RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Wisp2Q9Z0G4 251 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Zfc3h1B2RT41 1992 aaKnown RBP6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Myo16Q5DU14 1919 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Igkv4-81A0A0G2JEY5 119 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 4930432M17RikQ3V0W9 174 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Odf1Q61999 247 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Spink2Q8BMY7 86 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Tnrc6bQ8BKI2 1810 aaKnown RBP6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Gm9112A2AI92 75 aa6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Lrp6O88572 1613 aa6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 SlpiP97430 131 aa6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 3110070M22RikQ9DAQ7 118 aa6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Pik3c2aQ61194 1686 aa6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Defb35Q8R2I3 63 aa6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Ccl26F8VQM2 93 aa6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Frmpd3A0A140LIW3 1774 aa6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 P01630 113 aa6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Gm9747Q810H1 104 aa6.5□□□□□ -1.37
Clcn3-202ENSMUST00000056508 EnhoQ8K1D8 76 aa6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Scn5aQ9JJV9 2019 aa6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Col22a1E9Q7P1 1613 aa6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Tmem190Q9D2E9 166 aa6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 2310057N15RikQ9D6T8 200 aa6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 1810032O08RikE9PZV8 113 aa6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Myo18aQ9JMH9 2050 aaKnown RBP6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 P01823 113 aa6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Cysrt1Q9D1E4 142 aa6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Ankrd31A0A140LI88 1765 aa6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 EvplQ9D952 2035 aa6.49□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Igkv6-25A0A140T8N7 115 aa6.48□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Tff2Q03404 129 aa6.48□□□□□ -1.37
Clcn3-202ENSMUST00000056508 P01660 111 aa6.48□□□□□ -1.37
Clcn3-202ENSMUST00000056508 AngP21570 145 aa6.48□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Crip3Q6Q6R3 243 aa6.48□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Dazap2Q9DCP9 168 aa6.48□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Trav4-4-dv10A0A075B651 110 aa6.47□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Rnase2bO35292 155 aa6.47□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Pik3c2bE9QAN8 1632 aa6.47□□□□□ -1.37
Clcn3-202ENSMUST00000056508 LtaP09225 202 aa6.47□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Col2a1P28481 1487 aa6.47□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Chd1P40201 1711 aa6.47□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Phf5aP83870 110 aaKnown RBP6.47□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Lypd5Q9D7Z7 256 aa6.47□□□□□ -1.37
Clcn3-202ENSMUST00000056508 TriobpQ99KW3 2014 aa6.46□□□□□ -1.37
Clcn3-202ENSMUST00000056508 4930426L09RikE9Q0N7 123 aa6.46□□□□□ -1.37
Clcn3-202ENSMUST00000056508 AmelxP63277 210 aa6.46□□□□□ -1.38
Clcn3-202ENSMUST00000056508 SbsponQ3UPR9 264 aa6.46□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Gm9945Q8BNZ3 91 aa6.46□□□□□ -1.38
Clcn3-202ENSMUST00000056508 4930442H23RikQ9D5G7 103 aa6.46□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Gm17455G3UW87 128 aa6.46□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Il9P15247 144 aa6.46□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Hmga1P17095 107 aaKnown RBP6.46□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Esm1Q9QYY7 184 aa6.46□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Mcm3apQ9WUU9 1971 aa6.46□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Igkv14-126A0A075B5K0 117 aa6.45□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Ndufa4Q62425 82 aaKnown RBP6.45□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Mia3Q8BI84 1930 aa6.45□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Ube2d1P61080 147 aaKnown RBP6.45□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Mrpl36Q99N90 102 aa6.45□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Scn1aA2APX8 2009 aa6.45□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Pde6gP09174 87 aa6.45□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Qser1A2BIE1 1698 aa6.45□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Spag17Q5S003 2320 aa6.44□□□□□ -1.38
Clcn3-202ENSMUST00000056508 AI854703Q8BIN3 203 aa6.44□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Adamtsl1Q8BLI0 1745 aa6.43□□□□□ -1.38
Clcn3-202ENSMUST00000056508 P01837 106 aa6.43□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Megf6Q80V70 1572 aa6.43□□□□□ -1.38
Clcn3-202ENSMUST00000056508 NinQ61043 2035 aa6.43□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Atg2bQ80XK6 2075 aa6.43□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Gm27235Q3UW50 83 aa6.43□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Chd4Q6PDQ2 1915 aaKnown RBP6.42□□□□□ -1.38
Clcn3-202ENSMUST00000056508 E030025P04RikA2A6V5 185 aa6.42□□□□□ -1.38
Clcn3-202ENSMUST00000056508 FshbQ60687 130 aa6.42□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Gm10295Q8CCF3 114 aa6.42□□□□□ -1.38
Clcn3-202ENSMUST00000056508 A0A286YE49 62 aa6.42□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Gm6899Q3USS0 134 aa6.42□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Abca3Q8R420 1704 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Topaz1E5FYH1 1653 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Med1Q925J9 1575 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Igkv4-57-1A0A075B5M4 119 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 E030018B13RikJ3QMS9 113 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Igkv4-86A0A0G2JGE7 114 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 P04943 107 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 PigyP0C1P0 71 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Defb47Q30KN1 79 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 EppinQ9DA01 134 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Scn8aQ9WTU3 1978 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Gm10283Q8C3L5 117 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Igkv6-23A0A140T8N5 115 aa6.41□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Gm9881Q8BR56 211 aa6.4□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Camta1A2A891 1682 aa6.4□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Igkv4-70A0A0B4J1I5 116 aa6.4□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Spint5J3KMK8 105 aa6.4□□□□□ -1.38
Clcn3-202ENSMUST00000056508 Igkv3-7A0A0G2JE31 119 aa6.4□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Rnf185Q91YT2 192 aa6.4□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Ccl3P10855 92 aa6.4□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Lhfpl6Q8BM86 200 aa6.4□□□□□ -1.39
Clcn3-202ENSMUST00000056508 4930564D02RikQ9D4S4 103 aa6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Smchd1Q6P5D8 2007 aaKnown RBP6.39□□□□□ -1.39
Clcn3-202ENSMUST00000056508 Wfdc5Q4KXB6 126 aa6.39□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms