RNA–Protein interactions for RNA: YNL032W

SIW14, Transcript of Tyrosine phosphatase involved in actin organization and endocytosis, yeast

Gene SIW14, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIW14	YNL032W	GIS3	Q12418	502 aa		4.27	□□□□□ -1.73
SIW14	YNL032W	ILV2	P07342	687 aa	Known RBP	4.26	□□□□□ -1.73
SIW14	YNL032W	POL3	P15436	1097 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	MRPS28	P21771	286 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	PMI40	P29952	429 aa	Known RBP	4.26	□□□□□ -1.73
SIW14	YNL032W	ABD1	P32783	436 aa	Predicted RBP	4.26	□□□□□ -1.73
SIW14	YNL032W	COT1	P32798	439 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
SIW14	YNL032W	YKL107W	P34251	309 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	ATG19	P35193	415 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	MCD4	P36051	919 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	FZO1	P38297	855 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	POP4	P38336	279 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	PCA1	P38360	1216 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	CHS7	P38843	316 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	PIK1	P39104	1066 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	YGL176C	P46945	554 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	VPS4	P52917	437 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	TAF6	P53040	516 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	YNL247W	P53852	767 aa	Known RBP	4.26	□□□□□ -1.73
SIW14	YNL032W	YNL058C	P53947	316 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	PTA1	Q01329	785 aa	Predicted RBP	4.26	□□□□□ -1.73
SIW14	YNL032W	SHE9	Q04172	456 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	SXM1	Q04175	944 aa	Known RBP	4.26	□□□□□ -1.73
SIW14	YNL032W	YMR027W	Q04371	470 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	RXT3	Q07458	294 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	OPI10	Q08202	246 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	SMC5	Q08204	1093 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	RSB1	Q08417	382 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	VHS3	Q08438	674 aa		4.26	□□□□□ -1.73
SIW14	YNL032W	JIP3	O13555	125 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	GAL10	P04397	699 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	RAD3	P06839	778 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	RAD18	P10862	487 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	HEM15	P16622	393 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	COX11	P19516	300 aa	Known RBP	4.25	□□□□□ -1.73
SIW14	YNL032W	PRI2	P20457	528 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	ARG1	P22768	420 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	MUD1	P32605	298 aa	Known RBP	4.25	□□□□□ -1.73
SIW14	YNL032W	TFC3	P34111	1160 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
SIW14	YNL032W	HEL1	P36113	551 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	CCL1	P37366	393 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	VHC1	P38329	1120 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	HSM3	P38348	480 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	MSG5	P38590	489 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	FKS1	P38631	1876 aa	Known RBP	4.25	□□□□□ -1.73
SIW14	YNL032W	FTR1	P40088	404 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	YMR134W	P40207	237 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	RLP7	P40693	322 aa	Known RBP	4.25	□□□□□ -1.73
SIW14	YNL032W	SAE2	P46946	345 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	PHO86	P46956	311 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	TMA22	P47089	198 aa	Predicted RBP	4.25	□□□□□ -1.73
SIW14	YNL032W	BRO1	P48582	844 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	HOP2	P53187	214 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	SLT2	Q00772	484 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	PRP3	Q03338	469 aa	Predicted RBP	4.25	□□□□□ -1.73
SIW14	YNL032W	GTB1	Q04924	702 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	SPH1	Q06160	661 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	ISA1	Q07821	250 aa	Predicted RBP	4.25	□□□□□ -1.73
SIW14	YNL032W	SDH5	Q08230	162 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	YPL066W	Q12194	479 aa		4.25	□□□□□ -1.73
SIW14	YNL032W	RPL11A	P0C0W9	174 aa	Known RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	CMP2	P14747	604 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	KRS1	P15180	591 aa	Known RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	KAR3	P17119	729 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	SEC14	P24280	304 aa	Known RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	AGP1	P25376	633 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	KAR4	P25583	335 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	BUD14	P27637	709 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	ICL1	P28240	557 aa	Predicted RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	CAP1	P28495	268 aa	Known RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	SBA1	P28707	216 aa	Known RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	ZUO1	P32527	433 aa	Known RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	TOA1	P32773	286 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	TGL1	P34163	548 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	YEL1	P34225	687 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	CSG2	P35206	410 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	YMC2	P38087	329 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	LIN1	P38852	340 aa	Predicted RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	SPC97	P38863	823 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	MXR1	P40029	184 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	KAP123	P40069	1113 aa	Known RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	ARG2	P40360	574 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	YFL054C	P43549	646 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	LIA1	P47120	325 aa	Known RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	RCF2	P53721	224 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	ARK1	P53974	638 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	YDR222W	Q04925	415 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	IVY1	Q04934	453 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	TAF9	Q05027	157 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	SUE1	Q06524	206 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	GPB1	Q08886	897 aa		4.24	□□□□□ -1.73
SIW14	YNL032W	RPL11B	Q3E757	174 aa	Predicted RBP	4.24	□□□□□ -1.73
SIW14	YNL032W	EST1	P17214	699 aa	Predicted RBP	4.23	□□□□□ -1.73
SIW14	YNL032W	PRP4	P20053	465 aa	Known RBP	4.23	□□□□□ -1.73
SIW14	YNL032W	RPL5	P26321	297 aa	Known RBP	4.23	□□□□□ -1.73
SIW14	YNL032W	RME1	P32338	300 aa	Known RBP	4.23	□□□□□ -1.73
SIW14	YNL032W	MVD1	P32377	396 aa	Known RBP	4.23	□□□□□ -1.73
SIW14	YNL032W	DPH2	P32461	534 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms