RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W VPS64Q03944 604 aa3.27□□□□□ -1.89
RRI2YOL117W RRP6Q12149 733 aaKnown RBP3.27□□□□□ -1.89
RRI2YOL117W AHA1Q12449 350 aaKnown RBP3.27□□□□□ -1.89
RRI2YOL117W BIK1P11709 440 aa3.27□□□□□ -1.89
RRI2YOL117W MCM3P24279 971 aaKnown RBP3.27□□□□□ -1.89
RRI2YOL117W RRP43P25359 394 aaPredicted RBP3.27□□□□□ -1.89
RRI2YOL117W APD1P38281 316 aa3.27□□□□□ -1.89
RRI2YOL117W YHL041WP38730 149 aa3.27□□□□□ -1.89
RRI2YOL117W SPC72P39723 622 aa3.27□□□□□ -1.89
RRI2YOL117W LAS21P40367 830 aa3.27□□□□□ -1.89
RRI2YOL117W CYK3Q07533 885 aa3.27□□□□□ -1.89
RRI2YOL117W YOL057WQ08225 711 aa3.27□□□□□ -1.89
RRI2YOL117W PIF1P07271 859 aa3.26□□□□□ -1.89
RRI2YOL117W KES1P35844 434 aaKnown RBP3.26□□□□□ -1.89
RRI2YOL117W NMD5P46970 1048 aa3.26□□□□□ -1.89
RRI2YOL117W YJL043WP47053 257 aa3.26□□□□□ -1.89
RRI2YOL117W ESF2P53743 316 aaKnown RBP3.26□□□□□ -1.89
RRI2YOL117W CRF1Q04930 467 aa3.26□□□□□ -1.89
RRI2YOL117W BSP1Q06604 576 aa3.26□□□□□ -1.89
RRI2YOL117W YBR255C-AQ3E776 120 aa3.26□□□□□ -1.89
RRI2YOL117W NUP1P20676 1076 aa3.25□□□□□ -1.89
RRI2YOL117W RPT2P40327 437 aaKnown RBP3.25□□□□□ -1.89
RRI2YOL117W LTP1P40347 161 aa3.25□□□□□ -1.89
RRI2YOL117W CPR6P53691 371 aaKnown RBP3.25□□□□□ -1.89
RRI2YOL117W RAD34Q06665 692 aa3.25□□□□□ -1.89
RRI2YOL117W CTT1P06115 562 aa3.25□□□□□ -1.89
RRI2YOL117W SES1P07284 462 aaKnown RBP3.25□□□□□ -1.89
RRI2YOL117W BPL1P48445 690 aaPredicted RBP3.25□□□□□ -1.89
RRI2YOL117W ATP23P53722 227 aa3.25□□□□□ -1.89
RRI2YOL117W IWR1Q07532 353 aaPredicted RBP3.25□□□□□ -1.89
RRI2YOL117W YER175W-AQ8TGU4 54 aa3.25□□□□□ -1.89
RRI2YOL117W PNO1Q99216 274 aaKnown RBP3.25□□□□□ -1.89
RRI2YOL117W APM3P38153 483 aa3.24□□□□□ -1.89
RRI2YOL117W IMD2P38697 523 aaKnown RBP3.24□□□□□ -1.89
RRI2YOL117W SAP1P39955 897 aaKnown RBP3.24□□□□□ -1.89
RRI2YOL117W BUD16P39988 312 aa3.24□□□□□ -1.89
RRI2YOL117W ATG36P46983 293 aa3.24□□□□□ -1.89
RRI2YOL117W IMD3P50095 523 aaKnown RBP3.24□□□□□ -1.89
RRI2YOL117W IMA1P53051 589 aa3.24□□□□□ -1.89
RRI2YOL117W COG2P53271 262 aa3.24□□□□□ -1.89
RRI2YOL117W IOC4Q04213 475 aa3.24□□□□□ -1.89
RRI2YOL117W CIA1Q05583 330 aa3.24□□□□□ -1.89
RRI2YOL117W SUL2Q12325 893 aa3.24□□□□□ -1.89
RRI2YOL117W CET1O13297 549 aaPredicted RBP3.23□□□□□ -1.89
RRI2YOL117W ADE3P07245 946 aaKnown RBP3.23□□□□□ -1.89
RRI2YOL117W POL3P15436 1097 aa3.23□□□□□ -1.89
RRI2YOL117W BEM3P32873 1128 aa3.23□□□□□ -1.89
RRI2YOL117W MTG2P38860 518 aa3.23□□□□□ -1.89
RRI2YOL117W RSC9Q03124 581 aa3.23□□□□□ -1.89
RRI2YOL117W PLM2Q04383 521 aa3.23□□□□□ -1.89
RRI2YOL117W SWI4P25302 1093 aaKnown RBP3.23□□□□□ -1.89
RRI2YOL117W VBA2P38358 474 aaKnown RBP3.23□□□□□ -1.89
RRI2YOL117W ERC1P38767 581 aa3.23□□□□□ -1.89
RRI2YOL117W UBP7P40453 1071 aa3.23□□□□□ -1.89
RRI2YOL117W XBP1P40489 647 aa3.23□□□□□ -1.89
RRI2YOL117W CAB2P40506 365 aa3.23□□□□□ -1.89
RRI2YOL117W ULP2P40537 1034 aaPredicted RBP3.23□□□□□ -1.89
RRI2YOL117W NOP2P40991 618 aaKnown RBP3.23□□□□□ -1.89
RRI2YOL117W CIR1P42940 261 aa3.23□□□□□ -1.89
RRI2YOL117W YML053CQ04978 212 aa3.23□□□□□ -1.89
RRI2YOL117W HIM1Q06674 414 aa3.23□□□□□ -1.89
RRI2YOL117W IRC3Q06683 689 aa3.23□□□□□ -1.89
RRI2YOL117W YPL191CQ08930 360 aa3.23□□□□□ -1.89
RRI2YOL117W LYS21Q12122 440 aaKnown RBP3.23□□□□□ -1.89
RRI2YOL117W RIT1P23796 513 aa3.22□□□□□ -1.89
RRI2YOL117W ECM32P32644 1121 aaKnown RBP3.22□□□□□ -1.89
RRI2YOL117W GEX2P36173 615 aa3.22□□□□□ -1.89
RRI2YOL117W YBR138CP38277 524 aa3.22□□□□□ -1.89
RRI2YOL117W CIN1P40987 1014 aa3.22□□□□□ -1.89
RRI2YOL117W YAT1P80235 687 aa3.22□□□□□ -1.89
RRI2YOL117W PRS5Q12265 496 aaKnown RBP3.22□□□□□ -1.89
RRI2YOL117W RTC1Q08281 1341 aa3.22□□□□□ -1.89
RRI2YOL117W SEC18P18759 758 aaKnown RBP3.21□□□□□ -1.9
RRI2YOL117W MSH1P25846 959 aa3.21□□□□□ -1.9
RRI2YOL117W ARP2P32381 391 aaKnown RBP3.21□□□□□ -1.9
RRI2YOL117W GSH1P32477 678 aa3.21□□□□□ -1.9
RRI2YOL117W FTH1P38310 465 aa3.21□□□□□ -1.9
RRI2YOL117W ACA1P39970 489 aa3.21□□□□□ -1.9
RRI2YOL117W PUG1P40100 303 aa3.21□□□□□ -1.9
RRI2YOL117W NPA3P47122 385 aa3.21□□□□□ -1.9
RRI2YOL117W YPT1P01123 206 aaKnown RBP3.21□□□□□ -1.9
RRI2YOL117W APA1P16550 321 aaKnown RBP3.21□□□□□ -1.9
RRI2YOL117W PDE1P22434 369 aa3.21□□□□□ -1.9
RRI2YOL117W URK1P27515 501 aa3.21□□□□□ -1.9
RRI2YOL117W HES1P35843 434 aa3.21□□□□□ -1.9
RRI2YOL117W LNP1P38878 278 aa3.21□□□□□ -1.9
RRI2YOL117W ERV46P39727 415 aa3.21□□□□□ -1.9
RRI2YOL117W TAM41P53230 385 aa3.21□□□□□ -1.9
RRI2YOL117W YNL058CP53947 316 aa3.21□□□□□ -1.9
RRI2YOL117W IDP3P53982 420 aaKnown RBP3.21□□□□□ -1.9
RRI2YOL117W UBX4P54730 416 aa3.21□□□□□ -1.9
RRI2YOL117W ARA2Q04212 335 aa3.21□□□□□ -1.9
RRI2YOL117W GTB1Q04924 702 aa3.21□□□□□ -1.9
RRI2YOL117W TPO3Q06451 622 aa3.21□□□□□ -1.9
RRI2YOL117W NYV1Q12255 253 aa3.21□□□□□ -1.9
RRI2YOL117W NCP1P16603 691 aaKnown RBP3.2□□□□□ -1.9
RRI2YOL117W RPF2P36160 344 aaKnown RBP3.2□□□□□ -1.9
RRI2YOL117W NET1P47035 1189 aa3.2□□□□□ -1.9
RRI2YOL117W TAN1P53072 289 aaPredicted RBP3.2□□□□□ -1.9
RRI2YOL117W PAP2P53632 584 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms