RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Ighv3-8A0A075B5T0 131 aa9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Higd1cQ76I25 96 aa9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 9930022D16RikQ8BG27 128 aa9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Mlst8Q9DCJ1 326 aa9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Wt1P22561 449 aa9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Ntn5Q3UQ22 452 aa9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Crip2Q9DCT8 208 aaKnown RBP9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Fstl3Q9EQC7 256 aa9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Eml6Q5SQM0 1958 aa9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 BptfA2A654 3036 aaKnown RBP9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Gm26661M0QWV4 156 aa9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Ube2d1P61080 147 aaKnown RBP9.3□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Ang3P97802 145 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 ScxQ64124 207 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Wdr86D3Z757 380 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Q9CQ90 155 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Bub3Q9WVA3 326 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Ighv8-11A0A075B5X4 119 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 P06330 118 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Ly6c1P0CW02 131 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Tmem254aP0DN89 123 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Tmem254bP0DN90 123 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Tmem254cP0DN91 123 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 C1qcQ02105 246 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Spata25Q9DA57 226 aa9.29□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Lypd1Q8BLC3 141 aa9.28□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Trav6-4A0A075B6B4 115 aa9.28□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Ighv1-20A0A0A6YX66 117 aa9.28□□□□□ -0.92
Bdnf-205ENSMUST00000111045 1520401A03RikA0A0J9YVH6 598 aa9.28□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Glrp1E9Q9S8 174 aa9.28□□□□□ -0.92
Bdnf-205ENSMUST00000111045 NpwA0A1L1STR8 176 aa9.28□□□□□ -0.92
Bdnf-205ENSMUST00000111045 P01812 117 aa9.28□□□□□ -0.92
Bdnf-205ENSMUST00000111045 AngP21570 145 aa9.28□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Rnf7Q9WTZ1 113 aa9.28□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Gm16381A0A1Y7VKT9 73 aa9.27□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Cysrt1Q9D1E4 142 aa9.27□□□□□ -0.92
Bdnf-205ENSMUST00000111045 Trav4-3A0A0B4J1K1 110 aa9.27□□□□□ -0.93
Bdnf-205ENSMUST00000111045 E130218I03RikA0A0U1RNU5 63 aa9.27□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Defb12Q8K4N3 78 aa9.27□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Pfn2Q9JJV2 140 aa9.27□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Serp1Q9Z1W5 66 aa9.27□□□□□ -0.93
Bdnf-205ENSMUST00000111045 AcanQ61282 2132 aaKnown RBP9.27□□□□□ -0.93
Bdnf-205ENSMUST00000111045 IgipA0A1B0GR74 53 aa9.26□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Dph3Q8K0W9 82 aa9.26□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Tcf20Q9EPQ8 1987 aa9.26□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Igkv14-130A0A0G2JF45 117 aa9.25□□□□□ -0.93
Bdnf-205ENSMUST00000111045 IappP12968 93 aa9.25□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Snrpd3P62320 126 aaKnown RBP9.25□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Nbl1Q61477 178 aa9.25□□□□□ -0.93
Bdnf-205ENSMUST00000111045 SelenowP63300 88 aa9.25□□□□□ -0.93
Bdnf-205ENSMUST00000111045 SbsponQ3UPR9 264 aa9.25□□□□□ -0.93
Bdnf-205ENSMUST00000111045 4933414I15RikQ9D4D5 133 aa9.25□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Gm4861Q8C5A4 106 aa9.25□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Gm2564F6Z9S8 108 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Rnase2aQ8K196 155 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Wipf1Q8K1I7 493 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Flg2Q2VIS4 2362 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Tln1P26039 2541 aaKnown RBP9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Psmb11Q8BG41 302 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Lrp4Q8VI56 1905 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 H2al1bA0A087WP11 105 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 H2al1kJ3QP08 105 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 P04940 107 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 P04942 107 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 TeppQ6IMH0 216 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 H2al1eQ810S6 105 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Tmem30bQ8BHG3 353 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Pip4p2Q9CZX7 257 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 H2al1mQ9DAD9 105 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Pcsk5Q04592 1877 aa9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Prrc2aQ7TSC1 2158 aaKnown RBP9.24□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Trbv13-1A0A0B4J1P8 112 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Igkv19-93A0A0G2JFZ3 115 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Mrpl35Q9CQL6 188 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Gm33815A0A087WNV3 176 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Igkv14-100A0A0G2JG36 117 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Igkv13-84A0A140T8N3 115 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Gm5093E9PZB3 174 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Gm17732E9Q5I2 61 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Tmem167aQ9CR64 72 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Muc5acE9QAQ8 3455 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Zcchc24B2RVL6 241 aaKnown RBP9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 P04944 107 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Rpl39P62892 51 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Crip1P63254 77 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 4930535I16RikQ9CUI2 172 aa9.23□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Igkv14-111A0A140T8P9 117 aa9.22□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Q9D8Q6 235 aa9.22□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Fam208bQ5DTT3 2382 aa9.22□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Cfap126Q6P8X9 189 aa9.22□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Ep300B2RWS6 2412 aa9.22□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Gm29666A0A087WQ99 126 aa9.22□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Fhl2O70433 279 aa9.22□□□□□ -0.93
Bdnf-205ENSMUST00000111045 SrarpQ3ULG3 163 aa9.22□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Mpv17l2Q8VIK2 200 aa9.22□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Tcte2E9PY37 120 aa9.21□□□□□ -0.93
Bdnf-205ENSMUST00000111045 AmelxP63277 210 aa9.21□□□□□ -0.93
Bdnf-205ENSMUST00000111045 Spata46Q4FZF2 204 aa9.21□□□□□ -0.93
Bdnf-205ENSMUST00000111045 PtprbB2RU80 1998 aa9.21□□□□□ -0.93
Bdnf-205ENSMUST00000111045 LeprotO89013 131 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms