RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 P84750 121 aa13.25□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Igkv1-117A0A140T8M0 119 aa13.25□□□□□ -0.29
Ubr3-202ENSMUST00000112251 P01667 111 aa13.25□□□□□ -0.29
Ubr3-202ENSMUST00000112251 RtbdnQ8QZY4 247 aa13.25□□□□□ -0.29
Ubr3-202ENSMUST00000112251 OtosQ8R448 89 aa13.25□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Dcaf12l1Q8CBW4 501 aa13.24□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Igkv9-124A0A0G2JDR3 117 aa13.24□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Igkv3-7A0A0G2JE31 119 aa13.24□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Gm10912Q3UXH0 145 aa13.24□□□□□ -0.29
Ubr3-202ENSMUST00000112251 SisF8VQM5 1818 aa13.24□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Gm44973A0A140LJJ1 189 aa13.23□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Igkv1-35A0A0G2JDE5 120 aa13.23□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Cd24P24807 76 aa13.23□□□□□ -0.29
Ubr3-202ENSMUST00000112251 P01725 110 aa13.23□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Srsf2Q62093 221 aaKnown RBP13.23□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Klf11Q8K1S5 502 aa13.23□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Gm21976J3QNN2 249 aa13.23□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Glrp1E9Q9S8 174 aa13.23□□□□□ -0.29
Ubr3-202ENSMUST00000112251 P01792 123 aa13.22□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Foxi2Q3I5G5 311 aa13.22□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Ccl25O35903 144 aa13.22□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Mrps21P58059 87 aa13.22□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Tcl1b3P56842 122 aa13.22□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Gphb5Q812B2 130 aa13.22□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Ltbp1Q8CG19 1712 aa13.22□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Lyrm9Q3UN90 78 aa13.22□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Klk9Q32M27 251 aa13.21□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Dpm3Q9D1Q4 92 aa13.21□□□□□ -0.29
Ubr3-202ENSMUST00000112251 4930447F04RikA2AFR2 126 aa13.21□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Gm17677B3GLJ5 116 aa13.21□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Gm20219A0A1B0GRQ3 87 aa13.21□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Gm12353A2AGJ4 60 aa13.21□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Foxi3E0CZH3 425 aa13.21□□□□□ -0.29
Ubr3-202ENSMUST00000112251 Gm9881Q8BR56 211 aa13.21□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Igkv8-30A0A140T8M3 121 aa13.21□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Znrf2Q71FD5 238 aa13.21□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Carhsp1Q9CR86 148 aa13.21□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Ifitm1Q9D103 106 aa13.21□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Trav9n-4A0A075B631 113 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 AngP21570 145 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Prr15lQ8JZM2 100 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Trav7-6A0A075B640 112 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Trav11A0A0B4J1J9 114 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Minos1Q7TNS2 76 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Gtsf1Q9DAN6 167 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 P01790 122 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Rp1l1Q8CGM2 1859 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Gm12253Q5NC48 229 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Pygo2Q80V76 405 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Ighv1-36A0A0A6YXT2 117 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Clec4b2Q67DU8 208 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Tmem30bQ8BHG3 353 aa13.2□□□□□ -0.3
Ubr3-202ENSMUST00000112251 P01793 123 aa13.19□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Tomm6Q9CQN3 74 aa13.19□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Camk2n2Q78WH7 79 aa13.19□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Thsd7aQ69ZU6 1645 aa13.19□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Trav13d-4A0A0G2JFX3 110 aa13.19□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Cfap126Q6P8X9 189 aa13.19□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Reg3bP35230 175 aa13.18□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Ly6c1P0CW02 131 aa13.18□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Trav13n-2A0A0G2JF93 110 aa13.18□□□□□ -0.3
Ubr3-202ENSMUST00000112251 P01657 111 aa13.18□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Esm1Q9QYY7 184 aa13.18□□□□□ -0.3
Ubr3-202ENSMUST00000112251 P01791 123 aa13.18□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Pglyrp1O88593 182 aa13.18□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Atp6v0e2Q91XE7 81 aa13.18□□□□□ -0.3
Ubr3-202ENSMUST00000112251 1110002E22RikE0CYV9 1786 aa13.18□□□□□ -0.3
Ubr3-202ENSMUST00000112251 P01745 121 aa13.17□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Obsl1D3YYU8 1804 aaKnown RBP13.17□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Dennd4cA6H8H2 1906 aa13.17□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Hoxb4P10284 250 aa13.17□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Fgf6P21658 208 aa13.17□□□□□ -0.3
Ubr3-202ENSMUST00000112251 PifoQ9D9W1 207 aa13.17□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Ighv8-8A0A0A6YXQ0 119 aa13.17□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Gm20499D3Z4G5 72 aa13.17□□□□□ -0.3
Ubr3-202ENSMUST00000112251 OdaphJ3QNT8 126 aa13.17□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Mrps12O35680 139 aa13.17□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Tmem210Q9D2F0 147 aa13.16□□□□□ -0.3
Ubr3-202ENSMUST00000112251 P01675 107 aa13.16□□□□□ -0.3
Ubr3-202ENSMUST00000112251 P01676 107 aa13.16□□□□□ -0.3
Ubr3-202ENSMUST00000112251 P01677 107 aa13.16□□□□□ -0.3
Ubr3-202ENSMUST00000112251 P01678 107 aa13.16□□□□□ -0.3
Ubr3-202ENSMUST00000112251 A930003A15RikQ3U552 87 aa13.16□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Gm17521F6QAC8 156 aa13.16□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Lime1Q9EQR5 269 aa13.16□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Sox16Q62247 57 aa13.15□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Gm9961Q8BNV2 113 aa13.15□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Trav13-2A0A075B649 110 aa13.15□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Fam241bQ9D882 120 aa13.15□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Trav6-6A0A075B603 114 aa13.15□□□□□ -0.3
Ubr3-202ENSMUST00000112251 NpbQ8K4P1 119 aa13.15□□□□□ -0.3
Ubr3-202ENSMUST00000112251 Ighv3-6P18531 116 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Edn3P48299 214 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Lypd6Q8BPP5 171 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Igkv6-32A0A140T8N9 115 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Ndufb4Q9CQC7 129 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Trav14-1A0A0G2JF94 121 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Wfdc2Q9DAU7 174 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Gm10384Q3UQ87 92 aa13.14□□□□□ -0.31
Ubr3-202ENSMUST00000112251 Tmem14cQ9CQN6 114 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms