RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W CIN1P40987 1014 aa2.28□□□□□ -2.04
YOP1YPR028W YGR237CP50089 785 aa2.28□□□□□ -2.04
YOP1YPR028W COG2P53271 262 aa2.28□□□□□ -2.04
YOP1YPR028W NUP145P49687 1317 aa2.27□□□□□ -2.05
YOP1YPR028W GAL4P04386 881 aa2.27□□□□□ -2.05
YOP1YPR028W ATP12P22135 325 aa2.27□□□□□ -2.05
YOP1YPR028W FAA2P39518 744 aa2.27□□□□□ -2.05
YOP1YPR028W UBP12P39538 1254 aa2.27□□□□□ -2.05
YOP1YPR028W ZAP1P47043 880 aa2.27□□□□□ -2.05
YOP1YPR028W YGL081WP53156 320 aa2.27□□□□□ -2.05
YOP1YPR028W YNL144CP53907 740 aa2.27□□□□□ -2.05
YOP1YPR028W PTA1Q01329 785 aaPredicted RBP2.27□□□□□ -2.05
YOP1YPR028W FCP1Q03254 732 aa2.27□□□□□ -2.05
YOP1YPR028W PFA4Q12006 378 aa2.27□□□□□ -2.05
YOP1YPR028W FAP7Q12055 197 aaPredicted RBP2.27□□□□□ -2.05
YOP1YPR028W GET3Q12154 354 aaKnown RBP2.27□□□□□ -2.05
YOP1YPR028W PRP16P15938 1071 aaPredicted RBP2.26□□□□□ -2.05
YOP1YPR028W MAK32P23060 363 aa2.26□□□□□ -2.05
YOP1YPR028W PPZ1P26570 692 aa2.26□□□□□ -2.05
YOP1YPR028W CDC5P32562 705 aa2.26□□□□□ -2.05
YOP1YPR028W SER1P33330 395 aaKnown RBP2.26□□□□□ -2.05
YOP1YPR028W RRP8P38961 392 aaKnown RBP2.26□□□□□ -2.05
YOP1YPR028W GPP2P40106 250 aaKnown RBP2.26□□□□□ -2.05
YOP1YPR028W YPT11P48559 417 aa2.26□□□□□ -2.05
YOP1YPR028W ECM22Q05958 814 aaPredicted RBP2.26□□□□□ -2.05
YOP1YPR028W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
YOP1YPR028W RTC1Q08281 1341 aa2.25□□□□□ -2.05
YOP1YPR028W SEC18P18759 758 aaKnown RBP2.25□□□□□ -2.05
YOP1YPR028W DGR2P32330 852 aa2.25□□□□□ -2.05
YOP1YPR028W HXT4P32467 576 aa2.25□□□□□ -2.05
YOP1YPR028W RMA1P36001 430 aaKnown RBP2.25□□□□□ -2.05
YOP1YPR028W LAS21P40367 830 aa2.25□□□□□ -2.05
YOP1YPR028W DUG1P43616 481 aaKnown RBP2.25□□□□□ -2.05
YOP1YPR028W MDR1P53258 950 aa2.25□□□□□ -2.05
YOP1YPR028W NGL1Q08213 363 aaKnown RBP2.25□□□□□ -2.05
YOP1YPR028W RRI1Q12468 440 aa2.25□□□□□ -2.05
YOP1YPR028W YER175W-AQ8TGU4 54 aa2.25□□□□□ -2.05
YOP1YPR028W AEP2P22136 580 aa2.24□□□□□ -2.05
YOP1YPR028W CNA1P23287 553 aa2.24□□□□□ -2.05
YOP1YPR028W SDH8P38345 138 aa2.24□□□□□ -2.05
YOP1YPR028W IRC5P43610 853 aa2.24□□□□□ -2.05
YOP1YPR028W YNL092WP53934 400 aa2.24□□□□□ -2.05
YOP1YPR028W PLM2Q04383 521 aa2.24□□□□□ -2.05
YOP1YPR028W CBP3P21560 335 aa2.23□□□□□ -2.05
YOP1YPR028W RRP43P25359 394 aaPredicted RBP2.23□□□□□ -2.05
YOP1YPR028W GRX4P32642 244 aa2.23□□□□□ -2.05
YOP1YPR028W MAM1P40065 302 aa2.23□□□□□ -2.05
YOP1YPR028W NOP2P40991 618 aaKnown RBP2.23□□□□□ -2.05
YOP1YPR028W AZF1P41696 914 aa2.23□□□□□ -2.05
YOP1YPR028W NIT2P47016 307 aa2.23□□□□□ -2.05
YOP1YPR028W UBP16Q02863 499 aa2.23□□□□□ -2.05
YOP1YPR028W DIG1Q03063 452 aaKnown RBP2.23□□□□□ -2.05
YOP1YPR028W SKY1Q03656 742 aa2.23□□□□□ -2.05
YOP1YPR028W LYS21Q12122 440 aaKnown RBP2.23□□□□□ -2.05
YOP1YPR028W PLC1P32383 869 aa2.22□□□□□ -2.05
YOP1YPR028W KES1P35844 434 aaKnown RBP2.22□□□□□ -2.05
YOP1YPR028W RKM3P38222 552 aa2.22□□□□□ -2.05
YOP1YPR028W LNP1P38878 278 aa2.22□□□□□ -2.05
YOP1YPR028W YEN1P40028 759 aa2.22□□□□□ -2.05
YOP1YPR028W RNR4P49723 345 aaKnown RBP2.22□□□□□ -2.05
YOP1YPR028W PEF1P53238 335 aa2.22□□□□□ -2.05
YOP1YPR028W BET4Q00618 327 aa2.22□□□□□ -2.05
YOP1YPR028W YML119WQ03208 357 aa2.22□□□□□ -2.05
YOP1YPR028W YLR281CQ05863 155 aa2.22□□□□□ -2.05
YOP1YPR028W GSH2Q08220 491 aa2.22□□□□□ -2.05
YOP1YPR028W YOR378WQ08902 515 aa2.22□□□□□ -2.05
YOP1YPR028W RSA1Q08932 381 aa2.22□□□□□ -2.05
YOP1YPR028W YPR027CQ12079 277 aa2.22□□□□□ -2.05
YOP1YPR028W TIP41Q12199 356 aa2.22□□□□□ -2.05
YOP1YPR028W RMP1Q12530 201 aa2.22□□□□□ -2.05
YOP1YPR028W CHO2P05374 869 aaKnown RBP2.21□□□□□ -2.06
YOP1YPR028W HEM12P32347 362 aaPredicted RBP2.21□□□□□ -2.06
YOP1YPR028W YBR071WP38243 211 aa2.21□□□□□ -2.06
YOP1YPR028W ENP1P38333 483 aaKnown RBP2.21□□□□□ -2.06
YOP1YPR028W SRP68P38687 599 aaKnown RBP2.21□□□□□ -2.06
YOP1YPR028W SAP1P39955 897 aaKnown RBP2.21□□□□□ -2.06
YOP1YPR028W EAF5P39995 279 aa2.21□□□□□ -2.06
YOP1YPR028W YJR120WP47157 116 aa2.21□□□□□ -2.06
YOP1YPR028W ORC5P50874 479 aa2.21□□□□□ -2.06
YOP1YPR028W RAD34Q06665 692 aa2.21□□□□□ -2.06
YOP1YPR028W RPL42AP0CX27 106 aaKnown RBP2.2□□□□□ -2.06
YOP1YPR028W RPL42BP0CX28 106 aaKnown RBP2.2□□□□□ -2.06
YOP1YPR028W YFL068WP0CX99 160 aa2.2□□□□□ -2.06
YOP1YPR028W YLL066W-AP0CY00 160 aa2.2□□□□□ -2.06
YOP1YPR028W YLL067W-AP0CY01 160 aa2.2□□□□□ -2.06
YOP1YPR028W AMD2P22580 549 aa2.2□□□□□ -2.06
YOP1YPR028W CWH43P25618 953 aa2.2□□□□□ -2.06
YOP1YPR028W MSS51P32335 436 aa2.2□□□□□ -2.06
YOP1YPR028W NIC96P34077 839 aa2.2□□□□□ -2.06
YOP1YPR028W YJL107CP42947 387 aa2.2□□□□□ -2.06
YOP1YPR028W MNT2P53059 558 aa2.2□□□□□ -2.06
YOP1YPR028W IMP4P53941 290 aaKnown RBP2.2□□□□□ -2.06
YOP1YPR028W COG6P53959 839 aa2.2□□□□□ -2.06
YOP1YPR028W ARA2Q04212 335 aa2.2□□□□□ -2.06
YOP1YPR028W YML053CQ04978 212 aa2.2□□□□□ -2.06
YOP1YPR028W CWC2Q12046 339 aaPredicted RBP2.2□□□□□ -2.06
YOP1YPR028W DIN7Q12086 430 aa2.2□□□□□ -2.06
YOP1YPR028W RTK1Q12100 620 aaPredicted RBP2.2□□□□□ -2.06
YOP1YPR028W TMA17Q12513 150 aa2.2□□□□□ -2.06
YOP1YPR028W COX11P19516 300 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms