RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A IRC5P43610 853 aa4.19□□□□□ -1.74
YSF3YNL138W-A YDL183CP48569 320 aa4.19□□□□□ -1.74
YSF3YNL138W-A SPC98P53540 846 aa4.19□□□□□ -1.74
YSF3YNL138W-A SNF12P53628 566 aa4.19□□□□□ -1.74
YSF3YNL138W-A FDC1Q03034 503 aa4.19□□□□□ -1.74
YSF3YNL138W-A CRF1Q04930 467 aa4.19□□□□□ -1.74
YSF3YNL138W-A ECM30Q06673 1274 aa4.19□□□□□ -1.74
YSF3YNL138W-A YCG1Q06680 1035 aa4.19□□□□□ -1.74
YSF3YNL138W-A MLP1Q02455 1875 aaKnown RBP4.18□□□□□ -1.74
YSF3YNL138W-A HIP1P06775 603 aa4.18□□□□□ -1.74
YSF3YNL138W-A HMG2P12684 1045 aa4.18□□□□□ -1.74
YSF3YNL138W-A GFA1P14742 717 aaKnown RBP4.18□□□□□ -1.74
YSF3YNL138W-A TOM20P35180 183 aa4.18□□□□□ -1.74
YSF3YNL138W-A APL3P38065 1025 aa4.18□□□□□ -1.74
YSF3YNL138W-A SRP68P38687 599 aaKnown RBP4.18□□□□□ -1.74
YSF3YNL138W-A YGR054WP53235 642 aaKnown RBP4.18□□□□□ -1.74
YSF3YNL138W-A YOR378WQ08902 515 aa4.18□□□□□ -1.74
YSF3YNL138W-A RRG1Q12167 365 aaPredicted RBP4.18□□□□□ -1.74
YSF3YNL138W-A KCC4P25389 1037 aa4.17□□□□□ -1.74
YSF3YNL138W-A PPE1P38796 400 aa4.17□□□□□ -1.74
YSF3YNL138W-A EMP65P40085 556 aa4.17□□□□□ -1.74
YSF3YNL138W-A MDG1P53885 366 aa4.17□□□□□ -1.74
YSF3YNL138W-A SYF1Q04048 859 aaPredicted RBP4.17□□□□□ -1.74
YSF3YNL138W-A UFO1Q04511 668 aa4.17□□□□□ -1.74
YSF3YNL138W-A PHM6Q05637 104 aa4.17□□□□□ -1.74
YSF3YNL138W-A PEX15Q08215 383 aa4.17□□□□□ -1.74
YSF3YNL138W-A BMS1Q08965 1183 aaKnown RBP4.17□□□□□ -1.74
YSF3YNL138W-A AIM41Q12032 185 aa4.17□□□□□ -1.74
YSF3YNL138W-A MRPL7P36519 292 aa4.16□□□□□ -1.74
YSF3YNL138W-A YMC2P38087 329 aa4.16□□□□□ -1.74
YSF3YNL138W-A MIT1P40002 666 aa4.16□□□□□ -1.74
YSF3YNL138W-A YNL034WP53963 612 aa4.16□□□□□ -1.74
YSF3YNL138W-A YNL018CP53976 612 aa4.16□□□□□ -1.74
YSF3YNL138W-A MTD1Q02046 320 aaKnown RBP4.16□□□□□ -1.74
YSF3YNL138W-A HLR1Q04429 423 aa4.16□□□□□ -1.74
YSF3YNL138W-A PMT6P42934 759 aa4.15□□□□□ -1.75
YSF3YNL138W-A PEX8P53248 589 aa4.15□□□□□ -1.75
YSF3YNL138W-A HOL1P53389 586 aa4.15□□□□□ -1.75
YSF3YNL138W-A TRS23Q03784 219 aa4.15□□□□□ -1.75
YSF3YNL138W-A SND1Q04007 877 aa4.15□□□□□ -1.75
YSF3YNL138W-A ALE1Q08548 619 aa4.15□□□□□ -1.75
YSF3YNL138W-A RTK1Q12100 620 aaPredicted RBP4.15□□□□□ -1.75
YSF3YNL138W-A TAD3Q9URQ3 322 aa4.15□□□□□ -1.75
YSF3YNL138W-A UBR2Q07963 1872 aa4.15□□□□□ -1.75
YSF3YNL138W-A PHO5P00635 467 aa4.14□□□□□ -1.75
YSF3YNL138W-A STE12P13574 688 aa4.14□□□□□ -1.75
YSF3YNL138W-A STE4P18851 423 aa4.14□□□□□ -1.75
YSF3YNL138W-A PPZ2P33329 710 aa4.14□□□□□ -1.75
YSF3YNL138W-A YEL025CP39991 1188 aa4.14□□□□□ -1.75
YSF3YNL138W-A YIL166CP40445 542 aa4.14□□□□□ -1.75
YSF3YNL138W-A YIL092WP40497 633 aa4.14□□□□□ -1.75
YSF3YNL138W-A YFL040WP43562 540 aa4.14□□□□□ -1.75
YSF3YNL138W-A MNT2P53059 558 aa4.14□□□□□ -1.75
YSF3YNL138W-A PEF1P53238 335 aa4.14□□□□□ -1.75
YSF3YNL138W-A TGL2P54857 326 aa4.14□□□□□ -1.75
YSF3YNL138W-A MFM1Q02783 413 aa4.14□□□□□ -1.75
YSF3YNL138W-A EFR3Q03653 782 aaKnown RBP4.14□□□□□ -1.75
YSF3YNL138W-A YDR179W-AQ03983 463 aa4.14□□□□□ -1.75
YSF3YNL138W-A ARR3Q06598 404 aa4.14□□□□□ -1.75
YSF3YNL138W-A HIM1Q06674 414 aa4.14□□□□□ -1.75
YSF3YNL138W-A SLX4Q12098 748 aa4.14□□□□□ -1.75
YSF3YNL138W-A MDM20Q12387 796 aaKnown RBP4.14□□□□□ -1.75
YSF3YNL138W-A VPS5Q92331 675 aa4.14□□□□□ -1.75
YSF3YNL138W-A MPD2Q99316 277 aa4.14□□□□□ -1.75
YSF3YNL138W-A IRA2P19158 3079 aa4.13□□□□□ -1.75
YSF3YNL138W-A PCK1P10963 549 aa4.13□□□□□ -1.75
YSF3YNL138W-A STL1P39932 569 aa4.13□□□□□ -1.75
YSF3YNL138W-A YEL020CP39994 560 aa4.13□□□□□ -1.75
YSF3YNL138W-A LRO1P40345 661 aa4.13□□□□□ -1.75
YSF3YNL138W-A GSM1P42950 618 aa4.13□□□□□ -1.75
YSF3YNL138W-A YIP4P53093 235 aa4.13□□□□□ -1.75
YSF3YNL138W-A MDR1P53258 950 aa4.13□□□□□ -1.75
YSF3YNL138W-A NGL2Q03264 515 aaKnown RBP4.13□□□□□ -1.75
YSF3YNL138W-A SPO11P23179 398 aa4.12□□□□□ -1.75
YSF3YNL138W-A CWH43P25618 953 aa4.12□□□□□ -1.75
YSF3YNL138W-A UIP5P36137 443 aa4.12□□□□□ -1.75
YSF3YNL138W-A ERG7P38604 731 aa4.12□□□□□ -1.75
YSF3YNL138W-A MUP3P38734 546 aa4.12□□□□□ -1.75
YSF3YNL138W-A PMC1P38929 1173 aaPredicted RBP4.12□□□□□ -1.75
YSF3YNL138W-A MAD2P40958 196 aa4.12□□□□□ -1.75
YSF3YNL138W-A ASN1P49089 572 aaKnown RBP4.12□□□□□ -1.75
YSF3YNL138W-A DAK1P54838 584 aaKnown RBP4.12□□□□□ -1.75
YSF3YNL138W-A DIN7Q12086 430 aa4.12□□□□□ -1.75
YSF3YNL138W-A URA3P03962 267 aa4.11□□□□□ -1.75
YSF3YNL138W-A PFK2P16862 959 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
YSF3YNL138W-A VPS33P20795 691 aa4.11□□□□□ -1.75
YSF3YNL138W-A ARG1P22768 420 aa4.11□□□□□ -1.75
YSF3YNL138W-A ADY2P25613 283 aa4.11□□□□□ -1.75
YSF3YNL138W-A DHR2P36009 735 aaPredicted RBP4.11□□□□□ -1.75
YSF3YNL138W-A GRX7P38068 203 aa4.11□□□□□ -1.75
YSF3YNL138W-A YJL193WP39542 402 aa4.11□□□□□ -1.75
YSF3YNL138W-A THI6P41835 540 aa4.11□□□□□ -1.75
YSF3YNL138W-A DSD1P53095 428 aa4.11□□□□□ -1.75
YSF3YNL138W-A BUD17P53727 317 aa4.11□□□□□ -1.75
YSF3YNL138W-A YNR071CP53757 342 aa4.11□□□□□ -1.75
YSF3YNL138W-A APM1Q00776 475 aaPredicted RBP4.11□□□□□ -1.75
YSF3YNL138W-A CEF1Q03654 590 aaPredicted RBP4.11□□□□□ -1.75
YSF3YNL138W-A NUR1Q12066 484 aa4.11□□□□□ -1.75
YSF3YNL138W-A TMA7Q3E764 64 aaKnown RBP4.11□□□□□ -1.75
YSF3YNL138W-A SSK22P25390 1331 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms