RNA–Protein interactions for RNA: tF(GAA)D

tF(GAA)D, Transcript of Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis, yeastyeast

Gene tF(GAA)D, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tF(GAA)DtF(GAA)D SCH9P11792 824 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D PUT4P15380 627 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D MNE1P24720 663 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D MSH3P25336 1018 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D SNT1P25357 1226 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D HXT3P32466 567 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D LYP1P32487 611 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D PET309P32522 965 aaPredicted RBP3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D SPR1P32603 445 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D NRP1P32770 719 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
tF(GAA)DtF(GAA)D CYM1P32898 989 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D YKL151CP36059 337 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D TFA2P36145 328 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D JNM1P36224 373 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D ADE17P38009 592 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D KAP104P38217 918 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D YBR259WP38338 688 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D SMF1P38925 575 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D KHA1P40309 873 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D ZIM17P42844 174 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D SNZ3P43545 298 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D HXT16P47185 567 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D PMT3P47190 753 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D YGL260WP53056 76 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D NRD1P53617 575 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
tF(GAA)DtF(GAA)D SNZ2P53824 298 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D YNL040WP53960 456 aaPredicted RBP3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D HXT15P54854 567 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D INP2Q03824 705 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D EMI1Q04406 187 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D GFD1Q04839 188 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D SWC7Q06707 132 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D APC11Q12157 165 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D GLE1Q12315 538 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D GPR1Q12361 961 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D PNS1Q12412 539 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D SEC39Q12745 709 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D SEY1Q99287 776 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D DDP1Q99321 188 aaKnown RBP3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D BI3Q9ZZW7 517 aa3.17□□□□□ -1.9
tF(GAA)DtF(GAA)D YPR089WO13585 888 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D IPP1P00817 287 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D RPS3P05750 240 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D TUB1P09733 447 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D PDC5P16467 563 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D DCC1P25559 380 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D AIM26P32858 118 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D SCD5P34758 872 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D YKL050CP35736 922 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D IRS4P36115 615 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D UBS1P38290 277 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D BIT2P38346 545 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D SRP72P38688 640 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D MSR1P38714 643 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D TDA3P38758 523 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D MIP6P38760 659 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D TMN3P40071 706 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D SLX8P40072 274 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D ATM1P40416 690 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D MMM1P41800 426 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D ALR2P43553 858 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D RRT5P43607 289 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D ROK1P45818 564 aaPredicted RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D NUP85P46673 744 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D MTO1P53070 669 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D SWC4P53201 476 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D ESBP6P53918 673 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D ARX1Q03862 593 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D APL5Q08951 932 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D PGC1Q08959 321 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D YPL272CQ08984 517 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D SRO7Q12038 1033 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D YDR061WQ12298 539 aa3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D EFG1Q3E705 233 aaKnown RBP3.16□□□□□ -1.9
tF(GAA)DtF(GAA)D BRR2P32639 2163 aaKnown RBP3.15□□□□□ -1.9
tF(GAA)DtF(GAA)D AI4P03878 556 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D RPL43AP0CX25 92 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D RPL43BP0CX26 92 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D RPS6AP0CX37 236 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D RPS6BP0CX38 236 aaPredicted RBP3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D HOP1P20050 605 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D TRX1P22217 103 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D DBP2P24783 546 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D PTP1P25044 335 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D GSY2P27472 705 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D SEC65P29478 273 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D SPT16P32558 1035 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D ALY1P36117 915 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D PIM1P36775 1133 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D NCL1P38205 684 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D EFM2P38347 419 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D OTU2P38747 307 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D YHL008CP38750 627 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D RRM3P38766 723 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D FAU1P40099 211 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D MGS1P40151 587 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D TMA108P40462 946 aa3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D DLD2P46681 530 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D MNN11P46985 422 aaKnown RBP3.15□□□□□ -1.91
tF(GAA)DtF(GAA)D YJR030CP47101 745 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms