RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Ccl19O70460 108 aa9.8□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 P01786 117 aa9.8□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 TcraP01849 138 aa9.8□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Cfc1P97766 202 aa9.8□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Defb26Q30KN7 186 aa9.8□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Col7a1Q63870 2944 aa9.8□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Tex48Q9DA81 110 aa9.8□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 FlnaQ8BTM8 2647 aaKnown RBP9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 NpsP0C0P8 89 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 4930596D02RikQ3V0H9 216 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Trav7d-3Q5R1I1 112 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Ammecr1lQ8JZZ6 310 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Gm29666A0A087WQ99 126 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Ndufa1O35683 70 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 P01794 123 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Gm6040Q4QY32 63 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Vmn1r197Q8R265 298 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Foxi1Q922I5 372 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 SelenokQ9JLJ1 94 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Hivep2Q3UHF7 2430 aa9.79□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 LrbaQ9ESE1 2856 aa9.78□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Smim10l1A0A087WNQ7 89 aa9.78□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 March3Q8BRX9 218 aa9.78□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Defa22Q8C1N8 93 aa9.78□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Gm10490F6VBM2 120 aa9.77□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Gm10509O88255 85 aa9.77□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Fgfbp3Q1HCM0 245 aa9.77□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Fam110dQ80X91 271 aa9.77□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Cd99Q8VCN6 175 aa9.77□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Ube2v1Q9CZY3 147 aa9.77□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Ifitm1Q9D103 106 aa9.77□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 4930470P17RikQ9D542 155 aa9.77□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Gnb1lQ9EQ15 326 aa9.77□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 S100a8P27005 89 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Htr1dQ61224 374 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 TirapQ99JY1 241 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Timm17aQ9Z0V8 171 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Ighv6-7A0A0A6YWU3 119 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Gm7075D3Z497 112 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Defa30E9QPZ2 93 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 TtrP07309 147 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Fxyd7P59648 80 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Mllt11P97783 90 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Avpi1Q9D7H4 142 aa9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Crip2Q9DCT8 208 aaKnown RBP9.76□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Ighv1-5A0A0A6YWG2 117 aa9.75□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Tmem170bP86050 132 aa9.75□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Tal2Q62282 108 aa9.75□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Q99M08 65 aa9.75□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Pdzd2E9Q1M1 2796 aa9.75□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Rif1Q6PR54 2419 aaKnown RBP9.75□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 P18527 97 aa9.74□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Fxyd5P97808 178 aa9.74□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 8030423J24RikQ9CX45 142 aa9.74□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Smim13E9Q942 88 aa9.73□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 P01837 106 aa9.73□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Fgf6P21658 208 aa9.73□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Defa6P50704 93 aa9.73□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Lyrm9Q3UN90 78 aa9.73□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Prr3Q811B5 190 aaKnown RBP9.73□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Trbv13-1A0A0B4J1P8 112 aa9.73□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 B230217C12RikE9Q3Z1 139 aa9.73□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Smr3aQ61900 147 aa9.73□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Mustn1Q99JI1 82 aa9.73□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Myo9aQ8C170 2542 aa9.72□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Nf1Q04690 2841 aa9.72□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Ss18Q62280 418 aa9.72□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Gm9922Q8C3P1 144 aa9.72□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Il19Q8CJ70 176 aa9.72□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Tm4sf20Q9CQY8 226 aa9.72□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Fam240aJ3QNP9 97 aa9.71□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Tcrg-C3L7N479 172 aa9.71□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 P01738 130 aa9.71□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 P03985 172 aa9.71□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Erg28Q9ERY9 140 aa9.71□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 PerpQ9JK95 193 aa9.71□□□□□ -0.85
Pdlim5-208ENSMUST00000196220 Ighv1-62-2A0A0A6YXZ4 119 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 AngP21570 145 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Rpl39P62892 51 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Spag11Q8K4N2 71 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 PpdpfQ9CR37 115 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Chd6A3KFM7 2711 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 BC107364E9Q5A2 140 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Vamp8O70404 101 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Gm815Q3UWS2 115 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Eif4ebp1Q60876 117 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Mapk1ip1lQ8BH93 242 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 A530064D06RikQ8BNV8 229 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Morn3Q8C5T4 241 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Gm10295Q8CCF3 114 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Higd1aQ9JLR9 95 aa9.7□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Trav4n-4A0A075B615 110 aa9.69□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Ighv2-6-8A0A0A6YWY9 116 aa9.69□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Defa34D3Z0J0 93 aa9.69□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Defa37K9J724 93 aa9.69□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 F11rO88792 300 aa9.69□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Smim1P0C8K7 78 aa9.69□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Defa5P28312 93 aa9.69□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Q5BN45 167 aa9.69□□□□□ -0.86
Pdlim5-208ENSMUST00000196220 Defb42Q8BVB5 75 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 70 ms