RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Ucn2Q99ML8 113 aa9.94□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Sorl1O88307 2215 aaKnown RBP9.94□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Unc79Q0KK59 2596 aa9.94□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Trbv17A0A140T8P8 114 aa9.93□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Sertad4A7DTG3 377 aa9.93□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Olfr322Q5NCC8 327 aa9.93□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Dkk2Q9QYZ8 259 aa9.93□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Tcl1b4P56844 120 aa9.93□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 1500011B03RikQ3TTH7 73 aa9.93□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Trappc1Q5NCF2 145 aa9.93□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Gphb5Q812B2 130 aa9.93□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Igkv4-74A0A0B4J1I3 119 aa9.92□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Rpl36-ps4A0A140T8U4 117 aa9.92□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 P01747 120 aa9.92□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Thy1P01831 162 aa9.92□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Tspo2Q9CRZ8 162 aa9.92□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Wfdc2Q9DAU7 174 aa9.92□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Ovol2Q8CIV7 274 aa9.91□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Ceacam15A0A0B4J1L0 234 aa9.9□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Mrps12O35680 139 aa9.9□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Ly6g5bQ8K1T4 194 aa9.9□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Bahcc1Q3UHR0 2643 aa9.9□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Ank2Q8C8R3 3898 aa9.9□□□□□ -0.82
Pdlim5-208ENSMUST00000196220 Trav9-2A0A075B647 113 aa9.9□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Ighv8-8A0A0A6YXQ0 119 aa9.9□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Trav9-4A0A0B4J1K2 113 aa9.9□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Trbv30A0A0B4J1P1 111 aa9.9□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 1810032O08RikE9PZV8 113 aa9.9□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Rnase1P00683 149 aa9.9□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Olfr313Q5NC55 308 aa9.9□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Tctex1d2Q9CQ66 144 aa9.9□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gm765B2RVL9 189 aa9.89□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gm17732E9Q5I2 61 aa9.89□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Nat8f4G5E8L3 226 aa9.89□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Zcwpw2Q08EN7 125 aa9.89□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Rnf152Q8BG47 203 aa9.89□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Tax1bp3Q9DBG9 124 aa9.89□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 PpbpQ9EQI5 113 aa9.89□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Defa35E9QLQ1 93 aa9.88□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gcn1E9PVA8 2671 aaKnown RBP9.88□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 BC067074F6RXI4 2391 aa9.88□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Krtap27-1E9PX37 202 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gm10271F6WY25 52 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 CrxO54751 299 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Pglyrp1O88593 182 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gm7489Q3UT34 171 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 AamdcQ8R0P4 122 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Prss29Q99MS4 279 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Q9DAA3 117 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 EsdQ9R0P3 282 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Arhgap32Q811P8 2089 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Polr2kQ63871 58 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 CtrlQ9ER05 264 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Rs1Q9Z1L4 224 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Celsr2Q9R0M0 2920 aa9.87□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gm16442D3YZG3 307 aa9.86□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Klk1b4P00757 256 aa9.86□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Srp14P16254 110 aaKnown RBP9.86□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gm10604Q3V0X7 143 aa9.86□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 AI854703Q8BIN3 203 aa9.86□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gm16223Q8CBM3 117 aa9.86□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Sec11aQ9R0P6 179 aa9.86□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Mast4Q811L6 2618 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Reg3gO09049 174 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gm5629P06327 117 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 GalmQ8K157 342 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Cotl1Q9CQI6 142 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 PmvkQ9D1G2 192 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Synj2bpQ9D6K5 145 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Clec5aQ9R007 190 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gm17359A0A0G2JEB7 487 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 AponG3X9D6 251 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 SstP60041 116 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 C1qcQ02105 246 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Pmis2Q497Q9 96 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Rnf114Q9ET26 229 aa9.85□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Nav3Q80TN7 2359 aa9.84□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Gm3443F7CCV5 94 aa9.84□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Erdr1J3QMM0 206 aa9.84□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Csn3P06796 181 aa9.84□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Ca1P13634 261 aa9.84□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Slc25a20Q9Z2Z6 301 aaKnown RBP9.84□□□□□ -0.83
Pdlim5-208ENSMUST00000196220 Ighv1-85A0A075B5Y6 117 aa9.83□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Emp2O88662 172 aa9.83□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 P01753 117 aa9.83□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 P06329 120 aa9.83□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Gpx1P11352 201 aa9.83□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Lyzl4Q9D925 145 aa9.83□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Gm45521A0A1B0GRK0 198 aa9.82□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Hnrnpa3Q8BG05 379 aaKnown RBP9.82□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Ifi27l2aQ8R412 90 aa9.82□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Igkv4-68A0A0B4J1I7 117 aa9.82□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Cox17P56394 63 aa9.82□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Hbb-bsA8DUK4 147 aa9.81□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Hbb-b1P02088 147 aa9.81□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Egr2P08152 470 aa9.81□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 BC025920Q3US60 128 aa9.81□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Clec4b2Q67DU8 208 aa9.81□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 TrrapQ80YV3 2565 aaKnown RBP9.8□□□□□ -0.84
Pdlim5-208ENSMUST00000196220 Gm2564F6Z9S8 108 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms