RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W SSH4P32343 579 aa3.01□□□□□ -1.93
PEP12YOR036W FRD1P32614 470 aaKnown RBP3.01□□□□□ -1.93
PEP12YOR036W RMA1P36001 430 aaKnown RBP3.01□□□□□ -1.93
PEP12YOR036W STT3P39007 718 aaKnown RBP3.01□□□□□ -1.93
PEP12YOR036W JHD1P40034 492 aa3.01□□□□□ -1.93
PEP12YOR036W ERR3P42222 437 aa3.01□□□□□ -1.93
PEP12YOR036W SQS1P53866 767 aaKnown RBP3.01□□□□□ -1.93
PEP12YOR036W FDC1Q03034 503 aa3.01□□□□□ -1.93
PEP12YOR036W BLS1Q06071 122 aa3.01□□□□□ -1.93
PEP12YOR036W YCG1Q06680 1035 aa3.01□□□□□ -1.93
PEP12YOR036W TUF1P02992 437 aaKnown RBP3□□□□□ -1.93
PEP12YOR036W URA3P03962 267 aa3□□□□□ -1.93
PEP12YOR036W RPS9BP05755 195 aaKnown RBP3□□□□□ -1.93
PEP12YOR036W MTF2P10849 440 aa3□□□□□ -1.93
PEP12YOR036W YAP1P19880 650 aaKnown RBP3□□□□□ -1.93
PEP12YOR036W SEC15P22224 910 aa3□□□□□ -1.93
PEP12YOR036W ARG1P22768 420 aa3□□□□□ -1.93
PEP12YOR036W YCL049CP25577 312 aa3□□□□□ -1.93
PEP12YOR036W PRP45P28004 379 aaPredicted RBP3□□□□□ -1.93
PEP12YOR036W RPC34P32910 317 aa3□□□□□ -1.93
PEP12YOR036W XRS2P33301 854 aa3□□□□□ -1.93
PEP12YOR036W CRG1P38892 291 aaRIP-Chip data3□□□□□ -1.93not detected
PEP12YOR036W FTR1P40088 404 aa3□□□□□ -1.93
PEP12YOR036W VID27P40157 782 aa3□□□□□ -1.93
PEP12YOR036W ARC35P53731 342 aaKnown RBP3□□□□□ -1.93
PEP12YOR036W GTR1Q00582 310 aa3□□□□□ -1.93
PEP12YOR036W NUP53Q03790 475 aa3□□□□□ -1.93
PEP12YOR036W CRD1Q07560 283 aa3□□□□□ -1.93
PEP12YOR036W SSP2Q08646 371 aa3□□□□□ -1.93
PEP12YOR036W CRC1Q12289 327 aa3□□□□□ -1.93
PEP12YOR036W SEC3P33332 1336 aaKnown RBP2.99□□□□□ -1.93
PEP12YOR036W MCM3P24279 971 aaKnown RBP2.99□□□□□ -1.93
PEP12YOR036W PSY4P38193 441 aa2.99□□□□□ -1.93
PEP12YOR036W GSM1P42950 618 aa2.99□□□□□ -1.93
PEP12YOR036W IML2P47031 731 aa2.99□□□□□ -1.93
PEP12YOR036W YJL043WP47053 257 aa2.99□□□□□ -1.93
PEP12YOR036W YIP4P53093 235 aa2.99□□□□□ -1.93
PEP12YOR036W TFC6Q06339 672 aa2.99□□□□□ -1.93
PEP12YOR036W OPY2Q06810 360 aa2.99□□□□□ -1.93
PEP12YOR036W AAD4Q07747 329 aa2.99□□□□□ -1.93
PEP12YOR036W AIM41Q12032 185 aa2.99□□□□□ -1.93
PEP12YOR036W HOS1Q12214 470 aa2.99□□□□□ -1.93
PEP12YOR036W SSM4P40318 1319 aa2.98□□□□□ -1.93
PEP12YOR036W MIS1P09440 975 aaKnown RBP2.98□□□□□ -1.93
PEP12YOR036W BIK1P11709 440 aa2.98□□□□□ -1.93
PEP12YOR036W NCP1P16603 691 aaKnown RBP2.98□□□□□ -1.93
PEP12YOR036W APD1P38281 316 aa2.98□□□□□ -1.93
PEP12YOR036W PIH1P38768 344 aa2.98□□□□□ -1.93
PEP12YOR036W PUG1P40100 303 aa2.98□□□□□ -1.93
PEP12YOR036W THI6P41835 540 aa2.98□□□□□ -1.93
PEP12YOR036W IMA1P53051 589 aa2.98□□□□□ -1.93
PEP12YOR036W IDP3P53982 420 aaKnown RBP2.98□□□□□ -1.93
PEP12YOR036W IWR1Q07532 353 aaPredicted RBP2.98□□□□□ -1.93
PEP12YOR036W HER1Q12276 1246 aa2.98□□□□□ -1.93
PEP12YOR036W RRI2Q12348 645 aa2.98□□□□□ -1.93
PEP12YOR036W YLR111WQ12528 110 aa2.98□□□□□ -1.93
PEP12YOR036W POL3P15436 1097 aa2.97□□□□□ -1.93
PEP12YOR036W VPS33P20795 691 aa2.97□□□□□ -1.93
PEP12YOR036W UBC1P21734 215 aaKnown RBP2.97□□□□□ -1.93
PEP12YOR036W URE2P23202 354 aaKnown RBP2.97□□□□□ -1.93
PEP12YOR036W MCM10P32354 571 aa2.97□□□□□ -1.93
PEP12YOR036W RRN3P36070 627 aa2.97□□□□□ -1.93
PEP12YOR036W YBR138CP38277 524 aa2.97□□□□□ -1.93
PEP12YOR036W EHT1P38295 451 aa2.97□□□□□ -1.93
PEP12YOR036W NPR3P38742 1146 aa2.97□□□□□ -1.93
PEP12YOR036W PPE1P38796 400 aa2.97□□□□□ -1.93
PEP12YOR036W EXO1P39875 702 aa2.97□□□□□ -1.93
PEP12YOR036W LRO1P40345 661 aa2.97□□□□□ -1.93
PEP12YOR036W RAD26P40352 1085 aa2.97□□□□□ -1.93
PEP12YOR036W POL31P46957 487 aa2.97□□□□□ -1.93
PEP12YOR036W BNA1P47096 177 aa2.97□□□□□ -1.93
PEP12YOR036W MDR1P53258 950 aa2.97□□□□□ -1.93
PEP12YOR036W COQ6P53318 479 aa2.97□□□□□ -1.93
PEP12YOR036W MRPL13Q02204 264 aa2.97□□□□□ -1.93
PEP12YOR036W ENT2Q05785 613 aa2.97□□□□□ -1.93
PEP12YOR036W BSP1Q06604 576 aa2.97□□□□□ -1.93
PEP12YOR036W YPR089WO13585 888 aa2.96□□□□□ -1.94
PEP12YOR036W YMR085WP0CF18 432 aa2.96□□□□□ -1.94
PEP12YOR036W HSC82P15108 705 aaKnown RBP2.96□□□□□ -1.94
PEP12YOR036W RIT1P23796 513 aa2.96□□□□□ -1.94
PEP12YOR036W CLB4P24871 460 aa2.96□□□□□ -1.94
PEP12YOR036W RER1P25560 188 aa2.96□□□□□ -1.94
PEP12YOR036W YJL193WP39542 402 aa2.96□□□□□ -1.94
PEP12YOR036W ERP2P39704 215 aa2.96□□□□□ -1.94
PEP12YOR036W TMN3P40071 706 aa2.96□□□□□ -1.94
PEP12YOR036W OPT1P40897 799 aa2.96□□□□□ -1.94
PEP12YOR036W SMK1P41808 388 aa2.96□□□□□ -1.94
PEP12YOR036W CTF18P49956 741 aa2.96□□□□□ -1.94
PEP12YOR036W MEP3P53390 489 aa2.96□□□□□ -1.94
PEP12YOR036W ACS1Q01574 713 aa2.96□□□□□ -1.94
PEP12YOR036W TIM50Q02776 476 aa2.96□□□□□ -1.94
PEP12YOR036W TRS31Q03337 283 aa2.96□□□□□ -1.94
PEP12YOR036W COG4Q06096 861 aa2.96□□□□□ -1.94
PEP12YOR036W ARR3Q06598 404 aa2.96□□□□□ -1.94
PEP12YOR036W ADE3P07245 946 aaKnown RBP2.95□□□□□ -1.94
PEP12YOR036W YER190C-BP0CX94 160 aa2.95□□□□□ -1.94
PEP12YOR036W YEL077W-AP0CX95 160 aa2.95□□□□□ -1.94
PEP12YOR036W YGR296C-BP0CX96 160 aa2.95□□□□□ -1.94
PEP12YOR036W YPL283W-BP0CX97 160 aa2.95□□□□□ -1.94
PEP12YOR036W YPR204C-AP0CX98 160 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms