RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Igkv4-81A0A0G2JEY5 119 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Gm7102J3QQ10 178 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 CrygbP04344 175 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 H2al1aQ5M8Q2 105 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Ormdl2Q9CQZ0 153 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 SNORCQ9CXL7 121 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Zzef1Q5SSH7 2924 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Ighv1-4A0A075B5T4 117 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Brd3osA0A1B0GRB6 84 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Igf1P05017 153 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Olfr312Q7TRZ9 308 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Tmem30bQ8BHG3 353 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Ube2wQ8VDW4 151 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Zc2hc1bQ9D534 172 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Bub3Q9WVA3 326 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Tmem243B2RVB9 118 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Gm5878E9PUB3 99 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Csn3P06796 181 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Cdkn1aP39689 159 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Olfr313Q5NC55 308 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Ndufa4Q62425 82 aaKnown RBP6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 9430069I07RikQ9CX21 111 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Plac1Q9JI83 173 aa6.29□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Ighv1-31A0A0A6YWK5 117 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 P01837 106 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 P18527 97 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Mrps21P58059 87 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Rps28P62858 69 aaKnown RBP6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 C1qcQ02105 246 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Prok1Q14A28 105 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Ighv1-53A0A075B5W3 117 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Gm10135F6TEE5 83 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Cfap126Q6P8X9 189 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Gm9922Q8C3P1 144 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Gm10295Q8CCF3 114 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Il1f10Q8R459 152 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Wisp2Q9Z0G4 251 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Igkv4-90A0A075B5L3 117 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Trav14d-3-dv8A0A075B619 120 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Spry2Q9QXV8 315 aa6.28□□□□□ -1.4
Cdc40-201ENSMUST00000044166 Fbn2Q61555 2907 aa6.27□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Sumo2P61957 95 aaKnown RBP6.27□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Esm1Q9QYY7 184 aa6.27□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Defb45Q3V490 66 aa6.27□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Minos1Q7TNS2 76 aa6.27□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gm17334Q8C6U3 126 aa6.27□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gm4763Q8CFJ5 196 aa6.27□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Tmem14cQ9CQN6 114 aa6.27□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Lama5Q61001 3718 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Dopey2Q3UHQ6 2295 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gm10036E9PYL9 178 aaKnown RBP6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 A130051J06RikQ8CAU1 227 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gkn1Q9CR36 201 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Ighv3-4A0A0A6YXF1 117 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Igkv4-59A0A0B4J1I8 117 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gm10271F6WY25 52 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 PspnO70300 156 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Ighv1-61P01749 117 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 P01812 117 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 S100a4P07091 101 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gm6040Q4QY32 63 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gm16223Q8CBM3 117 aa6.26□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Sptbn1Q62261 2363 aaKnown RBP6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Igkv4-71A0A0G2JEH0 117 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 SbsponQ3UPR9 264 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Psmb11Q8BG41 302 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Q9CX25 107 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Sptan1P16546 2472 aaKnown RBP6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Ighv8-5A0A0A6YY60 119 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Defa28D3Z1V9 94 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Ube2d1P61080 147 aaKnown RBP6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Sdhaf1Q3U276 118 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gemin7Q9CWY4 129 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gm29423A0A087WRM1 55 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Defa27F2Z403 93 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 1700056E22RikF7CNM6 234 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gm17455G3UW87 128 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Lynx1P0DP60 116 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Spink6Q8BT20 105 aa6.25□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Ighv3-1A0A075B5S6 116 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Trav6-4A0A075B6B4 115 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Igkv4-57A0A0A6YYE7 117 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Rpl36-ps4A0A140T8U4 117 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 4930447F04RikA2AFR2 126 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 TeppQ6IMH0 216 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Ly6lH3BJG9 140 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 TshbP12656 138 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Tac4Q99N14 128 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Mrpl36Q99N90 102 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 SnurfQ9WU12 71 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Cep250Q60952 2414 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Trav4n-4A0A075B615 110 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Ighv1-52A0A0A6YXC3 117 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gm21994F6T2D2 329 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Ube2d3P61079 147 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Ube2d2P62838 147 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Atp6v0e1Q9CQD8 81 aa6.24□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Gm17727E9Q4V7 109 aa6.23□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Zfand3Q497H0 227 aa6.23□□□□□ -1.41
Cdc40-201ENSMUST00000044166 Fam24aQ8CF27 98 aa6.23□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms