RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Bsph1Q3UW26 133 aa16.7■□□□□ 0.26
Scn1b-201ENSMUST00000098548 PdpnQ62011 172 aa16.7■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Gm10130F6ZHM5 101 aa16.69■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Mien1Q9CQ86 115 aa16.69■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Iah1Q9DB29 249 aa16.69■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Trav12-3A0A075B648 115 aa16.68■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Gm5157A0A087WRH8 301 aa16.68■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Gm20499D3Z4G5 72 aa16.68■□□□□ 0.26
Scn1b-201ENSMUST00000098548 1810062G17RikG3X8Y2 129 aa16.68■□□□□ 0.26
Scn1b-201ENSMUST00000098548 SeboxP70368 190 aa16.68■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Mrpl32Q9DCI9 187 aaKnown RBP16.68■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Trbv14A0A140T8L9 115 aa16.68■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Gm7075D3Z497 112 aa16.68■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Gm12888Q3UW77 119 aa16.68■□□□□ 0.26
Scn1b-201ENSMUST00000098548 PtprqP0C5E4 2300 aa16.67■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Trbv16A0A0B4J1H3 115 aa16.67■□□□□ 0.26
Scn1b-201ENSMUST00000098548 P01791 123 aa16.67■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Synj2bpQ9D6K5 145 aa16.67■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Ighv1-66A0A075B5X5 117 aa16.66■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Ighv2-6A0A075B6A7 116 aa16.66■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Smim10l1A0A087WNQ7 89 aa16.66■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Gm45623A0A1B0GSF6 103 aa16.66■□□□□ 0.26
Scn1b-201ENSMUST00000098548 P06328 117 aa16.66■□□□□ 0.26
Scn1b-201ENSMUST00000098548 P06334 169 aa16.66■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Mbd3l2Q3UXB0 228 aa16.66■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Il22ra1Q80XZ4 581 aa16.66■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Il19Q8CJ70 176 aa16.66■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Psmb2Q9R1P3 201 aa16.66■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Tmem238lA0A1B0GS74 79 aa16.65■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Q24JP4 165 aa16.65■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Gm5868Q8BJG1 145 aa16.65■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Olfr498Q8VEW2 330 aa16.65■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Gkn1Q9CR36 201 aa16.65■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Atg101Q9D8Z6 218 aa16.65■□□□□ 0.26
Scn1b-201ENSMUST00000098548 Trav16d-dv11A0A075B617 117 aa16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 1500009C09RikD3YYW9 81 aa16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Znf664Q4VA44 261 aa16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Gm10300Q8C8P7 189 aa16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 P01786 117 aa16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 TshbP12656 138 aa16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 MdfiP70331 251 aa16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Lyrm9Q3UN90 78 aa16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Olfr322Q5NCC8 327 aa16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Tppp3Q9CRB6 176 aaKnown RBP16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 CrygfQ9CXV3 174 aa16.64■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Pmp2P24526 132 aa16.63■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Malsu1Q9CWV0 228 aa16.63■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Q9D131 166 aa16.63■□□□□ 0.25
Scn1b-201ENSMUST00000098548 P06330 118 aa16.62■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Gm15294V9GXA7 121 aa16.62■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Lgals6O54891 301 aa16.61■□□□□ 0.25
Scn1b-201ENSMUST00000098548 P01747 120 aa16.61■□□□□ 0.25
Scn1b-201ENSMUST00000098548 1500011B03RikQ3TTH7 73 aa16.61■□□□□ 0.25
Scn1b-201ENSMUST00000098548 GalmQ8K157 342 aa16.61■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Ifi27l2aQ8R412 90 aa16.61■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Wfdc2Q9DAU7 174 aa16.61■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Arhgap32Q811P8 2089 aa16.6■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Trav14-2A0A075B694 121 aa16.6■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Gm17430F6RSK3 157 aa16.6■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Nutf2P61971 127 aa16.6■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Tmem208Q9CR96 173 aa16.6■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Esp3J3QN49 87 aa16.6■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Cd24P24807 76 aa16.6■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Khdc1cQ4KL78 166 aa16.6■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Gm29666A0A087WQ99 126 aa16.59■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Gm17732E9Q5I2 61 aa16.59■□□□□ 0.25
Scn1b-201ENSMUST00000098548 NpyP57774 97 aa16.59■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Ndufa4Q62425 82 aaKnown RBP16.59■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Cotl1Q9CQI6 142 aa16.59■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Cd164l2Q9D6W7 172 aa16.59■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Cend1Q9JKC6 149 aa16.59■□□□□ 0.25
Scn1b-201ENSMUST00000098548 Gm13030A2APQ6 143 aa16.58■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Tmem136Q3TYE7 245 aa16.58■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Ly6g5bQ8K1T4 194 aa16.58■□□□□ 0.24
Scn1b-201ENSMUST00000098548 AamdcQ8R0P4 122 aa16.58■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Klf13Q9JJZ6 289 aa16.58■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Rs1Q9Z1L4 224 aa16.58■□□□□ 0.24
Scn1b-201ENSMUST00000098548 PlnP61014 52 aa16.57■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Pla2g2eQ9QUL3 142 aa16.57■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Dnah6E9Q0B6 4144 aa16.57■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Igkv4-74A0A0B4J1I3 119 aa16.56■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Fam213bQ9DB60 201 aa16.56■□□□□ 0.24
Scn1b-201ENSMUST00000098548 P01753 117 aa16.55■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Sumo2P61957 95 aaKnown RBP16.55■□□□□ 0.24
Scn1b-201ENSMUST00000098548 MycbQ6P8Z1 170 aa16.55■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Vmn1r216Q8R257 298 aa16.55■□□□□ 0.24
Scn1b-201ENSMUST00000098548 4930470P17RikQ9D542 155 aa16.55■□□□□ 0.24
Scn1b-201ENSMUST00000098548 OtorQ9JIE3 128 aa16.55■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Sertad4A7DTG3 377 aa16.54■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Gm10271F6WY25 52 aa16.54■□□□□ 0.24
Scn1b-201ENSMUST00000098548 P01741 114 aa16.54■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Gng4P50153 75 aa16.54■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Rpl32P62911 135 aaKnown RBP16.54■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Pam16Q9CQV1 125 aa16.54■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Ormdl2Q9CQZ0 153 aa16.54■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Krtap27-1E9PX37 202 aa16.53■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Gm20458E9PXJ7 78 aa16.53■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Olfr313Q5NC55 308 aa16.53■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Rbm7Q9CQT2 265 aaKnown RBP16.53■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Olfr869E9PX82 323 aa16.52■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms