RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W YPL071CQ02864 156 aa3.23□□□□□ -1.89
DDR48YMR173W SLX4Q12098 748 aa3.23□□□□□ -1.89
DDR48YMR173W HOS1Q12214 470 aa3.23□□□□□ -1.89
DDR48YMR173W PNO1Q99216 274 aaKnown RBP3.23□□□□□ -1.89
DDR48YMR173W AMD2P22580 549 aa3.22□□□□□ -1.89
DDR48YMR173W YCR061WP25639 631 aa3.22□□□□□ -1.89
DDR48YMR173W PAF1P38351 445 aa3.22□□□□□ -1.89
DDR48YMR173W YIL024CP40543 189 aa3.22□□□□□ -1.89
DDR48YMR173W COG2P53271 262 aa3.22□□□□□ -1.89
DDR48YMR173W VTC3Q02725 835 aa3.22□□□□□ -1.89
DDR48YMR173W MRPL1Q04599 285 aa3.22□□□□□ -1.89
DDR48YMR173W RAD34Q06665 692 aa3.22□□□□□ -1.89
DDR48YMR173W LYS21Q12122 440 aaKnown RBP3.22□□□□□ -1.89
DDR48YMR173W PSF3Q12146 194 aa3.22□□□□□ -1.89
DDR48YMR173W RRP43P25359 394 aaPredicted RBP3.21□□□□□ -1.9
DDR48YMR173W COQ3P27680 312 aa3.21□□□□□ -1.9
DDR48YMR173W MGM1P32266 881 aa3.21□□□□□ -1.9
DDR48YMR173W YLF2P38746 405 aa3.21□□□□□ -1.9
DDR48YMR173W TOM71P38825 639 aaKnown RBP3.21□□□□□ -1.9
DDR48YMR173W YMR124WP39523 943 aaKnown RBP3.21□□□□□ -1.9
DDR48YMR173W AIM17P23180 465 aaKnown RBP3.2□□□□□ -1.9
DDR48YMR173W YCP4P25349 247 aaKnown RBP3.2□□□□□ -1.9
DDR48YMR173W GRX4P32642 244 aa3.2□□□□□ -1.9
DDR48YMR173W IMD2P38697 523 aaKnown RBP3.2□□□□□ -1.9
DDR48YMR173W YAT2P40017 923 aa3.2□□□□□ -1.9
DDR48YMR173W CIN1P40987 1014 aa3.2□□□□□ -1.9
DDR48YMR173W IDS2P46958 469 aa3.2□□□□□ -1.9
DDR48YMR173W IMD3P50095 523 aaKnown RBP3.2□□□□□ -1.9
DDR48YMR173W COG6P53959 839 aa3.2□□□□□ -1.9
DDR48YMR173W YML119WQ03208 357 aa3.2□□□□□ -1.9
DDR48YMR173W GET3Q12154 354 aaKnown RBP3.2□□□□□ -1.9
DDR48YMR173W HER1Q12276 1246 aa3.2□□□□□ -1.9
DDR48YMR173W YOR111WQ99210 232 aa3.2□□□□□ -1.9
DDR48YMR173W YEN1P40028 759 aa3.19□□□□□ -1.9
DDR48YMR173W RPL15BP54780 204 aaPredicted RBP3.19□□□□□ -1.9
DDR48YMR173W TRS31Q03337 283 aa3.19□□□□□ -1.9
DDR48YMR173W ARA2Q04212 335 aa3.19□□□□□ -1.9
DDR48YMR173W PLM2Q04383 521 aa3.19□□□□□ -1.9
DDR48YMR173W ECM38Q05902 660 aaPredicted RBP3.19□□□□□ -1.9
DDR48YMR173W YDL242WQ07746 117 aa3.19□□□□□ -1.9
DDR48YMR173W YPL191CQ08930 360 aa3.19□□□□□ -1.9
DDR48YMR173W DBP10Q12389 995 aaKnown RBP3.19□□□□□ -1.9
DDR48YMR173W SES1P07284 462 aaKnown RBP3.18□□□□□ -1.9
DDR48YMR173W ILS1P09436 1072 aaKnown RBP3.18□□□□□ -1.9
DDR48YMR173W TAF5P38129 798 aa3.18□□□□□ -1.9
DDR48YMR173W ENP1P38333 483 aaKnown RBP3.18□□□□□ -1.9
DDR48YMR173W SAP1P39955 897 aaKnown RBP3.18□□□□□ -1.9
DDR48YMR173W UBP16Q02863 499 aa3.18□□□□□ -1.9
DDR48YMR173W SNU56Q03782 492 aaKnown RBP3.18□□□□□ -1.9
DDR48YMR173W NDD1Q08887 554 aa3.18□□□□□ -1.9
DDR48YMR173W TMA17Q12513 150 aa3.18□□□□□ -1.9
DDR48YMR173W KAR1P11927 433 aa3.17□□□□□ -1.9
DDR48YMR173W ATO2P32907 282 aa3.17□□□□□ -1.9
DDR48YMR173W TGL1P34163 548 aa3.17□□□□□ -1.9
DDR48YMR173W STB5P38699 743 aa3.17□□□□□ -1.9
DDR48YMR173W ARO9P38840 513 aaPredicted RBP3.17□□□□□ -1.9
DDR48YMR173W MTG2P38860 518 aa3.17□□□□□ -1.9
DDR48YMR173W VFA1P40080 203 aa3.17□□□□□ -1.9
DDR48YMR173W POL31P46957 487 aa3.17□□□□□ -1.9
DDR48YMR173W CNM67P53865 581 aaKnown RBP3.17□□□□□ -1.9
DDR48YMR173W YAT1P80235 687 aa3.17□□□□□ -1.9
DDR48YMR173W PHM6Q05637 104 aa3.17□□□□□ -1.9
DDR48YMR173W CRD1Q07560 283 aa3.17□□□□□ -1.9
DDR48YMR173W BUD7Q08754 746 aa3.17□□□□□ -1.9
DDR48YMR173W ATX2Q12067 313 aa3.17□□□□□ -1.9
DDR48YMR173W YBR255C-AQ3E776 120 aa3.17□□□□□ -1.9
DDR48YMR173W YER175W-AQ8TGU4 54 aa3.17□□□□□ -1.9
DDR48YMR173W AIM44Q99299 758 aa3.17□□□□□ -1.9
DDR48YMR173W RTC1Q08281 1341 aa3.17□□□□□ -1.9
DDR48YMR173W MRC1P25588 1096 aa3.16□□□□□ -1.9
DDR48YMR173W VBA2P38358 474 aaKnown RBP3.16□□□□□ -1.9
DDR48YMR173W SRL1Q08673 210 aa3.16□□□□□ -1.9
DDR48YMR173W GAL4P04386 881 aa3.15□□□□□ -1.91
DDR48YMR173W VAS1P07806 1104 aaKnown RBP3.15□□□□□ -1.91
DDR48YMR173W PHO3P24031 467 aa3.15□□□□□ -1.91
DDR48YMR173W PRE2P30656 287 aaKnown RBP3.15□□□□□ -1.91
DDR48YMR173W SDS22P36047 338 aa3.15□□□□□ -1.91
DDR48YMR173W LNP1P38878 278 aa3.15□□□□□ -1.91
DDR48YMR173W ERV46P39727 415 aa3.15□□□□□ -1.91
DDR48YMR173W MDV1P47025 714 aa3.15□□□□□ -1.91
DDR48YMR173W UBX3Q12229 455 aa3.15□□□□□ -1.91
DDR48YMR173W RPT3P33298 428 aaKnown RBP3.14□□□□□ -1.91
DDR48YMR173W RPF2P36160 344 aaKnown RBP3.14□□□□□ -1.91
DDR48YMR173W ERC1P38767 581 aa3.14□□□□□ -1.91
DDR48YMR173W FLO5P38894 1075 aa3.14□□□□□ -1.91
DDR48YMR173W ARB1P40024 610 aaKnown RBP3.14□□□□□ -1.91
DDR48YMR173W TPA1P40032 644 aaKnown RBP3.14□□□□□ -1.91
DDR48YMR173W SCS2P40075 244 aaKnown RBP3.14□□□□□ -1.91
DDR48YMR173W YIL152WP40455 235 aa3.14□□□□□ -1.91
DDR48YMR173W YJL107CP42947 387 aa3.14□□□□□ -1.91
DDR48YMR173W YJR120WP47157 116 aa3.14□□□□□ -1.91
DDR48YMR173W LYS20P48570 428 aaKnown RBP3.14□□□□□ -1.91
DDR48YMR173W YRB30P53107 440 aaPredicted RBP3.14□□□□□ -1.91
DDR48YMR173W AAT1Q01802 451 aa3.14□□□□□ -1.91
DDR48YMR173W SCW10Q04951 389 aa3.14□□□□□ -1.91
DDR48YMR173W YML053CQ04978 212 aa3.14□□□□□ -1.91
DDR48YMR173W YTH1Q06102 208 aaPredicted RBP3.14□□□□□ -1.91
DDR48YMR173W AIM6Q07716 390 aa3.14□□□□□ -1.91
DDR48YMR173W AAD4Q07747 329 aa3.14□□□□□ -1.91
DDR48YMR173W CTT1P06115 562 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms