RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C MTC7P32633 139 aa0.74□□□□□ -2.29
NIP1YMR309C YBR139WP38109 508 aa0.74□□□□□ -2.29
NIP1YMR309C FTH1P38310 465 aa0.74□□□□□ -2.29
NIP1YMR309C GND1P38720 489 aaKnown RBP0.74□□□□□ -2.29
NIP1YMR309C SAP1P39955 897 aaKnown RBP0.74□□□□□ -2.29
NIP1YMR309C YJR142WP47173 342 aa0.74□□□□□ -2.29
NIP1YMR309C VTC3Q02725 835 aa0.74□□□□□ -2.29
NIP1YMR309C UBP16Q02863 499 aa0.74□□□□□ -2.29
NIP1YMR309C SKY1Q03656 742 aa0.74□□□□□ -2.29
NIP1YMR309C SMA2Q04658 369 aa0.74□□□□□ -2.29
NIP1YMR309C DSE3Q08729 430 aa0.74□□□□□ -2.29
NIP1YMR309C MRN1Q08925 612 aaKnown RBP RIP-Chip data0.74□□□□□ -2.29not detected
NIP1YMR309C NOP56Q12460 504 aaKnown RBP RIP-Chip data0.74□□□□□ -2.29not detected
NIP1YMR309C YMR230W-AQ3E7B5 62 aa0.74□□□□□ -2.29
NIP1YMR309C PNO1Q99216 274 aaKnown RBP0.74□□□□□ -2.29
NIP1YMR309C RTC1Q08281 1341 aa0.74□□□□□ -2.29
NIP1YMR309C MAK32P23060 363 aa0.74□□□□□ -2.29
NIP1YMR309C CWH43P25618 953 aa0.74□□□□□ -2.29
NIP1YMR309C MSS51P32335 436 aa0.74□□□□□ -2.29
NIP1YMR309C PLC1P32383 869 aa0.74□□□□□ -2.29
NIP1YMR309C DAL3P32459 195 aa0.74□□□□□ -2.29
NIP1YMR309C CDC5P32562 705 aa0.74□□□□□ -2.29
NIP1YMR309C FMP46P36141 133 aaKnown RBP0.74□□□□□ -2.29
NIP1YMR309C SDH8P38345 138 aa0.74□□□□□ -2.29
NIP1YMR309C SRP68P38687 599 aaKnown RBP0.74□□□□□ -2.29
NIP1YMR309C STB5P38699 743 aa0.74□□□□□ -2.29
NIP1YMR309C FPR3P38911 411 aaKnown RBP0.74□□□□□ -2.29
NIP1YMR309C MAM1P40065 302 aa0.74□□□□□ -2.29
NIP1YMR309C GPP1P41277 250 aaKnown RBP0.74□□□□□ -2.29
NIP1YMR309C SAD1P43589 448 aa0.74□□□□□ -2.29
NIP1YMR309C YDL183CP48569 320 aa0.74□□□□□ -2.29
NIP1YMR309C PEF1P53238 335 aa0.74□□□□□ -2.29
NIP1YMR309C YNR029CP53729 429 aaKnown RBP0.74□□□□□ -2.29
NIP1YMR309C RAD33Q04231 177 aa0.74□□□□□ -2.29
NIP1YMR309C PLM2Q04383 521 aa0.74□□□□□ -2.29
NIP1YMR309C ECM22Q05958 814 aaPredicted RBP0.74□□□□□ -2.29
NIP1YMR309C MLH2Q07980 695 aa0.74□□□□□ -2.29
NIP1YMR309C TRE2Q08693 809 aa0.74□□□□□ -2.29
NIP1YMR309C YOR378WQ08902 515 aa0.74□□□□□ -2.29
NIP1YMR309C CWC2Q12046 339 aaPredicted RBP0.74□□□□□ -2.29
NIP1YMR309C YER175W-AQ8TGU4 54 aa0.74□□□□□ -2.29
NIP1YMR309C URA3P03962 267 aa0.73□□□□□ -2.29
NIP1YMR309C YFL068WP0CX99 160 aa0.73□□□□□ -2.29
NIP1YMR309C YLL066W-AP0CY00 160 aa0.73□□□□□ -2.29
NIP1YMR309C YLL067W-AP0CY01 160 aa0.73□□□□□ -2.29
NIP1YMR309C KAR1P11927 433 aa0.73□□□□□ -2.29
NIP1YMR309C ATP12P22135 325 aa0.73□□□□□ -2.29
NIP1YMR309C RRP43P25359 394 aaPredicted RBP0.73□□□□□ -2.29
NIP1YMR309C SWC3P31376 625 aa0.73□□□□□ -2.29
NIP1YMR309C HOS2P53096 452 aaPredicted RBP0.73□□□□□ -2.29
NIP1YMR309C SLD3P53135 668 aa0.73□□□□□ -2.29
NIP1YMR309C PFA4Q12006 378 aa0.73□□□□□ -2.29
NIP1YMR309C SEC18P18759 758 aaKnown RBP0.73□□□□□ -2.29
NIP1YMR309C COX11P19516 300 aaKnown RBP0.73□□□□□ -2.29
NIP1YMR309C ARG1P22768 420 aa0.73□□□□□ -2.29
NIP1YMR309C PET309P32522 965 aaPredicted RBP0.73□□□□□ -2.29
NIP1YMR309C SER1P33330 395 aaKnown RBP0.73□□□□□ -2.29
NIP1YMR309C IMD2P38697 523 aaKnown RBP0.73□□□□□ -2.29
NIP1YMR309C STL1P39932 569 aa0.73□□□□□ -2.29
NIP1YMR309C EAF5P39995 279 aa0.73□□□□□ -2.29
NIP1YMR309C VFA1P40080 203 aa0.73□□□□□ -2.29
NIP1YMR309C CIN1P40987 1014 aa0.73□□□□□ -2.29
NIP1YMR309C DUG1P43616 481 aaKnown RBP0.73□□□□□ -2.29
NIP1YMR309C YPT11P48559 417 aa0.73□□□□□ -2.29
NIP1YMR309C IMD3P50095 523 aaKnown RBP0.73□□□□□ -2.29
NIP1YMR309C ORC5P50874 479 aa0.73□□□□□ -2.29
NIP1YMR309C YNL034WP53963 612 aa0.73□□□□□ -2.29
NIP1YMR309C YML119WQ03208 357 aa0.73□□□□□ -2.29
NIP1YMR309C CRF1Q04930 467 aa0.73□□□□□ -2.29
NIP1YMR309C RRI1Q12468 440 aa0.73□□□□□ -2.29
NIP1YMR309C CHO2P05374 869 aaKnown RBP0.72□□□□□ -2.29
NIP1YMR309C PPZ1P26570 692 aa0.72□□□□□ -2.29
NIP1YMR309C RPS7AP26786 190 aaKnown RBP0.72□□□□□ -2.29
NIP1YMR309C NIC96P34077 839 aa0.72□□□□□ -2.29
NIP1YMR309C RPF2P36160 344 aaKnown RBP0.72□□□□□ -2.29
NIP1YMR309C FUN12P39730 1002 aaKnown RBP0.72□□□□□ -2.29
NIP1YMR309C SAW1P39735 261 aa0.72□□□□□ -2.29
NIP1YMR309C EMP65P40085 556 aa0.72□□□□□ -2.29
NIP1YMR309C VRG4P40107 337 aa0.72□□□□□ -2.29
NIP1YMR309C YIL169CP40442 995 aa0.72□□□□□ -2.29
NIP1YMR309C IRC5P43610 853 aa0.72□□□□□ -2.29
NIP1YMR309C UBX6P47049 396 aa0.72□□□□□ -2.29
NIP1YMR309C VPS25P47142 202 aa0.72□□□□□ -2.29
NIP1YMR309C MNT2P53059 558 aa0.72□□□□□ -2.29
NIP1YMR309C GPG1P53130 126 aa0.72□□□□□ -2.29
NIP1YMR309C YMR034CQ05131 434 aaPredicted RBP0.72□□□□□ -2.29
NIP1YMR309C YLR281CQ05863 155 aa0.72□□□□□ -2.29
NIP1YMR309C PSF3Q12146 194 aa0.72□□□□□ -2.29
NIP1YMR309C GET3Q12154 354 aaKnown RBP0.72□□□□□ -2.29
NIP1YMR309C TIP41Q12199 356 aa0.72□□□□□ -2.29
NIP1YMR309C GAL4P04386 881 aa0.72□□□□□ -2.29
NIP1YMR309C AMD2P22580 549 aa0.72□□□□□ -2.29
NIP1YMR309C SDS22P36047 338 aa0.72□□□□□ -2.29
NIP1YMR309C TAF5P38129 798 aa0.72□□□□□ -2.29
NIP1YMR309C ARO9P38840 513 aaPredicted RBP0.72□□□□□ -2.29
NIP1YMR309C SSP120P39931 234 aaKnown RBP0.72□□□□□ -2.29
NIP1YMR309C GPP2P40106 250 aaKnown RBP0.72□□□□□ -2.29
NIP1YMR309C GSM1P42950 618 aa0.72□□□□□ -2.29
NIP1YMR309C COS12P53053 380 aa0.72□□□□□ -2.29
NIP1YMR309C YNL092WP53934 400 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms