201ENSMUST00000055131 Ccdc180J3QNE4 1664 aa25.26■■□□□ 1.63
Usp48-201ENSMUST00000055131 Cdk11bP24788 784 aaKnown RBP25.26■■□□□ 1.63
Usp48-201ENSMUST00000055131 HrcG5E8J6 738 aa25.24■■□□□ 1.63
Usp48-201ENSMUST00000055131 Ap3b1Q9Z1T1 1105 aa25.22■■□□□ 1.63
Usp48-201ENSMUST00000055131 Fam50aQ9WV03 339 aaKnown RBP25.14■■□□□ 1.62
Usp48-201ENSMUST00000055131 Neurod1Q60867 357 aa25.13■■□□□ 1.61
Usp48-201ENSMUST00000055131 Pcgf6Q99NA9 353 aa25.13■■□□□ 1.61
Usp48-201ENSMUST00000055131 Ppargc1bQ8VHJ7 1014 aa25.1■■□□□ 1.61
Usp48-201ENSMUST00000055131 Ttbk1Q6PCN3 1308 aa25.07■■□□□ 1.6
Usp48-201ENSMUST00000055131 NrdcQ8BHG1 1161 aa25.02■■□□□ 1.6
Usp48-201ENSMUST00000055131 NclP09405 707 aaKnown RBP25.01■■□□□ 1.59
Usp48-201ENSMUST00000055131 Nop58Q6DFW4 536 aaKnown RBP24.96■■□□□ 1.59
Usp48-201ENSMUST00000055131 Eif5bQ05D44 1216 aaKnown RBP24.95■■□□□ 1.58
Usp48-201ENSMUST00000055131 Zcchc6Q5BLK4 1491 aaKnown RBP24.94■■□□□ 1.58
Usp48-201ENSMUST00000055131 Anp32bQ9EST5 272 aaKnown RBP24.89■■□□□ 1.57
Usp48-201ENSMUST00000055131 Os9Q8K2C7 672 aa24.84■■□□□ 1.57
Usp48-201ENSMUST00000055131 4933416C03RikQ3V063 378 aa24.83■■□□□ 1.56
Usp48-201ENSMUST00000055131 Tnnt3Q9QZ47 272 aa24.82■■□□□ 1.56
Usp48-201ENSMUST00000055131 Rtl1Q7M732 1744 aa24.79■■□□□ 1.56
Usp48-201ENSMUST00000055131 NeflP08551 543 aa24.79■■□□□ 1.56
Usp48-201ENSMUST00000055131 Supt5hO55201 1082 aaKnown RBP24.77■■□□□ 1.56
Usp48-201ENSMUST00000055131 TonslQ6NZL6 1363 aa24.71■■□□□ 1.55
Usp48-201ENSMUST00000055131 Mier1Q5UAK0 511 aa24.58■■□□□ 1.52
Usp48-201ENSMUST00000055131 4930567H17RikQ3V0K5 233 aa24.57■■□□□ 1.52
Usp48-201ENSMUST00000055131 Zbtb7cQ8VCZ7 619 aa24.46■■□□□ 1.51
Usp48-201ENSMUST00000055131 Myt1Q8CFC2 1127 aa24.45■■□□□ 1.51
Usp48-201ENSMUST00000055131 Lmod2Q3UHZ5 550 aa24.41■■□□□ 1.5
Usp48-201ENSMUST00000055131 Plekhg3Q4VAC9 1341 aa24.33■■□□□ 1.49
Usp48-201ENSMUST00000055131 Hnrnpul2Q00PI9 745 aaKnown RBP24.23■■□□□ 1.47
Usp48-201ENSMUST00000055131 Abcc8B2RUS7 1588 aa24.21■■□□□ 1.47
Usp48-201ENSMUST00000055131 Npm1Q61937 292 aaKnown RBP24.2■■□□□ 1.46
Usp48-201ENSMUST00000055131 Zbtb4Q5F293 982 aa24.18■■□□□ 1.46
Usp48-201ENSMUST00000055131 ClspnQ80YR7 1315 aa24.13■■□□□ 1.45
Usp48-201ENSMUST00000055131 Chic1Q8CBW7 227 aa24.13■■□□□ 1.45
Usp48-201ENSMUST00000055131 Mapk8ip2Q9ERE9 830 aa24.12■■□□□ 1.45
Usp48-201ENSMUST00000055131 Ifnlr1Q8CGK5 535 aa24.1■■□□□ 1.45
Usp48-201ENSMUST00000055131 Rtl5Q5DTT4 599 aa24.08■■□□□ 1.45
Usp48-201ENSMUST00000055131 Gm13697A2AK42 830 aa24.03■■□□□ 1.44
Usp48-201ENSMUST00000055131 Erich6D3Z6S9 713 aa24■■□□□ 1.43
Usp48-201ENSMUST00000055131 Prdm10Q3UTQ7 1184 aa23.97■■□□□ 1.43
Usp48-201ENSMUST00000055131 Eid3Q3V124 375 aa23.97■■□□□ 1.43
Usp48-201ENSMUST00000055131 Anp32aO35381 247 aa23.96■■□□□ 1.43
Usp48-201ENSMUST00000055131 Nlrp6Q91WS2 869 aa23.93■■□□□ 1.42
Usp48-201ENSMUST00000055131 Atp1b4Q99ME6 356 aa23.91■■□□□ 1.42
Usp48-201ENSMUST00000055131 Gm38655A0A286YDK6 273 aa23.9■■□□□ 1.42
Usp48-201ENSMUST00000055131 DaxxO35613 739 aa23.89■■□□□ 1.41
Usp48-201ENSMUST00000055131 Polr3glQ8R0C0 218 aa23.86■■□□□ 1.41
Usp48-201ENSMUST00000055131 Fkbp15Q6P9Q6 1216 aaKnown RBP23.79■■□□□ 1.4
Usp48-201ENSMUST00000055131 ArxO35085 564 aa23.75■■□□□ 1.39
Usp48-201ENSMUST00000055131 Sall2Q9QX96 1004 aa23.75■■□□□ 1.39
Usp48-201ENSMUST00000055131 Clip1Q922J3 1391 aa23.74■■□□□ 1.39
Usp48-201ENSMUST00000055131 Csrnp3P59055 597 aa23.72■■□□□ 1.39
Usp48-201ENSMUST00000055131 Plppr3Q7TPB0 716 aa23.66■■□□□ 1.38
Usp48-201ENSMUST00000055131 Ubl4bQ9CQ84 188 aa23.63■■□□□ 1.37
Usp48-201ENSMUST00000055131 Gm13695A2AK44 830 aa23.63■■□□□ 1.37
Usp48-201ENSMUST00000055131 Brd4Q9ESU6 1400 aaKnown RBP23.56■■□□□ 1.36
Usp48-201ENSMUST00000055131 Rangap1P46061 589 aaKnown RBP23.52■■□□□ 1.36
Usp48-201ENSMUST00000055131 Anks4bQ8K3X6 423 aa23.52■■□□□ 1.36
Usp48-201ENSMUST00000055131 DiexfQ8BTT6 772 aaKnown RBP23.51■■□□□ 1.35
Usp48-201ENSMUST00000055131 Cep164Q5DU05 1446 aa23.49■■□□□ 1.35
Usp48-201ENSMUST00000055131 Chic2Q9D9G3 165 aa23.48■■□□□ 1.35
Usp48-201ENSMUST00000055131 Hdac5Q9Z2V6 1113 aa23.47■■□□□ 1.35
Usp48-201ENSMUST00000055131 Ppp4r2Q0VGB7 417 aa23.45■■□□□ 1.34
Usp48-201ENSMUST00000055131 Rad21Q61550 635 aaKnown RBP23.43■■□□□ 1.34
Usp48-201ENSMUST00000055131 Dcaf1Q80TR8 1506 aa23.43■■□□□ 1.34
Usp48-201ENSMUST00000055131 Calr4Q3TQS0 420 aa23.43■■□□□ 1.34
Usp48-201ENSMUST00000055131 Ccer2J3QPU5 274 aa23.41■■□□□ 1.34
Usp48-201ENSMUST00000055131 Rb1cc1Q9ESK9 1588 aa23.39■■□□□ 1.33
Usp48-201ENSMUST00000055131 Mrs2Q5NCE8 434 aa23.29■■□□□ 1.32
Usp48-201ENSMUST00000055131 Aplp2Q06335 707 aa23.29■■□□□ 1.32
Usp48-201ENSMUST00000055131 BlmO88700 1416 aa23.25■■□□□ 1.31
Usp48-201ENSMUST00000055131 Upf2A2AT37 1269 aaKnown RBP23.22■■□□□ 1.31
Usp48-201ENSMUST00000055131 Wdr43Q6ZQL4 677 aaKnown RBP23.18■■□□□ 1.3
Usp48-201ENSMUST00000055131 NacadQ5SWP3 1504 aa23.1■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms