RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Gm10638F6QEG2 257 aa8.15□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Fxyd7P59648 80 aa8.15□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Spry4Q9WTP2 300 aa8.15□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Igkv4-69A0A0B4J1I6 116 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 P04944 107 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Tcl1b3P56842 122 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Trbv14A0A140T8L9 115 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 SonQ9QX47 2444 aaKnown RBP8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Col4a4Q9QZR9 1682 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Cd33Q63994 403 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Ndufb4Q9CQC7 129 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Igkv4-79A0A075B5L8 119 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Ighv1-12A0A0A6YXJ9 117 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 P01793 123 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Sorl1O88307 2215 aaKnown RBP8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 P01748 117 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Fhl3Q9R059 289 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Ndufc1Q9CQY9 76 aa8.14□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Nsun4C4P6S0 806 aaKnown RBP8.13□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Ighv8-4A0A0A6YW26 117 aa8.13□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Spink8Q09TK9 105 aa8.13□□□□□ -1.11
Scn8a-201ENSMUST00000082209 4933414I15RikQ9D4D5 133 aa8.13□□□□□ -1.11
Scn8a-201ENSMUST00000082209 CrygcQ61597 174 aa8.12□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Ighv8-8A0A0A6YXQ0 119 aa8.12□□□□□ -1.11
Scn8a-201ENSMUST00000082209 P01750 117 aa8.12□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Ighv12-3A0A075B5T1 117 aa8.12□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Igkv4-78A0A0A6YYE5 119 aa8.12□□□□□ -1.11
Scn8a-201ENSMUST00000082209 BikO70337 150 aa8.12□□□□□ -1.11
Scn8a-201ENSMUST00000082209 P01745 121 aa8.12□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Q80X32 188 aaKnown RBP8.11□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Nop10Q9CQS2 64 aa8.11□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Zmat4Q8BZ94 229 aa8.11□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Ighv1-53A0A075B5W3 117 aa8.11□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Klk11Q9QYN3 276 aa8.11□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Defb18Q30KP5 85 aa8.11□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Gm14137Q8CE97 175 aa8.11□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Tm2d2Q8R0I4 213 aa8.11□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Mrps12O35680 139 aa8.11□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Sslp1Q3UN54 99 aa8.11□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Gm21060J3KMU4 56 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Runx1Q03347 451 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Gm26602M0QWA4 95 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Igkv6-13A0A0G2JGY3 119 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 P01791 123 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Spink12Q9D256 87 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Rbm3O89086 153 aaKnown RBP8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Hoxb4P10284 250 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Spata25Q9DA57 226 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Igkv2-137A0A0B4J1H6 120 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Igll1P20764 209 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Hrct1Q9D6B9 109 aa8.1□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Ndufa4l2Q4FZG9 87 aa8.09□□□□□ -1.11
Scn8a-201ENSMUST00000082209 4930415O20RikQ8CDT5 131 aa8.09□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Trav11A0A0B4J1J9 114 aa8.09□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Gm15294V9GXA7 121 aa8.09□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Prok1Q14A28 105 aa8.09□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Prr3Q811B5 190 aaKnown RBP8.09□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Tm2d1Q99MB3 208 aa8.09□□□□□ -1.11
Scn8a-201ENSMUST00000082209 P01794 123 aa8.09□□□□□ -1.11
Scn8a-201ENSMUST00000082209 PpbpQ9EQI5 113 aa8.09□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Col27a1Q5QNQ9 1845 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Igkv4-58A0A0G2JGI6 119 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 GrnP28798 589 aaKnown RBP8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Tmem254aP0DN89 123 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Tmem254bP0DN90 123 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Tmem254cP0DN91 123 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Gm15127B1AVZ5 449 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Gm15091B1AZM2 449 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 P01729 129 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 9230109A22RikQ8BHE6 111 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Igkv4-57A0A0A6YYE7 117 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Igkv4-74A0A0B4J1I3 119 aa8.08□□□□□ -1.12
Scn8a-201ENSMUST00000082209 NpyP57774 97 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 P01674 108 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Rmi2Q3UPE3 149 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 TectaO08523 2155 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Ighv1-11A0A0A6YWI9 117 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Ighv1-61P01749 117 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 PrcdQ00LT2 53 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Smim20D3Z7Q2 69 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 B9d2Q3UK10 175 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Gphb5Q812B2 130 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Foxi2Q3I5G5 311 aa8.07□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Ighv6-7A0A0A6YWU3 119 aa8.06□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Ighv1-75A0A075B5Y2 117 aa8.06□□□□□ -1.12
Scn8a-201ENSMUST00000082209 SptssbQ925E8 76 aa8.06□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Igkv8-26A0A075B5N5 123 aa8.06□□□□□ -1.12
Scn8a-201ENSMUST00000082209 IgipA0A1B0GR74 53 aa8.06□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Ccdc179J3QM76 67 aa8.06□□□□□ -1.12
Scn8a-201ENSMUST00000082209 9130230L23RikQ8CC80 163 aa8.06□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Iglc1A0A0G2JE99 106 aa8.05□□□□□ -1.12
Scn8a-201ENSMUST00000082209 P01843 105 aa8.05□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Ube2bP63147 152 aa8.05□□□□□ -1.12
Scn8a-201ENSMUST00000082209 AW146154Q3TPQ7 468 aa8.05□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Hcfc1Q61191 2045 aaKnown RBP8.05□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Zfand3Q497H0 227 aa8.05□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Ormdl1Q921I0 153 aa8.05□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Ighv2-6-8A0A0A6YWY9 116 aa8.05□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Gm15128A2ADW8 449 aa8.05□□□□□ -1.12
Scn8a-201ENSMUST00000082209 Gm15093A2BI72 449 aa8.05□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms