RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeast

Gene VPS71, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS71	YML041C	ESL2	P36168	1195 aa		4.92	□□□□□ -1.62
VPS71	YML041C	SDH8	P38345	138 aa		4.92	□□□□□ -1.62
VPS71	YML041C	IDS2	P46958	469 aa		4.92	□□□□□ -1.62
VPS71	YML041C	RIA1	P53893	1110 aa		4.92	□□□□□ -1.62
VPS71	YML041C	YNL092W	P53934	400 aa		4.92	□□□□□ -1.62
VPS71	YML041C	YPL108W	Q02872	168 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS71	YML041C	USV1	Q12132	391 aa		4.92	□□□□□ -1.62
VPS71	YML041C	RVB2	Q12464	471 aa	Known RBP	4.92	□□□□□ -1.62
VPS71	YML041C	CTT1	P06115	562 aa		4.91	□□□□□ -1.62
VPS71	YML041C	RPB2	P08518	1224 aa	Known RBP	4.91	□□□□□ -1.62
VPS71	YML041C	CDC16	P09798	840 aa		4.91	□□□□□ -1.62
VPS71	YML041C	AAC3	P18238	307 aa		4.91	□□□□□ -1.62
VPS71	YML041C	NFU1	P32860	256 aa		4.91	□□□□□ -1.62
VPS71	YML041C	BLI1	P35727	113 aa		4.91	□□□□□ -1.62
VPS71	YML041C	TEF4	P36008	412 aa	Known RBP	4.91	□□□□□ -1.62
VPS71	YML041C	PSD1	P39006	500 aa		4.91	□□□□□ -1.62
VPS71	YML041C	SMX3	P54999	86 aa	Predicted RBP	4.91	□□□□□ -1.62
VPS71	YML041C	KIN4	Q01919	800 aa		4.91	□□□□□ -1.62
VPS71	YML041C	BMS1	Q08965	1183 aa	Known RBP	4.91	□□□□□ -1.62
VPS71	YML041C	YBR255C-A	Q3E776	120 aa		4.91	□□□□□ -1.62
VPS71	YML041C	TY2A-LR1	P0C2J4	438 aa		4.9	□□□□□ -1.63
VPS71	YML041C	TY2A-F	P0CX61	438 aa		4.9	□□□□□ -1.63
VPS71	YML041C	TY2A-GR2	P0CX62	438 aa		4.9	□□□□□ -1.63
VPS71	YML041C	RPL19A	P0CX82	189 aa	Known RBP	4.9	□□□□□ -1.63
VPS71	YML041C	RPL19B	P0CX83	189 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS71	YML041C	ABF1	P14164	731 aa		4.9	□□□□□ -1.63
VPS71	YML041C	TY2A-C	P25383	438 aa		4.9	□□□□□ -1.63
VPS71	YML041C	CCL1	P37366	393 aa		4.9	□□□□□ -1.63
VPS71	YML041C	SUL1	P38359	859 aa		4.9	□□□□□ -1.63
VPS71	YML041C	KSP1	P38691	1029 aa	Known RBP	4.9	□□□□□ -1.63
VPS71	YML041C	DIP5	P53388	608 aa		4.9	□□□□□ -1.63
VPS71	YML041C	YNR061C	P53747	219 aa		4.9	□□□□□ -1.63
VPS71	YML041C	TY2A-DR2	Q03483	438 aa		4.9	□□□□□ -1.63
VPS71	YML041C	UFO1	Q04511	668 aa		4.9	□□□□□ -1.63
VPS71	YML041C	RCO1	Q04779	684 aa		4.9	□□□□□ -1.63
VPS71	YML041C	TY2A-B	Q12260	438 aa		4.9	□□□□□ -1.63
VPS71	YML041C	TY2A-OR2	Q12293	438 aa		4.9	□□□□□ -1.63
VPS71	YML041C	TY2A-DR1	Q12392	438 aa		4.9	□□□□□ -1.63
VPS71	YML041C	TY2A-OR1	Q12439	438 aa		4.9	□□□□□ -1.63
VPS71	YML041C	TY2A-DR3	Q99303	438 aa		4.9	□□□□□ -1.63
VPS71	YML041C	TPK1	P06244	397 aa		4.89	□□□□□ -1.63
VPS71	YML041C	YML003W	P0CF16	290 aa		4.89	□□□□□ -1.63
VPS71	YML041C	KGD2	P19262	463 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS71	YML041C	TFC3	P34111	1160 aa		4.89	□□□□□ -1.63
VPS71	YML041C	YEL068C	P39977	110 aa		4.89	□□□□□ -1.63
VPS71	YML041C	VTC2	P43585	828 aa		4.89	□□□□□ -1.63
VPS71	YML041C	SGM1	P47166	707 aa		4.89	□□□□□ -1.63
VPS71	YML041C	VPS4	P52917	437 aa		4.89	□□□□□ -1.63
VPS71	YML041C	COG1	P53079	417 aa		4.89	□□□□□ -1.63
VPS71	YML041C	NMA2	P53204	395 aa		4.89	□□□□□ -1.63
VPS71	YML041C	SPC98	P53540	846 aa		4.89	□□□□□ -1.63
VPS71	YML041C	BUD17	P53727	317 aa		4.89	□□□□□ -1.63
VPS71	YML041C	DAK1	P54838	584 aa	Known RBP	4.89	□□□□□ -1.63
VPS71	YML041C	SSL2	Q00578	843 aa		4.89	□□□□□ -1.63
VPS71	YML041C	GTB1	Q04924	702 aa		4.89	□□□□□ -1.63
VPS71	YML041C	PRS5	Q12265	496 aa	Known RBP	4.89	□□□□□ -1.63
VPS71	YML041C	Q0010	Q9ZZX9	128 aa		4.89	□□□□□ -1.63
VPS71	YML041C	MET8	P15807	274 aa		4.88	□□□□□ -1.63
VPS71	YML041C	CMK1	P27466	446 aa	Known RBP	4.88	□□□□□ -1.63
VPS71	YML041C	MRP20	P32387	263 aa		4.88	□□□□□ -1.63
VPS71	YML041C	APL3	P38065	1025 aa		4.88	□□□□□ -1.63
VPS71	YML041C	ARO9	P38840	513 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS71	YML041C	NDC80	P40460	691 aa		4.88	□□□□□ -1.63
VPS71	YML041C	YIP4	P53093	235 aa		4.88	□□□□□ -1.63
VPS71	YML041C	IMO32	P53219	342 aa		4.88	□□□□□ -1.63
VPS71	YML041C	CRF1	Q04930	467 aa		4.88	□□□□□ -1.63
VPS71	YML041C	ESC8	Q08119	714 aa		4.88	□□□□□ -1.63
VPS71	YML041C	NBP2	Q12163	236 aa		4.88	□□□□□ -1.63
VPS71	YML041C	SCM3	Q12334	223 aa		4.88	□□□□□ -1.63
VPS71	YML041C	OLE1	P21147	510 aa	Known RBP	4.87	□□□□□ -1.63
VPS71	YML041C	CNS1	P33313	385 aa		4.87	□□□□□ -1.63
VPS71	YML041C	TRM2	P33753	639 aa		4.87	□□□□□ -1.63
VPS71	YML041C	NOP4	P37838	685 aa	Known RBP	4.87	□□□□□ -1.63
VPS71	YML041C	CHS7	P38843	316 aa		4.87	□□□□□ -1.63
VPS71	YML041C	YJL206C	P39529	758 aa		4.87	□□□□□ -1.63
VPS71	YML041C	ARG2	P40360	574 aa		4.87	□□□□□ -1.63
VPS71	YML041C	IST3	P40565	148 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS71	YML041C	CCT7	P42943	550 aa	Known RBP	4.87	□□□□□ -1.63
VPS71	YML041C	ARC1	P46672	376 aa	Known RBP	4.87	□□□□□ -1.63
VPS71	YML041C	ZAP1	P47043	880 aa		4.87	□□□□□ -1.63
VPS71	YML041C	MFM1	Q02783	413 aa		4.87	□□□□□ -1.63
VPS71	YML041C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
VPS71	YML041C	VCX1	Q99385	411 aa		4.87	□□□□□ -1.63
VPS71	YML041C	ATP2	P00830	511 aa	Known RBP	4.86	□□□□□ -1.63
VPS71	YML041C	AAC1	P04710	309 aa		4.86	□□□□□ -1.63
VPS71	YML041C	ERG8	P24521	451 aa		4.86	□□□□□ -1.63
VPS71	YML041C	SWC3	P31376	625 aa		4.86	□□□□□ -1.63
VPS71	YML041C	RKM3	P38222	552 aa		4.86	□□□□□ -1.63
VPS71	YML041C	TDP1	P38319	544 aa		4.86	□□□□□ -1.63
VPS71	YML041C	YHL017W	P38745	532 aa		4.86	□□□□□ -1.63
VPS71	YML041C	MIT1	P40002	666 aa		4.86	□□□□□ -1.63
VPS71	YML041C	YJR061W	P40355	935 aa		4.86	□□□□□ -1.63
VPS71	YML041C	THI6	P41835	540 aa		4.86	□□□□□ -1.63
VPS71	YML041C	PIL1	P53252	339 aa	Known RBP	4.86	□□□□□ -1.63
VPS71	YML041C	RBG2	P53295	368 aa	Known RBP	4.86	□□□□□ -1.63
VPS71	YML041C	SUN4	P53616	420 aa		4.86	□□□□□ -1.63
VPS71	YML041C	MTG1	Q03151	367 aa	Predicted RBP	4.86	□□□□□ -1.63
VPS71	YML041C	FCP1	Q03254	732 aa		4.86	□□□□□ -1.63
VPS71	YML041C	MRI1	Q06489	411 aa	Known RBP	4.86	□□□□□ -1.63
VPS71	YML041C	VIP1	Q06685	1146 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms