RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 RetnQ99P87 114 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Zfhx3Q61329 3726 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Trank1Q8BV79 2999 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Srp14P16254 110 aaKnown RBP8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 C1qcQ02105 246 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Gm4861Q8C5A4 106 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Gm7849D3YX03 116 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Gm5878E9PUB3 99 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Cdip1Q9DB75 208 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Pgpep1lQ9CWB5 130 aa8.54□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Smg1Q8BKX6 3658 aaKnown RBP8.54□□□□□ -1.04
Topbp1-201ENSMUST00000035164 1700056E22RikF7CNM6 234 aa8.54□□□□□ -1.04
Topbp1-201ENSMUST00000035164 FcorP0DJI6 106 aa8.54□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Gata4Q08369 441 aa8.54□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Lyzl4Q9D925 145 aa8.54□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Ndufs7Q9DC70 224 aa8.54□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Mettl26Q9DCS2 204 aa8.54□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Smim10l1A0A087WNQ7 89 aa8.53□□□□□ -1.04
Topbp1-201ENSMUST00000035164 A130051J06RikQ8CAU1 227 aa8.53□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Crip2Q9DCT8 208 aaKnown RBP8.53□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Ighv1-50A0A075B5W1 117 aa8.53□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Ighv1-64A0A075B5X3 117 aa8.53□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Gm867A0A1W2P7T4 151 aa8.53□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Lgals4Q8K419 326 aa8.53□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Zfp462B1AWL2 2495 aaKnown RBP8.52□□□□□ -1.04
Topbp1-201ENSMUST00000035164 MsmbO08540 113 aa8.52□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Igfn1Q3KNY0 2849 aa8.52□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Trdv5A0A075B661 115 aa8.52□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Ube2d1P61080 147 aaKnown RBP8.52□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Foxc1Q61572 553 aa8.52□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Gm3285A0A1W2P7U0 201 aa8.52□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Defa4P28311 92 aa8.52□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Msrb2Q78J03 175 aa8.52□□□□□ -1.05
Topbp1-201ENSMUST00000035164 LeprotO89013 131 aa8.52□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Prelid3aQ8VE85 172 aa8.52□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Wdr38Q9D994 303 aa8.52□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Ly86O88188 162 aa8.51□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Cxcl14Q9WUQ5 99 aa8.51□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Phlda3Q9WV95 125 aa8.51□□□□□ -1.05
Topbp1-201ENSMUST00000035164 P01753 117 aa8.51□□□□□ -1.05
Topbp1-201ENSMUST00000035164 P01802 115 aa8.51□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Srsf2Q62093 221 aaKnown RBP8.51□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Atp6v0e2Q91XE7 81 aa8.51□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Ighv1-12A0A0A6YXJ9 117 aa8.51□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Rnf183Q8QZS5 190 aa8.51□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Tmem263Q9DAM7 115 aa8.51□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Pfn2Q9JJV2 140 aa8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 LhbO09108 141 aa8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Defa7P50705 93 aa8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 1500011B03RikQ3TTH7 73 aa8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Usmg5Q78IK2 58 aa8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Spink12Q9D256 87 aa8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Gm15557A6PWY0 234 aa8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Ndufb4Q9CQC7 129 aa8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 TrrapQ80YV3 2565 aaKnown RBP8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Gm20726G3UX18 150 aa8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Ube2e2Q91W82 201 aa8.5□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Ighv3-1A0A075B5S6 116 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Ighv8-5A0A0A6YY60 119 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Gm10135F6TEE5 83 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Trav13n-1A0A0G2JEU8 110 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 CnfnQ6PCW6 111 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Cyyr1Q8VIH7 165 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Trav9-2A0A075B647 113 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Trav9-4A0A0B4J1K2 113 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Glrp1E9Q9S8 174 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Znf575Q3TXZ1 239 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Tmem101Q91VP7 257 aa8.49□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Igkv4-59A0A0B4J1I8 117 aa8.48□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Gm6793B2RXM2 351 aa8.48□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Smlr1J3QMJ4 66 aa8.48□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Timm17aQ9Z0V8 171 aa8.48□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Gm20499D3Z4G5 72 aa8.48□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Ube2d3P61079 147 aa8.47□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Ube2d2P62838 147 aa8.47□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Igkv4-71A0A0G2JEH0 117 aa8.47□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Gm5464Q3UY29 175 aa8.47□□□□□ -1.05
Topbp1-201ENSMUST00000035164 BC048562Q80ZQ7 204 aa8.47□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Bles03Q8VD62 251 aa8.47□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Defb29Q8BGW9 78 aa8.47□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Gm28539A0A087WSL9 92 aa8.47□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Gatd1Q8BFQ8 220 aa8.47□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Atp5g1Q9CR84 136 aa8.47□□□□□ -1.05
Topbp1-201ENSMUST00000035164 Polr2kQ63871 58 aa8.46□□□□□ -1.05
Topbp1-201ENSMUST00000035164 H1fxQ80ZM5 188 aa8.46□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Ighv5-8A0A075B676 92 aa8.46□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Gm7257D3YX25 99 aa8.46□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Mfap4Q9D1H9 257 aa8.46□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Trav9n-2A0A0G2JDP3 113 aa8.45□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Ss18Q62280 418 aa8.45□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Dkk4Q8VEJ3 221 aa8.45□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Gm10542F6XDR3 90 aa8.45□□□□□ -1.06
Topbp1-201ENSMUST00000035164 GalmQ8K157 342 aa8.45□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Spry2Q9QXV8 315 aa8.45□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Synj2bpQ9D6K5 145 aa8.45□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Wfdc11A2A5H7 82 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Gm7102J3QQ10 178 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Gm904Q3V2L5 102 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Cfap126Q6P8X9 189 aa8.44□□□□□ -1.06
Topbp1-201ENSMUST00000035164 Igkv4-70A0A0B4J1I5 116 aa8.44□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 100.5 ms