RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 LoxP28301 411 aa6.9□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Immp1lQ9CQU8 166 aa6.9□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Lama1P19137 3084 aa6.9□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm12845A0A0N4SUM5 588 aa6.9□□□□□ -1.3
Col28a1-201ENSMUST00000115537 P01739 132 aa6.9□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Gm9961Q8BNV2 113 aa6.9□□□□□ -1.3
Col28a1-201ENSMUST00000115537 Frem2Q6NVD0 3160 aa6.9□□□□□ -1.31
Col28a1-201ENSMUST00000115537 P01756 117 aa6.9□□□□□ -1.31
Col28a1-201ENSMUST00000115537 P01757 117 aa6.9□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Cela2aP05208 271 aa6.9□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Tmem95P0DJF3 176 aa6.9□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Hoxb4P10284 250 aa6.9□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Trbv31A0A075B5J5 111 aa6.9□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm37988J3QM41 62 aa6.9□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Trav19A0A0B4J1K4 119 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 BB014433Q8C5R5 389 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Morn3Q8C5T4 241 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Cdip1Q9DB75 208 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Col27a1Q5QNQ9 1845 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm10767Q3TQP0 103 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm6899Q3USS0 134 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Spink13Q3UTS8 97 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm904Q3V2L5 102 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm6040Q4QY32 63 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Dmrt3Q80WT2 476 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Q9D131 166 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Dynlrb2Q9DAJ5 96 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Ash1lQ99MY8 2958 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Ighv1-7A0A075B5T7 117 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 P04940 107 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 P04941 107 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Myod1P10085 318 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Tmem213Q08EA8 116 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Klk5Q9D140 293 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Muc2Q80Z19 2680 aa6.89□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Itpr3P70227 2670 aa6.88□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Olfr312Q7TRZ9 308 aa6.88□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Tpsg1Q9QUL7 311 aa6.88□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Rpl36-ps4A0A140T8U4 117 aa6.88□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm20481G3UXK4 153 aa6.88□□□□□ -1.31
Col28a1-201ENSMUST00000115537 P01724 129 aa6.88□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Ighv1-58A0A075B5W9 117 aa6.88□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm44965A0A0N4SVR3 59 aa6.88□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Cysrt1Q9D1E4 142 aa6.88□□□□□ -1.31
Col28a1-201ENSMUST00000115537 P04942 107 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Smrp1Q2MH31 260 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 A230072I06RikQ3UUJ8 172 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm4763Q8CFJ5 196 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Ube2wQ8VDW4 151 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 GlrxQ9QUH0 107 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm33815A0A087WNV3 176 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm29423A0A087WRM1 55 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm7849D3YX03 116 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 CntfrO88507 372 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Mapk1ip1lQ8BH93 242 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Il19Q8CJ70 176 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Rasl10aQ8K5A4 203 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm28038F7BCN9 126 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Prop1P97458 223 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Prr13Q9CQJ5 137 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Tmem89Q9DA04 169 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm17324Q8C6J8 137 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Eml6Q5SQM0 1958 aa6.87□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Ly86O88188 162 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Tmem101Q91VP7 257 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Rnf5O35445 180 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 P01811 117 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Pde6hP61249 83 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Rbmy1bQ60990 380 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Zfp248Q640N4 576 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Olfr553Q7TRS6 326 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm17660B9UIU9 90 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm10251J3QPM5 127 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Rpl32-psP17932 135 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gm5105Q8C6Y9 112 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Mrpl55Q9CZ83 127 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Mettl26Q9DCS2 204 aa6.86□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Defb30Q30KN4 75 aa6.85□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Foxc1Q61572 553 aa6.85□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Lgals4Q8K419 326 aa6.85□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Q9DAQ5 155 aa6.85□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Arpc1aQ9R0Q6 370 aa6.85□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Atp5eP56382 52 aa6.85□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Q08AU9 97 aa6.85□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Col4a2P08122 1707 aa6.85□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Shisal2aA2A9G7 189 aa6.85□□□□□ -1.31
Col28a1-201ENSMUST00000115537 DspE9Q557 2883 aaKnown RBP6.85□□□□□ -1.31
Col28a1-201ENSMUST00000115537 P01837 106 aa6.84□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Ccl6P27784 116 aa6.84□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Cox6b1P56391 86 aaKnown RBP6.84□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Gkn1Q9CR36 201 aa6.84□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Defa28D3Z1V9 94 aa6.84□□□□□ -1.31
Col28a1-201ENSMUST00000115537 P01630 113 aa6.84□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Defb47Q30KN1 79 aa6.84□□□□□ -1.31
Col28a1-201ENSMUST00000115537 P06330 118 aa6.84□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Smim1P0C8K7 78 aa6.84□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Mrpl16Q99N93 251 aa6.84□□□□□ -1.31
Col28a1-201ENSMUST00000115537 Trav4n-4A0A075B615 110 aa6.84□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Gm42674D3YUT9 64 aa6.84□□□□□ -1.32
Col28a1-201ENSMUST00000115537 Sumo2P61957 95 aaKnown RBP6.84□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms