RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Armcx4E9PWM3 2356 aa13.13□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Tln1P26039 2541 aaKnown RBP13.13□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Rmi2Q3UPE3 149 aa13.13□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Apoc4Q61268 124 aa13.13□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Wfdc11A2A5H7 82 aa13.13□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Tcf15Q60756 195 aa13.13□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 4930415O20RikQ8CDT5 131 aa13.13□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 RetnQ99P87 114 aa13.13□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Qrich2A0A140LIY9 2337 aa13.12□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Igkv4-69A0A0B4J1I6 116 aa13.12□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Gm17455G3UW87 128 aa13.12□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Fam208bQ5DTT3 2382 aa13.12□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Ptprz1B9EKR1 2312 aa13.12□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Dkk4Q8VEJ3 221 aa13.12□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Med13lQ6JPI3 2207 aa13.12□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Defa1P11477 93 aa13.11□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Gm9887F6RFI0 207 aa13.11□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Eif4ebp1Q60876 117 aa13.11□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Ighv2-6-8A0A0A6YWY9 116 aa13.1□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Glrp1E9Q9S8 174 aa13.1□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Mob4Q6PEB6 225 aa13.1□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Ifitm1Q9D103 106 aa13.1□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Gm9970F6ZED4 185 aa13.1□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Gm9922Q8C3P1 144 aa13.1□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 SetxA2AKX3 2646 aa13.1□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Smim10l1A0A087WNQ7 89 aa13.09□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 OdaphJ3QNT8 126 aa13.09□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Casp6O08738 276 aa13.09□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Defa26Q3L180 93 aa13.09□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Prr9Q8BV84 116 aa13.09□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Gm20730A0A075B5J6 119 aa13.09□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 3110070M22RikQ9DAQ7 118 aa13.08□□□□□ -0.31
Sqstm1-201ENSMUST00000015981 Igkv4-62A0A0G2JDW9 117 aa13.08□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Gm15557A6PWY0 234 aa13.07□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Defa2P28309 93 aa13.07□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Ash1lQ99MY8 2958 aa13.07□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Trav6-4A0A075B6B4 115 aa13.07□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 P06329 120 aa13.07□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 SpinklQ8CEK3 90 aa13.06□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Ly86O88188 162 aa13.06□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Msrb2Q78J03 175 aa13.06□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 H1fxQ80ZM5 188 aa13.06□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Ndufa11Q9D8B4 141 aa13.06□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Timm17bQ9Z0V7 172 aa13.06□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Adgrg4B7ZCC9 3073 aa13.06□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Spag11Q8K4N2 71 aa13.06□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Lama5Q61001 3718 aa13.05□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Defa16P50714 93 aa13.05□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Eif4ebp3Q80VV3 101 aa13.05□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Gatd1Q8BFQ8 220 aa13.05□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Gm4861Q8C5A4 106 aa13.05□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Spry2Q9QXV8 315 aa13.05□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Pgpep1lQ9CWB5 130 aa13.04□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Ighv1-63A0A075B5X2 117 aa13.04□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Trav4-3A0A0B4J1K1 110 aa13.03□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 3110018I06RikQ9CXS0 120 aa13.03□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Csdc2Q91YQ3 154 aa13.03□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Fam216aQ9DB54 251 aa13.03□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 GalmQ8K157 342 aa13.02□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Krtap26-1Q9D7N2 215 aa13.02□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Esm1Q9QYY7 184 aa13.02□□□□□ -0.32
Sqstm1-201ENSMUST00000015981 Trav13d-1A0A075B606 110 aa13.02□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Ubtd1Q91WB7 227 aa13.02□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 4930432M17RikQ3V0W9 174 aa13.01□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Cd164l2Q9D6W7 172 aa13.01□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Ndufs7Q9DC70 224 aa13.01□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Krtap27-1E9PX37 202 aa13.01□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Gm11020F6ZGD5 61 aa13.01□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 TeppQ6IMH0 216 aa13□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Prelid3aQ8VE85 172 aa13□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Znf580Q9DB38 172 aa13□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Rnf183Q8QZS5 190 aa13□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Gm3285A0A1W2P7U0 201 aa12.99□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Lmo4P61969 165 aa12.99□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Prss58Q8BW11 241 aa12.99□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Phpt1Q9DAK9 124 aa12.99□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Gm5089A1L3C8 106 aa12.99□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Defa25Q5G864 92 aa12.99□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Trav14d-3-dv8A0A075B619 120 aa12.98□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 P01753 117 aa12.98□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Pla2g2aP31482 146 aa12.98□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Fgf23Q9EPC2 251 aa12.98□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 ScxQ64124 207 aa12.98□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Gm9747Q810H1 104 aa12.98□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 AI854703Q8BIN3 203 aa12.98□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Cmya5Q70KF4 3739 aa12.98□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Edn2P22389 175 aa12.97□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Znf740Q6NZQ6 180 aa12.97□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 HampQ9EQ21 83 aa12.97□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Zfp292Q9Z2U2 2698 aa12.97□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Arid1bE9Q4N7 2244 aa12.97□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Cela2aP05208 271 aa12.96□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Ly6hQ9WUC3 139 aa12.96□□□□□ -0.33
Sqstm1-201ENSMUST00000015981 Znf414Q9DCK4 299 aa12.96□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Usmg5Q78IK2 58 aa12.95□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Svep1A2AVA0 3567 aa12.95□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Muc4Q8JZM8 3443 aa12.94□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 MsmbO08540 113 aa12.94□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Snrpd3P62320 126 aaKnown RBP12.94□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 BlcapP62951 87 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms