RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 A230072I06RikQ3UUJ8 172 aa8.16□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Ifitm2Q99J93 144 aa8.16□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Ube2e1P52482 193 aa8.16□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Rnf185Q91YT2 192 aa8.16□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Cfc1P97766 202 aa8.16□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Map6d1Q14BB9 191 aa8.16□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Gm17334Q8C6U3 126 aa8.16□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Bub3Q9WVA3 326 aa8.16□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Gm10542F6XDR3 90 aa8.15□□□□□ -1.1
Rnf40-201ENSMUST00000033088 BlcapP62951 87 aa8.15□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Tmem243B2RVB9 118 aa8.15□□□□□ -1.1
Rnf40-201ENSMUST00000033088 LoxP28301 411 aa8.15□□□□□ -1.1
Rnf40-201ENSMUST00000033088 SrarpQ3ULG3 163 aa8.15□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Tmem210Q9D2F0 147 aa8.15□□□□□ -1.1
Rnf40-201ENSMUST00000033088 RhohQ9D3G9 191 aa8.15□□□□□ -1.1
Rnf40-201ENSMUST00000033088 Gm28539A0A087WSL9 92 aa8.15□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Brk1Q91VR8 75 aa8.15□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Morn5Q9DAI9 170 aa8.15□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Muc5acE9QAQ8 3455 aa8.15□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Trav9n-2A0A0G2JDP3 113 aa8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Ighv1-23A0A0A6YVW3 117 aa8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 CdsnQ7TPC1 561 aa8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 BB014433Q8C5R5 389 aa8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Fam216bQ8CC14 138 aa8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Snai3Q9QY31 287 aa8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Hcfc1Q61191 2045 aaKnown RBP8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Trav13n-2A0A0G2JF93 110 aa8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Gm904Q3V2L5 102 aa8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Gm5941Q497P9 117 aa8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 A130051J06RikQ8CAU1 227 aa8.14□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Igkv4-74A0A0B4J1I3 119 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Igkv4-68A0A0B4J1I7 117 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Glrp1E9Q9S8 174 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Ighv3-6P18531 116 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Minos1Q7TNS2 76 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Tmem14cQ9CQN6 114 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Igkv4-57-1A0A075B5M4 119 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Ighv1-74A0A0G2JGK2 117 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 SelenowP63300 88 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Dkk4Q8VEJ3 221 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Cyyr1Q8VIH7 165 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Tmem89Q9DA04 169 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Tmem263Q9DAM7 115 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Unc79Q0KK59 2596 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Zfhx4Q9JJN2 3550 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Ighv2-6A0A075B6A7 116 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Igkv4-53A0A0G2JFC6 119 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Rpl35aO55142 110 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 P01802 115 aa8.13□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Ndufa12Q7TMF3 145 aaKnown RBP8.12□□□□□ -1.11
Rnf40-201ENSMUST00000033088 H1fxQ80ZM5 188 aa8.12□□□□□ -1.11
Rnf40-201ENSMUST00000033088 P01643 108 aa8.12□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Pglyrp4Q0VB07 374 aa8.12□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Cd99Q8VCN6 175 aa8.12□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Chchd5Q9CQP3 110 aa8.12□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Trav9-2A0A075B647 113 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Trav9-4A0A0B4J1K2 113 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 P04944 107 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 MifP34884 115 aaKnown RBP8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Q8R092 253 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 B230359F08RikA0A0B4J1K3 109 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Rpl32P62911 135 aaKnown RBP8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Fhl1P97447 280 aaKnown RBP8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Gm9958Q8C9U4 106 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Defb12Q8K4N3 78 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Crip2Q9DCT8 208 aaKnown RBP8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Trav13-1A0A075B644 110 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Igf1P05017 153 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 AW146154Q3TPQ7 468 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Crip3Q6Q6R3 243 aa8.11□□□□□ -1.11
Rnf40-201ENSMUST00000033088 P01753 117 aa8.1□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Ndufa4l2Q4FZG9 87 aa8.1□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Tmem30bQ8BHG3 353 aa8.1□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Gm3618D3Z4P5 127 aa8.1□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Gm2916Q9D9B9 127 aa8.1□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Trav9d-3A0A075B695 113 aa8.1□□□□□ -1.11
Rnf40-201ENSMUST00000033088 P01630 113 aa8.1□□□□□ -1.11
Rnf40-201ENSMUST00000033088 P01750 117 aa8.1□□□□□ -1.11
Rnf40-201ENSMUST00000033088 TshbP12656 138 aa8.1□□□□□ -1.11
Rnf40-201ENSMUST00000033088 Vwc2lQ505H4 222 aa8.1□□□□□ -1.11
Rnf40-201ENSMUST00000033088 MalO09198 153 aa8.09□□□□□ -1.12
Rnf40-201ENSMUST00000033088 FcorP0DJI6 106 aa8.09□□□□□ -1.12
Rnf40-201ENSMUST00000033088 C1qcQ02105 246 aa8.09□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ighv8-12A0A0G2JDE1 119 aa8.08□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Fam222aQ6PGH4 453 aa8.08□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Synj2bpQ9D6K5 145 aa8.08□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Gm815Q3UWS2 115 aa8.08□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Fam110aQ8R184 296 aa8.08□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Igkv2-109A0A075B5K6 120 aa8.08□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Trav4n-4A0A075B615 110 aa8.08□□□□□ -1.12
Rnf40-201ENSMUST00000033088 P06328 117 aa8.08□□□□□ -1.12
Rnf40-201ENSMUST00000033088 HrnrQ8VHD8 2496 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ighv8-11A0A075B5X4 119 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Trav14d-3-dv8A0A075B619 120 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 LeprotO89013 131 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Gm5629P06327 117 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Trav13-2A0A075B649 110 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Trav13-4-dv7A0A075B6C2 110 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ighv1-72P01751 139 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Gm26566Q8CAC1 153 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms