RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Mlst8Q9DCJ1 326 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Fstl3Q9EQC7 256 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ccl8Q9Z121 97 aa7.2□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Gm20219A0A1B0GRQ3 87 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Socs3O35718 225 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ube2d3P61079 147 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ube2d2P62838 147 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 ScxQ64124 207 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Gm19410A0A140LJC7 2098 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 DscamQ9ERC8 2013 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Trbv13-1A0A0B4J1P8 112 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 A0A1L1SR50 188 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Rpl18aP62717 176 aaKnown RBP7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Timm21Q8CCM6 249 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Tet2Q4JK59 1912 aaKnown RBP7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ighv13-2A0A0A6YWN3 119 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ighv1-61P01749 117 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 P06330 118 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 IappP12968 93 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Wt1P22561 449 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 NrgnP60761 78 aa7.19□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ighv5-9-1A0A0A6YVS4 126 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ighv1-20A0A0A6YX66 117 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Fam24aQ8CF27 98 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Prrc2aQ7TSC1 2158 aaKnown RBP7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Dmxl2Q8BPN8 3032 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Trav6-4A0A075B6B4 115 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Col8a2P25318 699 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ntn5Q3UQ22 452 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ndufa4Q62425 82 aaKnown RBP7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Higd1cQ76I25 96 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Defb12Q8K4N3 78 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 NbeaQ9EPN1 2936 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Akap13E9Q394 2776 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 IgipA0A1B0GR74 53 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 CntfrO88507 372 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 4930535I16RikQ9CUI2 172 aa7.18□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Gm9513B3GLJ6 99 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Crip1P63254 77 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ang3P97802 145 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 PtprbB2RU80 1998 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Sh2d1bO35324 132 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Vpreb2P13373 142 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Dkk4Q8VEJ3 221 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Cysrt1Q9D1E4 142 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Rps28P62858 69 aaKnown RBP7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Mob4Q6PEB6 225 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 4933414I15RikQ9D4D5 133 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Zzef1Q5SSH7 2924 aa7.17□□□□□ -1.26
Ctc1-201ENSMUST00000021278 CrygeQ03740 174 aa7.16□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ube2d1P61080 147 aaKnown RBP7.16□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Rpl39P62892 51 aa7.16□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Glrp1E9Q9S8 174 aa7.16□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Gm10384Q3UQ87 92 aa7.16□□□□□ -1.26
Ctc1-201ENSMUST00000021278 A830031A19RikQ8BNT5 113 aa7.16□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Rnase2aQ8K196 155 aa7.16□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Rnf7Q9WTZ1 113 aa7.16□□□□□ -1.26
Ctc1-201ENSMUST00000021278 DspE9Q557 2883 aaKnown RBP7.15□□□□□ -1.26
Ctc1-201ENSMUST00000021278 SrarpQ3ULG3 163 aa7.15□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Cspg4Q8VHY0 2327 aa7.15□□□□□ -1.26
Ctc1-201ENSMUST00000021278 1520401A03RikA0A0J9YVH6 598 aa7.15□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Gm2564F6Z9S8 108 aa7.15□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Ss18Q62280 418 aa7.15□□□□□ -1.26
Ctc1-201ENSMUST00000021278 CdsnQ7TPC1 561 aa7.15□□□□□ -1.26
Ctc1-201ENSMUST00000021278 Igkv14-130A0A0G2JF45 117 aa7.15□□□□□ -1.27
Ctc1-201ENSMUST00000021278 C1qcQ02105 246 aa7.15□□□□□ -1.27
Ctc1-201ENSMUST00000021278 H1fxQ80ZM5 188 aa7.15□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Ubl5Q9EPV8 73 aa7.15□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Epg5Q80TA9 2572 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 AngP21570 145 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Lyrm9Q3UN90 78 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 H2al1aQ5M8Q2 105 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gm9936Q8C864 160 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 NpwA0A1L1STR8 176 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Ccl19O70460 108 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 SelenowP63300 88 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Pfn2Q9JJV2 140 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Hoxb4P10284 250 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 9930022D16RikQ8BG27 128 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Tmem167aQ9CR64 72 aa7.14□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gm5093E9PZB3 174 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 P04940 107 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 P04942 107 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 P04944 107 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Mrpl35Q9CQL6 188 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 E130218I03RikA0A0U1RNU5 63 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 A630023A22RikJ3QP60 199 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Igkv1-35A0A0G2JDE5 120 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Igkv19-93A0A0G2JFZ3 115 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 AmelxP63277 210 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 SbsponQ3UPR9 264 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Q9CQ90 155 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Abca12E9Q876 2595 aa7.13□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Folr2Q05685 251 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Lypd1Q8BLC3 141 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Dph3Q8K0W9 82 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Pip4p2Q9CZX7 257 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Igkv6-32A0A140T8N9 115 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Psmb11Q8BG41 302 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Q9D8Q6 235 aa7.12□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms