RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Igkv4-61A0A0G2JH00 117 aa13.1□□□□□ -0.31
Cux1-206ENSMUST00000176172 Znf740Q6NZQ6 180 aa13.1□□□□□ -0.31
Cux1-206ENSMUST00000176172 NpbQ8K4P1 119 aa13.1□□□□□ -0.31
Cux1-206ENSMUST00000176172 Tm2d1Q99MB3 208 aa13.1□□□□□ -0.31
Cux1-206ENSMUST00000176172 Bub3Q9WVA3 326 aa13.1□□□□□ -0.31
Cux1-206ENSMUST00000176172 Gm10553J3QPF1 123 aa13.1□□□□□ -0.31
Cux1-206ENSMUST00000176172 P04944 107 aa13.1□□□□□ -0.31
Cux1-206ENSMUST00000176172 Olfr311Q5NC59 308 aa13.1□□□□□ -0.31
Cux1-206ENSMUST00000176172 Nbl1Q61477 178 aa13.1□□□□□ -0.31
Cux1-206ENSMUST00000176172 Defb18Q30KP5 85 aa13.09□□□□□ -0.31
Cux1-206ENSMUST00000176172 A530064D06RikQ8BNV8 229 aa13.09□□□□□ -0.31
Cux1-206ENSMUST00000176172 Map6d1Q14BB9 191 aa13.09□□□□□ -0.31
Cux1-206ENSMUST00000176172 Gatd1Q8BFQ8 220 aa13.09□□□□□ -0.31
Cux1-206ENSMUST00000176172 Igkv2-137A0A0B4J1H6 120 aa13.09□□□□□ -0.31
Cux1-206ENSMUST00000176172 BlcapP62951 87 aa13.08□□□□□ -0.31
Cux1-206ENSMUST00000176172 MgamB5THE2 1827 aa13.08□□□□□ -0.32
Cux1-206ENSMUST00000176172 Igkv4-53A0A0G2JFC6 119 aa13.08□□□□□ -0.32
Cux1-206ENSMUST00000176172 Cd33Q63994 403 aa13.08□□□□□ -0.32
Cux1-206ENSMUST00000176172 Mpv17l2Q8VIK2 200 aa13.08□□□□□ -0.32
Cux1-206ENSMUST00000176172 OtoglF7A4A7 2325 aa13.08□□□□□ -0.32
Cux1-206ENSMUST00000176172 Nav2E9Q842 2432 aa13.08□□□□□ -0.32
Cux1-206ENSMUST00000176172 9230109A22RikQ8BHE6 111 aa13.08□□□□□ -0.32
Cux1-206ENSMUST00000176172 Trav14d-3-dv8A0A075B619 120 aa13.08□□□□□ -0.32
Cux1-206ENSMUST00000176172 Trav6-6A0A075B603 114 aa13.07□□□□□ -0.32
Cux1-206ENSMUST00000176172 Ccl25O35903 144 aa13.07□□□□□ -0.32
Cux1-206ENSMUST00000176172 Pla2g2aP31482 146 aa13.07□□□□□ -0.32
Cux1-206ENSMUST00000176172 Ighv3-1A0A075B5S6 116 aa13.07□□□□□ -0.32
Cux1-206ENSMUST00000176172 Ighv6-7A0A0A6YWU3 119 aa13.07□□□□□ -0.32
Cux1-206ENSMUST00000176172 Tcf20Q9EPQ8 1987 aa13.06□□□□□ -0.32
Cux1-206ENSMUST00000176172 9130230L23RikQ8CC80 163 aa13.06□□□□□ -0.32
Cux1-206ENSMUST00000176172 P01753 117 aa13.06□□□□□ -0.32
Cux1-206ENSMUST00000176172 Nop10Q9CQS2 64 aa13.06□□□□□ -0.32
Cux1-206ENSMUST00000176172 Sorl1O88307 2215 aaKnown RBP13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Gm15128A2ADW8 449 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Gm15093A2BI72 449 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Luzp4B1AV09 449 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Gm15107B1B0X0 449 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Gm15097E9QA14 449 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Gm15085Q62012 449 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Ubl5Q9EPV8 73 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Trav9-2A0A075B647 113 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Trav9-4A0A0B4J1K2 113 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 P01756 117 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 P01757 117 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Fam241bQ9D882 120 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Hivep3A2A884 2348 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Gm15127B1AVZ5 449 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Gata3P23772 443 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Prop1P97458 223 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Dand5Q76LW6 185 aa13.05□□□□□ -0.32
Cux1-206ENSMUST00000176172 Trav9d-4A0A0G2JG37 103 aa13.04□□□□□ -0.32
Cux1-206ENSMUST00000176172 Pcp4P63054 62 aa13.04□□□□□ -0.32
Cux1-206ENSMUST00000176172 Igkv4-72A0A0B4J1I4 117 aa13.04□□□□□ -0.32
Cux1-206ENSMUST00000176172 Ndufa3Q9CQ91 84 aa13.04□□□□□ -0.32
Cux1-206ENSMUST00000176172 Parp4E9PYK3 1969 aa13.04□□□□□ -0.32
Cux1-206ENSMUST00000176172 Odf1Q61999 247 aa13.03□□□□□ -0.32
Cux1-206ENSMUST00000176172 PpbpQ9EQI5 113 aa13.03□□□□□ -0.32
Cux1-206ENSMUST00000176172 Ndufa12Q7TMF3 145 aaKnown RBP13.03□□□□□ -0.32
Cux1-206ENSMUST00000176172 IgipA0A1B0GR74 53 aa13.02□□□□□ -0.32
Cux1-206ENSMUST00000176172 Igkv4-54A0A0G2JES9 117 aa13.02□□□□□ -0.32
Cux1-206ENSMUST00000176172 Gm15557A6PWY0 234 aa13.02□□□□□ -0.32
Cux1-206ENSMUST00000176172 Hoxb4P10284 250 aa13.02□□□□□ -0.32
Cux1-206ENSMUST00000176172 Col4a6B1AVK5 1691 aa13.02□□□□□ -0.33
Cux1-206ENSMUST00000176172 Chd8Q09XV5 2582 aaKnown RBP13.02□□□□□ -0.33
Cux1-206ENSMUST00000176172 Q99M08 65 aa13.02□□□□□ -0.33
Cux1-206ENSMUST00000176172 Trav9n-2A0A0G2JDP3 113 aa13.02□□□□□ -0.33
Cux1-206ENSMUST00000176172 1500011B03RikQ3TTH7 73 aa13.01□□□□□ -0.33
Cux1-206ENSMUST00000176172 Spata25Q9DA57 226 aa13.01□□□□□ -0.33
Cux1-206ENSMUST00000176172 Znrf2Q71FD5 238 aa13.01□□□□□ -0.33
Cux1-206ENSMUST00000176172 Spink12Q9D256 87 aa13.01□□□□□ -0.33
Cux1-206ENSMUST00000176172 Ndufa1O35683 70 aa13.01□□□□□ -0.33
Cux1-206ENSMUST00000176172 Zmat4Q8BZ94 229 aa13.01□□□□□ -0.33
Cux1-206ENSMUST00000176172 Trav9d-3A0A075B695 113 aa13.01□□□□□ -0.33
Cux1-206ENSMUST00000176172 Fhl1P97447 280 aaKnown RBP13.01□□□□□ -0.33
Cux1-206ENSMUST00000176172 Gm15294V9GXA7 121 aa13.01□□□□□ -0.33
Cux1-206ENSMUST00000176172 Notch2O35516 2470 aa13□□□□□ -0.33
Cux1-206ENSMUST00000176172 Crip1P63254 77 aa13□□□□□ -0.33
Cux1-206ENSMUST00000176172 Igkv4-79A0A075B5L8 119 aa13□□□□□ -0.33
Cux1-206ENSMUST00000176172 NpsP0C0P8 89 aa13□□□□□ -0.33
Cux1-206ENSMUST00000176172 Ndufb4Q9CQC7 129 aa13□□□□□ -0.33
Cux1-206ENSMUST00000176172 Trav3-4A0A075B654 114 aa12.99□□□□□ -0.33
Cux1-206ENSMUST00000176172 Obox8V9GWY9 217 aa12.99□□□□□ -0.33
Cux1-206ENSMUST00000176172 BC048562Q80ZQ7 204 aa12.99□□□□□ -0.33
Cux1-206ENSMUST00000176172 4930415O20RikQ8CDT5 131 aa12.99□□□□□ -0.33
Cux1-206ENSMUST00000176172 Pcnx2Q5DU28 2122 aa12.99□□□□□ -0.33
Cux1-206ENSMUST00000176172 7420426K07RikQ3UX66 186 aa12.99□□□□□ -0.33
Cux1-206ENSMUST00000176172 Fam240bJ3QMB3 78 aa12.99□□□□□ -0.33
Cux1-206ENSMUST00000176172 Klk11Q9QYN3 276 aa12.99□□□□□ -0.33
Cux1-206ENSMUST00000176172 Cd99Q8VCN6 175 aa12.98□□□□□ -0.33
Cux1-206ENSMUST00000176172 Rpl32P62911 135 aaKnown RBP12.98□□□□□ -0.33
Cux1-206ENSMUST00000176172 Ttc28Q80XJ3 2450 aa12.98□□□□□ -0.33
Cux1-206ENSMUST00000176172 Pglyrp1O88593 182 aa12.97□□□□□ -0.33
Cux1-206ENSMUST00000176172 Tet1Q3URK3 2007 aaKnown RBP12.97□□□□□ -0.33
Cux1-206ENSMUST00000176172 Prr12E9PYL2 2035 aaKnown RBP12.97□□□□□ -0.33
Cux1-206ENSMUST00000176172 Zfand3Q497H0 227 aa12.97□□□□□ -0.33
Cux1-206ENSMUST00000176172 Gm9949Q8C9F4 104 aa12.97□□□□□ -0.33
Cux1-206ENSMUST00000176172 Ang4Q3TMQ6 144 aa12.97□□□□□ -0.33
Cux1-206ENSMUST00000176172 Gm20481G3UXK4 153 aa12.97□□□□□ -0.33
Cux1-206ENSMUST00000176172 Igkv4-69A0A0B4J1I6 116 aa12.96□□□□□ -0.33
Cux1-206ENSMUST00000176172 Zc2hc1bQ9D534 172 aa12.96□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 68.5 ms