RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	AIM14	P53109	570 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	IZH1	Q03419	316 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	NSE3	Q05541	303 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	POS5	Q06892	414 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	TUF1	P02992	437 aa	Known RBP	0.71	□□□□□ -2.3
RCO1	YMR075W	MEF1	P25039	761 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	YEL045C	P32616	141 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	DIN7	Q12086	430 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	HMG1	P12683	1054 aa		0.7	□□□□□ -2.3
RCO1	YMR075W	STI1	P15705	589 aa	Known RBP RIP-Chip data	0.7	□□□□□ -2.3	not detected
RCO1	YMR075W	IMG2	P25642	146 aa	Predicted RBP	0.7	□□□□□ -2.3
RCO1	YMR075W	THI4	P32318	326 aa		0.7	□□□□□ -2.3
RCO1	YMR075W	HOG1	P32485	435 aa		0.7	□□□□□ -2.3
RCO1	YMR075W	RIM2	P38127	377 aa		0.7	□□□□□ -2.3
RCO1	YMR075W	MDM31	P38880	579 aa		0.7	□□□□□ -2.3
RCO1	YMR075W	NUP82	P40368	713 aa		0.7	□□□□□ -2.3
RCO1	YMR075W	YJL049W	P47048	450 aa		0.7	□□□□□ -2.3
RCO1	YMR075W	RAD33	Q04231	177 aa		0.7	□□□□□ -2.3
RCO1	YMR075W	APL5	Q08951	932 aa	Known RBP	0.7	□□□□□ -2.3
RCO1	YMR075W	GUK1	P15454	187 aa	Known RBP	0.69	□□□□□ -2.3
RCO1	YMR075W	MNN4	P36044	1178 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	MAM1	P40065	302 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	NNF1	P47149	201 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	YNL181W	P53878	407 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	YOL098C	Q12496	1037 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	PHO8	P11491	566 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	GLN4	P13188	809 aa	Known RBP	0.69	□□□□□ -2.3
RCO1	YMR075W	MIH1	P23748	554 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	PLC1	P32383	869 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	PPG1	P32838	368 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	YJL193W	P39542	402 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	ASG1	P40467	964 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	MAL11	P53048	616 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	SDT1	P53078	280 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	TIM50	Q02776	476 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	NSE5	Q03718	556 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	ARA2	Q04212	335 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	YPS7	Q06325	596 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	YLR125W	Q12138	136 aa		0.69	□□□□□ -2.3
RCO1	YMR075W	SOD1	P00445	154 aa	Known RBP	0.68	□□□□□ -2.3
RCO1	YMR075W	YHR033W	P38690	423 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	NUG1	P40010	520 aa	Known RBP	0.68	□□□□□ -2.3
RCO1	YMR075W	CHZ1	P40019	153 aa	Predicted RBP	0.68	□□□□□ -2.3
RCO1	YMR075W	FTR1	P40088	404 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	LRO1	P40345	661 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	BUD8	P41698	603 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	ORC1	P54784	914 aa	Predicted RBP	0.68	□□□□□ -2.3
RCO1	YMR075W	ARP9	Q05123	467 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	ATG33	Q06485	197 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	GUD1	Q07729	489 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	SEC12	P11655	471 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	SFL1	P20134	766 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	GDA1	P32621	518 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	EFM2	P38347	419 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	TDA3	P38758	523 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	BEM4	P39011	633 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	TFB2	Q02939	513 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	NTG2	Q08214	380 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	GIN4	Q12263	1142 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	MDM12	Q92328	271 aa		0.68	□□□□□ -2.3
RCO1	YMR075W	RTC1	Q08281	1341 aa		0.67	□□□□□ -2.3
RCO1	YMR075W	YKU70	P32807	602 aa		0.67	□□□□□ -2.3
RCO1	YMR075W	CRG1	P38892	291 aa	RIP-Chip data	0.67	□□□□□ -2.3	not detected
RCO1	YMR075W	IML2	P47031	731 aa		0.67	□□□□□ -2.3
RCO1	YMR075W	TAF4	P50105	388 aa		0.67	□□□□□ -2.3
RCO1	YMR075W	SDA1	P53313	767 aa	Known RBP	0.67	□□□□□ -2.3
RCO1	YMR075W	RCR2	Q03446	210 aa	Known RBP	0.67	□□□□□ -2.3
RCO1	YMR075W	YDR415C	Q04033	374 aa	Predicted RBP	0.67	□□□□□ -2.3
RCO1	YMR075W	PLM2	Q04383	521 aa		0.67	□□□□□ -2.3
RCO1	YMR075W	YLR407W	Q06070	228 aa		0.67	□□□□□ -2.3
RCO1	YMR075W	DCS2	Q12123	353 aa		0.67	□□□□□ -2.3
RCO1	YMR075W	CHO2	P05374	869 aa	Known RBP	0.66	□□□□□ -2.3
RCO1	YMR075W	PCL2	P25693	308 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	MSH2	P25847	964 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	PRE4	P30657	266 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	SFP1	P32432	683 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	TPA1	P40032	644 aa	Known RBP	0.66	□□□□□ -2.3
RCO1	YMR075W	RTS2	P40962	232 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	YGR153W	P48238	217 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	RPN4	Q03465	531 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	SWF1	Q04629	336 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	POB3	Q04636	552 aa	Known RBP	0.66	□□□□□ -2.3
RCO1	YMR075W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	0.66	□□□□□ -2.3	not detected
RCO1	YMR075W	RPS17A	P02407	136 aa	Known RBP	0.66	□□□□□ -2.3
RCO1	YMR075W	ILV2	P07342	687 aa	Known RBP	0.66	□□□□□ -2.3
RCO1	YMR075W	RPS17B	P14127	136 aa	Known RBP	0.66	□□□□□ -2.3
RCO1	YMR075W	VPS33	P20795	691 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	CBP3	P21560	335 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	PRP19	P32523	503 aa	Known RBP	0.66	□□□□□ -2.3
RCO1	YMR075W	EHT1	P38295	451 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	PCM1	P38628	557 aa	Known RBP	0.66	□□□□□ -2.3
RCO1	YMR075W	GSM1	P42950	618 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	MET13	P53128	600 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	ESBP6	P53918	673 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	YHM2	Q04013	314 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	PDR8	Q06149	701 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	RAD34	Q06665	692 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	YLR112W	Q12130	139 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	NUP145	P49687	1317 aa		0.66	□□□□□ -2.3
RCO1	YMR075W	BAR1	P12630	587 aa		0.65	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 78.4 ms