RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Ighv1-23A0A0A6YVW3 117 aa10.04□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Olfr312Q7TRZ9 308 aa10.04□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Mrpl36Q99N90 102 aa10.04□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Snai3Q9QY31 287 aa10.04□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Ighv1-9A0A0A6YW37 117 aa10.04□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Ndufa1O35683 70 aa10.04□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Csn3P06796 181 aa10.04□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Gm26938S4R185 226 aa10.04□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Hspg2Q05793 3707 aaKnown RBP10.04□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Gm44965A0A0N4SVR3 59 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Gm10271F6WY25 52 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 TshbP12656 138 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Tmem170bP86050 132 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Iglc1A0A0G2JE99 106 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Tmem238lA0A1B0GS74 79 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Esp3J3QN49 87 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 P01739 132 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 P01843 105 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Gm21370Q3T9V6 190 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Spink13Q3UTS8 97 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Gm3250E9Q1M3 230 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Srp14P16254 110 aaKnown RBP10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Mapk1ip1lQ8BH93 242 aa10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Rbmxl2Q9DAE2 385 aaKnown RBP10.03□□□□□ -0.8
Rnf4-204ENSMUST00000182047 Ighv1-52A0A0A6YXC3 117 aa10.02□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Gm5464Q3UY29 175 aa10.02□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Gm14137Q8CE97 175 aa10.02□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Obox1Q9D350 204 aa10.02□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Trbv17A0A140T8P8 114 aa10.02□□□□□ -0.81
Rnf4-204ENSMUST00000182047 P01750 117 aa10.02□□□□□ -0.81
Rnf4-204ENSMUST00000182047 P06334 169 aa10.02□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Hoxd3P09027 433 aa10.02□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Psmg4P0C7N9 123 aa10.02□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Ube2e2Q91W82 201 aa10.02□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Umad1E0CX23 159 aa10.01□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Crip3Q6Q6R3 243 aa10.01□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Pcp4P63054 62 aa10.01□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Tex26Q0VB26 296 aa10.01□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Chac1Q8R3J5 223 aa10.01□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Mustn1Q99JI1 82 aa10.01□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Igkv2-137A0A0B4J1H6 120 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Igkv4-69A0A0B4J1I6 116 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Mrps12O35680 139 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Q9DAB9 146 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 4930447F04RikA2AFR2 126 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Hbb-bsA8DUK4 147 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Fam240aJ3QNP9 97 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Hbb-b1P02088 147 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Cdx4Q07424 282 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 CnfnQ6PCW6 111 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Gm28269A0A087WSG3 125 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 P01747 120 aa10□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Ighv14-1A0A075B5R4 117 aa9.99□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Ighv1-64A0A075B5X3 117 aa9.99□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Ighv1-12A0A0A6YXJ9 117 aa9.99□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Gm28044L7N1X0 119 aa9.99□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Sumo2P61957 95 aaKnown RBP9.99□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Sdhaf1Q3U276 118 aa9.99□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Ighv2-7A0A075B5Q8 116 aa9.99□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Gm42674D3YUT9 64 aa9.99□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Olfr311Q5NC59 308 aa9.99□□□□□ -0.81
Rnf4-204ENSMUST00000182047 A930009A15RikG3UYI6 118 aa9.98□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Cox7cP17665 63 aa9.98□□□□□ -0.81
Rnf4-204ENSMUST00000182047 TctaQ8VEA7 122 aa9.98□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Pradc1Q9D9N8 188 aa9.98□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Pgpep1Q9ESW8 209 aa9.98□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Sigmar1O55242 223 aa9.98□□□□□ -0.81
Rnf4-204ENSMUST00000182047 HampQ9EQ21 83 aa9.98□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Trav9-2A0A075B647 113 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Trav9-4A0A0B4J1K2 113 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 P01802 115 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Srsf2Q62093 221 aaKnown RBP9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Tal2Q62282 108 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Avpi1Q9D7H4 142 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Igfn1Q3KNY0 2849 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Ighv12-3A0A075B5T1 117 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Gm8439G3UWA7 96 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Ndufa4Q62425 82 aaKnown RBP9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 RhohQ9D3G9 191 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Dynlrb2Q9DAJ5 96 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Plac1Q9JI83 173 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Tenm4Q3UHK6 2771 aa9.97□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Ighv1-50A0A075B5W1 117 aa9.96□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Foxi1Q922I5 372 aa9.96□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Ucn2Q99ML8 113 aa9.96□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Smim1P0C8K7 78 aa9.96□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Cd69P37217 199 aa9.96□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Rpl39P62892 51 aa9.96□□□□□ -0.81
Rnf4-204ENSMUST00000182047 LbhQ9CX60 105 aa9.96□□□□□ -0.81
Rnf4-204ENSMUST00000182047 Krtap26-1Q9D7N2 215 aa9.96□□□□□ -0.81
Rnf4-204ENSMUST00000182047 LhbO09108 141 aa9.96□□□□□ -0.82
Rnf4-204ENSMUST00000182047 Nit2Q9JHW2 276 aa9.96□□□□□ -0.82
Rnf4-204ENSMUST00000182047 NipblQ6KCD5 2798 aaKnown RBP9.95□□□□□ -0.82
Rnf4-204ENSMUST00000182047 Gm45785A0A1B0GT05 94 aa9.95□□□□□ -0.82
Rnf4-204ENSMUST00000182047 Tcrg-C3L7N479 172 aa9.95□□□□□ -0.82
Rnf4-204ENSMUST00000182047 Rnase1P00683 149 aa9.95□□□□□ -0.82
Rnf4-204ENSMUST00000182047 P03985 172 aa9.95□□□□□ -0.82
Rnf4-204ENSMUST00000182047 Gm26661M0QWV4 156 aa9.95□□□□□ -0.82
Rnf4-204ENSMUST00000182047 Psmb11Q8BG41 302 aa9.95□□□□□ -0.82
Rnf4-204ENSMUST00000182047 Klk7Q91VE3 249 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 166.3 ms