RNA–Protein interactions for RNA: tF(GAA)N

tF(GAA)N, Transcript of Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis, yeastyeast

Gene tF(GAA)N, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tF(GAA)NtF(GAA)N SCH9P11792 824 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N PUT4P15380 627 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N MNE1P24720 663 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N MSH3P25336 1018 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N SNT1P25357 1226 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N HXT3P32466 567 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N LYP1P32487 611 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N PET309P32522 965 aaPredicted RBP3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N SPR1P32603 445 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N NRP1P32770 719 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
tF(GAA)NtF(GAA)N CYM1P32898 989 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N YKL151CP36059 337 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N TFA2P36145 328 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N JNM1P36224 373 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N ADE17P38009 592 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N KAP104P38217 918 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N YBR259WP38338 688 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N SMF1P38925 575 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N KHA1P40309 873 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N ZIM17P42844 174 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N SNZ3P43545 298 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N HXT16P47185 567 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N PMT3P47190 753 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N YGL260WP53056 76 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N NRD1P53617 575 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
tF(GAA)NtF(GAA)N SNZ2P53824 298 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N YNL040WP53960 456 aaPredicted RBP3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N HXT15P54854 567 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N INP2Q03824 705 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N EMI1Q04406 187 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N GFD1Q04839 188 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N SWC7Q06707 132 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N APC11Q12157 165 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N GLE1Q12315 538 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N GPR1Q12361 961 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N PNS1Q12412 539 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N SEC39Q12745 709 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N SEY1Q99287 776 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N DDP1Q99321 188 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N BI3Q9ZZW7 517 aa3.17□□□□□ -1.9
tF(GAA)NtF(GAA)N YPR089WO13585 888 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N IPP1P00817 287 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N RPS3P05750 240 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N TUB1P09733 447 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N PDC5P16467 563 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N DCC1P25559 380 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N AIM26P32858 118 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N SCD5P34758 872 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N YKL050CP35736 922 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N IRS4P36115 615 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N UBS1P38290 277 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N BIT2P38346 545 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N SRP72P38688 640 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N MSR1P38714 643 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N TDA3P38758 523 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N MIP6P38760 659 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N TMN3P40071 706 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N SLX8P40072 274 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N ATM1P40416 690 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N MMM1P41800 426 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N ALR2P43553 858 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N RRT5P43607 289 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N ROK1P45818 564 aaPredicted RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N NUP85P46673 744 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N MTO1P53070 669 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N SWC4P53201 476 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N ESBP6P53918 673 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N ARX1Q03862 593 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N APL5Q08951 932 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N PGC1Q08959 321 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N YPL272CQ08984 517 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N SRO7Q12038 1033 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N YDR061WQ12298 539 aa3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N EFG1Q3E705 233 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)NtF(GAA)N BRR2P32639 2163 aaKnown RBP3.15□□□□□ -1.9
tF(GAA)NtF(GAA)N AI4P03878 556 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N RPL43AP0CX25 92 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N RPL43BP0CX26 92 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N RPS6AP0CX37 236 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N RPS6BP0CX38 236 aaPredicted RBP3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N HOP1P20050 605 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N TRX1P22217 103 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N DBP2P24783 546 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N PTP1P25044 335 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N GSY2P27472 705 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N SEC65P29478 273 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N SPT16P32558 1035 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N ALY1P36117 915 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N PIM1P36775 1133 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N NCL1P38205 684 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N EFM2P38347 419 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N OTU2P38747 307 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N YHL008CP38750 627 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N RRM3P38766 723 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N FAU1P40099 211 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N MGS1P40151 587 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N TMA108P40462 946 aa3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N DLD2P46681 530 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N MNN11P46985 422 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)NtF(GAA)N YJR030CP47101 745 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms