RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 PLC1P32383 869 aa0.33□□□□□ -2.36
snR50snR50 HOG1P32485 435 aa0.33□□□□□ -2.36
snR50snR50 CDC5P32562 705 aa0.33□□□□□ -2.36
snR50snR50 YKU70P32807 602 aa0.33□□□□□ -2.36
snR50snR50 PPG1P32838 368 aa0.33□□□□□ -2.36
snR50snR50 LOS1P33418 1100 aaPredicted RBP0.33□□□□□ -2.36
snR50snR50 MNN4P36044 1178 aa0.33□□□□□ -2.36
snR50snR50 CDS1P38221 457 aa0.33□□□□□ -2.36
snR50snR50 CRG1P38892 291 aaRIP-Chip data0.33□□□□□ -2.36not detected
snR50snR50 ERV46P39727 415 aa0.33□□□□□ -2.36
snR50snR50 NUG1P40010 520 aaKnown RBP0.33□□□□□ -2.36
snR50snR50 IML2P47031 731 aa0.33□□□□□ -2.36
snR50snR50 COG2P53271 262 aa0.33□□□□□ -2.36
snR50snR50 ESBP6P53918 673 aa0.33□□□□□ -2.36
snR50snR50 IZH1Q03419 316 aa0.33□□□□□ -2.36
snR50snR50 RCR2Q03446 210 aaKnown RBP0.33□□□□□ -2.36
snR50snR50 YMR210WQ03649 449 aa0.33□□□□□ -2.36
snR50snR50 MHR1Q06630 226 aa0.33□□□□□ -2.36
snR50snR50 PSR2Q07949 397 aa0.33□□□□□ -2.36
snR50snR50 DCS2Q12123 353 aa0.33□□□□□ -2.36
snR50snR50 PGI1P12709 554 aaKnown RBP0.32□□□□□ -2.36
snR50snR50 KGD2P19262 463 aaPredicted RBP0.32□□□□□ -2.36
snR50snR50 VPS33P20795 691 aa0.32□□□□□ -2.36
snR50snR50 CBP3P21560 335 aa0.32□□□□□ -2.36
snR50snR50 YCR061WP25639 631 aa0.32□□□□□ -2.36
snR50snR50 GDA1P32621 518 aa0.32□□□□□ -2.36
snR50snR50 BET3P36149 193 aa0.32□□□□□ -2.36
snR50snR50 MAL31P38156 614 aa0.32□□□□□ -2.36
snR50snR50 RTS1P38903 757 aa0.32□□□□□ -2.36
snR50snR50 YIR014WP40570 242 aa0.32□□□□□ -2.36
snR50snR50 YDL186WP48568 277 aa0.32□□□□□ -2.36
snR50snR50 UBP8P50102 471 aa0.32□□□□□ -2.36
snR50snR50 BTN2P53286 410 aa0.32□□□□□ -2.36
snR50snR50 YNL181WP53878 407 aa0.32□□□□□ -2.36
snR50snR50 NOP15P53927 220 aaPredicted RBP0.32□□□□□ -2.36
snR50snR50 YLR152CP54072 576 aa0.32□□□□□ -2.36
snR50snR50 TIM50Q02776 476 aa0.32□□□□□ -2.36
snR50snR50 YMR178WQ03219 274 aaKnown RBP0.32□□□□□ -2.36
snR50snR50 SWF1Q04629 336 aa0.32□□□□□ -2.36
snR50snR50 RSF1Q05043 376 aa0.32□□□□□ -2.36
snR50snR50 YPS7Q06325 596 aa0.32□□□□□ -2.36
snR50snR50 YOR389WQ08912 624 aa0.32□□□□□ -2.36
snR50snR50 AIM41Q12032 185 aa0.32□□□□□ -2.36
snR50snR50 LCB4Q12246 624 aa0.32□□□□□ -2.36
snR50snR50 Q0010Q9ZZX9 128 aa0.32□□□□□ -2.36
snR50snR50 RRP43P25359 394 aaPredicted RBP0.31□□□□□ -2.36
snR50snR50 MSS51P32335 436 aa0.31□□□□□ -2.36
snR50snR50 OCT1P35999 772 aa0.31□□□□□ -2.36
snR50snR50 BMT2P38278 337 aa0.31□□□□□ -2.36
snR50snR50 SDH8P38345 138 aa0.31□□□□□ -2.36
snR50snR50 LEU5P38702 357 aa0.31□□□□□ -2.36
snR50snR50 YJL193WP39542 402 aa0.31□□□□□ -2.36
snR50snR50 TIF4631P39935 952 aaKnown RBP0.31□□□□□ -2.36
snR50snR50 PRM2P40534 656 aa0.31□□□□□ -2.36
snR50snR50 RTS2P40962 232 aa0.31□□□□□ -2.36
snR50snR50 YJL049WP47048 450 aa0.31□□□□□ -2.36
snR50snR50 TAF4P50105 388 aa0.31□□□□□ -2.36
snR50snR50 MAL11P53048 616 aa0.31□□□□□ -2.36
snR50snR50 YAT1P80235 687 aa0.31□□□□□ -2.36
snR50snR50 PLM2Q04383 521 aa0.31□□□□□ -2.36
snR50snR50 HCR1Q05775 265 aaKnown RBP0.31□□□□□ -2.36
snR50snR50 PIG1Q06216 648 aa0.31□□□□□ -2.36
snR50snR50 YLR112WQ12130 139 aa0.31□□□□□ -2.36
snR50snR50 RTC1Q08281 1341 aa0.31□□□□□ -2.36
snR50snR50 SUP35P05453 685 aaKnown RBP0.3□□□□□ -2.36
snR50snR50 POL3P15436 1097 aa0.3□□□□□ -2.36
snR50snR50 GUK1P15454 187 aaKnown RBP0.3□□□□□ -2.36
snR50snR50 BET2P20133 325 aa0.3□□□□□ -2.36
snR50snR50 GRX1P25373 110 aaKnown RBP0.3□□□□□ -2.36
snR50snR50 MGR1P25573 417 aa0.3□□□□□ -2.36
snR50snR50 TRS65P32893 560 aa0.3□□□□□ -2.36
snR50snR50 YKR075CP36155 307 aa0.3□□□□□ -2.36
snR50snR50 YPK3P38070 525 aa0.3□□□□□ -2.36
snR50snR50 TIF5P38431 405 aaKnown RBP0.3□□□□□ -2.36
snR50snR50 DOT6P40059 670 aaKnown RBP0.3□□□□□ -2.36
snR50snR50 CDC1P40986 491 aa0.3□□□□□ -2.36
snR50snR50 DIM1P41819 318 aaKnown RBP0.3□□□□□ -2.36
snR50snR50 YDL183CP48569 320 aa0.3□□□□□ -2.36
snR50snR50 ALD6P54115 500 aaKnown RBP0.3□□□□□ -2.36
snR50snR50 STP3Q05937 343 aa0.3□□□□□ -2.36
snR50snR50 YLR407WQ06070 228 aa0.3□□□□□ -2.36
snR50snR50 PDR8Q06149 701 aa0.3□□□□□ -2.36
snR50snR50 YCG1Q06680 1035 aa0.3□□□□□ -2.36
snR50snR50 YPL191CQ08930 360 aa0.3□□□□□ -2.36
snR50snR50 MDM12Q92328 271 aa0.3□□□□□ -2.36
snR50snR50 CDC9P04819 755 aa0.29□□□□□ -2.36
snR50snR50 GDH1P07262 454 aaKnown RBP0.29□□□□□ -2.36
snR50snR50 SES1P07284 462 aaKnown RBP0.29□□□□□ -2.36
snR50snR50 SWI6P09959 803 aa0.29□□□□□ -2.36
snR50snR50 AMD2P22580 549 aa0.29□□□□□ -2.36
snR50snR50 SGF29P25554 259 aa0.29□□□□□ -2.36
snR50snR50 SFP1P32432 683 aa0.29□□□□□ -2.36
snR50snR50 DSS4P32601 143 aa0.29□□□□□ -2.36
snR50snR50 MTC7P32633 139 aa0.29□□□□□ -2.36
snR50snR50 HCS1P34243 683 aa0.29□□□□□ -2.36
snR50snR50 VBA2P38358 474 aaKnown RBP0.29□□□□□ -2.36
snR50snR50 PCM1P38628 557 aaKnown RBP0.29□□□□□ -2.36
snR50snR50 VPS8P39702 1274 aa0.29□□□□□ -2.36
snR50snR50 GDH3P39708 457 aa0.29□□□□□ -2.36
snR50snR50 SAP1P39955 897 aaKnown RBP0.29□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms