RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C GRX6Q12438 231 aa3.57□□□□□ -1.84
ATG3YNR007C CPA2P03965 1118 aaKnown RBP3.56□□□□□ -1.84
ATG3YNR007C CNE1P27825 502 aa3.56□□□□□ -1.84
ATG3YNR007C PRE4P30657 266 aa3.56□□□□□ -1.84
ATG3YNR007C PRP19P32523 503 aaKnown RBP3.56□□□□□ -1.84
ATG3YNR007C BEM3P32873 1128 aa3.56□□□□□ -1.84
ATG3YNR007C SER1P33330 395 aaKnown RBP3.56□□□□□ -1.84
ATG3YNR007C TOM20P35180 183 aa3.56□□□□□ -1.84
ATG3YNR007C TDA3P38758 523 aa3.56□□□□□ -1.84
ATG3YNR007C MAM1P40065 302 aa3.56□□□□□ -1.84
ATG3YNR007C YJR096WP47137 282 aa3.56□□□□□ -1.84
ATG3YNR007C GPG1P53130 126 aa3.56□□□□□ -1.84
ATG3YNR007C COQ6P53318 479 aa3.56□□□□□ -1.84
ATG3YNR007C YPL068CQ02749 293 aa3.56□□□□□ -1.84
ATG3YNR007C MFM1Q02783 413 aa3.56□□□□□ -1.84
ATG3YNR007C EFR3Q03653 782 aaKnown RBP3.56□□□□□ -1.84
ATG3YNR007C HLR1Q04429 423 aa3.56□□□□□ -1.84
ATG3YNR007C STP4Q07351 490 aa3.56□□□□□ -1.84
ATG3YNR007C GEP3Q08622 556 aa3.56□□□□□ -1.84
ATG3YNR007C YTM1Q12024 460 aaPredicted RBP3.56□□□□□ -1.84
ATG3YNR007C RIM15P43565 1770 aa3.56□□□□□ -1.84
ATG3YNR007C AUS1Q08409 1394 aa3.55□□□□□ -1.84
ATG3YNR007C RPS17AP02407 136 aaKnown RBP3.55□□□□□ -1.84
ATG3YNR007C SUP35P05453 685 aaKnown RBP3.55□□□□□ -1.84
ATG3YNR007C HEM1P09950 548 aaPredicted RBP3.55□□□□□ -1.84
ATG3YNR007C RPS17BP14127 136 aaKnown RBP3.55□□□□□ -1.84
ATG3YNR007C TUP1P16649 713 aa3.55□□□□□ -1.84
ATG3YNR007C DID4P36108 232 aa3.55□□□□□ -1.84
ATG3YNR007C MRPL7P36519 292 aa3.55□□□□□ -1.84
ATG3YNR007C SHC1P39000 512 aa3.55□□□□□ -1.84
ATG3YNR007C GPP1P41277 250 aaKnown RBP3.55□□□□□ -1.84
ATG3YNR007C STB2P46679 850 aa3.55□□□□□ -1.84
ATG3YNR007C YGR054WP53235 642 aaKnown RBP3.55□□□□□ -1.84
ATG3YNR007C YNL018CP53976 612 aa3.55□□□□□ -1.84
ATG3YNR007C HIM1Q06674 414 aa3.55□□□□□ -1.84
ATG3YNR007C FRE7Q12333 620 aa3.55□□□□□ -1.84
ATG3YNR007C LYS2P07702 1392 aa3.54□□□□□ -1.84
ATG3YNR007C FMP27Q06179 2628 aa3.54□□□□□ -1.84
ATG3YNR007C WHI2P12611 486 aa3.54□□□□□ -1.84
ATG3YNR007C MRPL9P31334 269 aa3.54□□□□□ -1.84
ATG3YNR007C RPC34P32910 317 aa3.54□□□□□ -1.84
ATG3YNR007C APD1P38281 316 aa3.54□□□□□ -1.84
ATG3YNR007C CRG1P38892 291 aaRIP-Chip data3.54□□□□□ -1.84not detected
ATG3YNR007C FTR1P40088 404 aa3.54□□□□□ -1.84
ATG3YNR007C BUD27P43573 796 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
ATG3YNR007C DUG1P43616 481 aaKnown RBP3.54□□□□□ -1.84
ATG3YNR007C NMD5P46970 1048 aa3.54□□□□□ -1.84
ATG3YNR007C MNN11P46985 422 aaKnown RBP3.54□□□□□ -1.84
ATG3YNR007C YGR153WP48238 217 aa3.54□□□□□ -1.84
ATG3YNR007C TAF4P50105 388 aa3.54□□□□□ -1.84
ATG3YNR007C NOP15P53927 220 aaPredicted RBP3.54□□□□□ -1.84
ATG3YNR007C YNL050CP53952 270 aa3.54□□□□□ -1.84
ATG3YNR007C ERO1Q03103 563 aa3.54□□□□□ -1.84
ATG3YNR007C NSE5Q03718 556 aa3.54□□□□□ -1.84
ATG3YNR007C UBX2Q04228 584 aa3.54□□□□□ -1.84
ATG3YNR007C YPL216WQ08964 1102 aa3.54□□□□□ -1.84
ATG3YNR007C SSK22P25390 1331 aaPredicted RBP3.53□□□□□ -1.84
ATG3YNR007C MSM1P22438 575 aa3.53□□□□□ -1.84
ATG3YNR007C ECM32P32644 1121 aaKnown RBP3.53□□□□□ -1.84
ATG3YNR007C DHR2P36009 735 aaPredicted RBP3.53□□□□□ -1.84
ATG3YNR007C DUN1P39009 513 aa3.53□□□□□ -1.84
ATG3YNR007C OAF1P39720 1047 aaPredicted RBP3.53□□□□□ -1.84
ATG3YNR007C IES1P43579 692 aa3.53□□□□□ -1.84
ATG3YNR007C BUD17P53727 317 aa3.53□□□□□ -1.84
ATG3YNR007C ERG13P54839 491 aaKnown RBP3.53□□□□□ -1.84
ATG3YNR007C CRF1Q04930 467 aa3.53□□□□□ -1.84
ATG3YNR007C TRE2Q08693 809 aa3.53□□□□□ -1.84
ATG3YNR007C APM4Q99186 491 aa3.53□□□□□ -1.84
ATG3YNR007C AQY1P0CD91 305 aa3.52□□□□□ -1.85
ATG3YNR007C EUG1P32474 517 aa3.52□□□□□ -1.85
ATG3YNR007C CDS1P38221 457 aa3.52□□□□□ -1.85
ATG3YNR007C YBR071WP38243 211 aa3.52□□□□□ -1.85
ATG3YNR007C NOP2P40991 618 aaKnown RBP3.52□□□□□ -1.85
ATG3YNR007C SNO3P43544 222 aa3.52□□□□□ -1.85
ATG3YNR007C TIM50Q02776 476 aa3.52□□□□□ -1.85
ATG3YNR007C SYF1Q04048 859 aaPredicted RBP3.52□□□□□ -1.85
ATG3YNR007C TDA9Q04545 1251 aa3.52□□□□□ -1.85
ATG3YNR007C GFD1Q04839 188 aaKnown RBP3.52□□□□□ -1.85
ATG3YNR007C TGS1Q12052 315 aa3.52□□□□□ -1.85
ATG3YNR007C TMA17Q12513 150 aa3.52□□□□□ -1.85
ATG3YNR007C YIL177CP40434 1758 aa3.52□□□□□ -1.85
ATG3YNR007C YJL225CP40889 1758 aa3.52□□□□□ -1.85
ATG3YNR007C HOP1P20050 605 aa3.51□□□□□ -1.85
ATG3YNR007C AEP2P22136 580 aa3.51□□□□□ -1.85
ATG3YNR007C LOT5P34234 306 aa3.51□□□□□ -1.85
ATG3YNR007C EXO1P39875 702 aa3.51□□□□□ -1.85
ATG3YNR007C YEL025CP39991 1188 aa3.51□□□□□ -1.85
ATG3YNR007C YJL043WP47053 257 aa3.51□□□□□ -1.85
ATG3YNR007C PTA1Q01329 785 aaPredicted RBP3.51□□□□□ -1.85
ATG3YNR007C RPS15Q01855 142 aaKnown RBP3.51□□□□□ -1.85
ATG3YNR007C RIX7Q07844 837 aaKnown RBP3.51□□□□□ -1.85
ATG3YNR007C CTI6Q08923 506 aa3.51□□□□□ -1.85
ATG3YNR007C PSF3Q12146 194 aa3.51□□□□□ -1.85
ATG3YNR007C CAP1P28495 268 aaKnown RBP3.5□□□□□ -1.85
ATG3YNR007C SEC65P29478 273 aa3.5□□□□□ -1.85
ATG3YNR007C SMY1P32364 656 aaKnown RBP3.5□□□□□ -1.85
ATG3YNR007C RTR1P40084 226 aaPredicted RBP3.5□□□□□ -1.85
ATG3YNR007C PRM2P40534 656 aa3.5□□□□□ -1.85
ATG3YNR007C IRC8P47046 822 aa3.5□□□□□ -1.85
ATG3YNR007C YGL082WP53155 381 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms