RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeast

Gene NIT3, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	YLR351C	LNP1	P38878	278 aa		4.91	□□□□□ -1.62
NIT3	YLR351C	ESF2	P53743	316 aa	Known RBP	4.91	□□□□□ -1.62
NIT3	YLR351C	ARG7	Q04728	441 aa		4.91	□□□□□ -1.62
NIT3	YLR351C	CRF1	Q04930	467 aa		4.91	□□□□□ -1.62
NIT3	YLR351C	ADE5,7	P07244	802 aa	Known RBP	4.9	□□□□□ -1.63
NIT3	YLR351C	PMA2	P19657	947 aa		4.9	□□□□□ -1.63
NIT3	YLR351C	SWI4	P25302	1093 aa	Known RBP	4.9	□□□□□ -1.63
NIT3	YLR351C	ILV6	P25605	309 aa	Known RBP	4.9	□□□□□ -1.63
NIT3	YLR351C	ADY2	P25613	283 aa		4.9	□□□□□ -1.63
NIT3	YLR351C	SWC3	P31376	625 aa		4.9	□□□□□ -1.63
NIT3	YLR351C	FSH1	P38777	243 aa	Known RBP	4.9	□□□□□ -1.63
NIT3	YLR351C	MAM1	P40065	302 aa		4.9	□□□□□ -1.63
NIT3	YLR351C	RAD26	P40352	1085 aa		4.9	□□□□□ -1.63
NIT3	YLR351C	LAS21	P40367	830 aa		4.9	□□□□□ -1.63
NIT3	YLR351C	MRPL13	Q02204	264 aa		4.9	□□□□□ -1.63
NIT3	YLR351C	ULA1	Q12059	462 aa		4.9	□□□□□ -1.63
NIT3	YLR351C	ESP1	Q03018	1630 aa		4.9	□□□□□ -1.63
NIT3	YLR351C	TAF2	P23255	1407 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	YMR084W	A2P2R3	262 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	RPL7A	P05737	244 aa	Known RBP	4.89	□□□□□ -1.63
NIT3	YLR351C	NUC1	P08466	329 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	YCL049C	P25577	312 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	YMC1	P32331	307 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	ARP2	P32381	391 aa	Known RBP	4.89	□□□□□ -1.63
NIT3	YLR351C	MRPL36	P36531	177 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	NPR3	P38742	1146 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	OPT1	P40897	799 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	WAR1	Q03631	944 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	SLK19	Q08581	821 aa	Known RBP	4.89	□□□□□ -1.63
NIT3	YLR351C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
NIT3	YLR351C	RPL7B	Q12213	244 aa	Known RBP	4.89	□□□□□ -1.63
NIT3	YLR351C	YER175W-A	Q8TGU4	54 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	SSK2	P53599	1579 aa		4.89	□□□□□ -1.63
NIT3	YLR351C	LEU2	P04173	364 aa	Predicted RBP	4.88	□□□□□ -1.63
NIT3	YLR351C	NCP1	P16603	691 aa	Known RBP	4.88	□□□□□ -1.63
NIT3	YLR351C	KGD2	P19262	463 aa	Predicted RBP	4.88	□□□□□ -1.63
NIT3	YLR351C	AAD3	P25612	363 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	XRS2	P33301	854 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	PPZ2	P33329	710 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	YBR138C	P38277	524 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	MTG2	P38860	518 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	PSF2	P40359	213 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	ERR3	P42222	437 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	BST1	P43571	1029 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	ARC35	P53731	342 aa	Known RBP	4.88	□□□□□ -1.63
NIT3	YLR351C	YNL092W	P53934	400 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	TRS130	Q03660	1102 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	YBR255C-A	Q3E776	120 aa		4.88	□□□□□ -1.63
NIT3	YLR351C	SKI3	P17883	1432 aa	Known RBP	4.88	□□□□□ -1.63
NIT3	YLR351C	TOP1	P04786	769 aa		4.87	□□□□□ -1.63
NIT3	YLR351C	CHO2	P05374	869 aa	Known RBP	4.87	□□□□□ -1.63
NIT3	YLR351C	PET122	P10355	254 aa		4.87	□□□□□ -1.63
NIT3	YLR351C	MTF2	P10849	440 aa		4.87	□□□□□ -1.63
NIT3	YLR351C	PDE1	P22434	369 aa		4.87	□□□□□ -1.63
NIT3	YLR351C	ARO9	P38840	513 aa	Predicted RBP	4.87	□□□□□ -1.63
NIT3	YLR351C	SMK1	P41808	388 aa		4.87	□□□□□ -1.63
NIT3	YLR351C	YFL015C	P43578	164 aa		4.87	□□□□□ -1.63
NIT3	YLR351C	ARO10	Q06408	635 aa		4.87	□□□□□ -1.63
NIT3	YLR351C	SUL2	Q12325	893 aa		4.87	□□□□□ -1.63
NIT3	YLR351C	TUB1	P09733	447 aa	Known RBP	4.86	□□□□□ -1.63
NIT3	YLR351C	AMD2	P22580	549 aa		4.86	□□□□□ -1.63
NIT3	YLR351C	GCD7	P32502	381 aa	Predicted RBP	4.86	□□□□□ -1.63
NIT3	YLR351C	SKP2	P42843	763 aa		4.86	□□□□□ -1.63
NIT3	YLR351C	UBP16	Q02863	499 aa		4.86	□□□□□ -1.63
NIT3	YLR351C	AHA1	Q12449	350 aa	Known RBP	4.86	□□□□□ -1.63
NIT3	YLR351C	SSM4	P40318	1319 aa		4.86	□□□□□ -1.63
NIT3	YLR351C	HEM1	P09950	548 aa	Predicted RBP	4.85	□□□□□ -1.63
NIT3	YLR351C	UBC1	P21734	215 aa	Known RBP	4.85	□□□□□ -1.63
NIT3	YLR351C	RPC34	P32910	317 aa		4.85	□□□□□ -1.63
NIT3	YLR351C	PSY4	P38193	441 aa		4.85	□□□□□ -1.63
NIT3	YLR351C	RIX1	P38883	763 aa	Predicted RBP	4.85	□□□□□ -1.63
NIT3	YLR351C	VPS8	P39702	1274 aa		4.85	□□□□□ -1.63
NIT3	YLR351C	EXO1	P39875	702 aa		4.85	□□□□□ -1.63
NIT3	YLR351C	COG2	P53271	262 aa		4.85	□□□□□ -1.63
NIT3	YLR351C	FMP30	Q02883	468 aa		4.85	□□□□□ -1.63
NIT3	YLR351C	YML119W	Q03208	357 aa		4.85	□□□□□ -1.63
NIT3	YLR351C	YDL242W	Q07746	117 aa		4.85	□□□□□ -1.63
NIT3	YLR351C	PCL8	Q08966	492 aa		4.85	□□□□□ -1.63
NIT3	YLR351C	BPT1	P14772	1559 aa		4.85	□□□□□ -1.63
NIT3	YLR351C	GDA1	P32621	518 aa		4.84	□□□□□ -1.63
NIT3	YLR351C	BEM3	P32873	1128 aa		4.84	□□□□□ -1.63
NIT3	YLR351C	RPF2	P36160	344 aa	Known RBP	4.84	□□□□□ -1.63
NIT3	YLR351C	EXO84	P38261	753 aa		4.84	□□□□□ -1.63
NIT3	YLR351C	TDA10	P42938	290 aa		4.84	□□□□□ -1.63
NIT3	YLR351C	IML2	P47031	731 aa		4.84	□□□□□ -1.63
NIT3	YLR351C	ECM16	Q04217	1267 aa	Known RBP	4.84	□□□□□ -1.63
NIT3	YLR351C	RAD33	Q04231	177 aa		4.84	□□□□□ -1.63
NIT3	YLR351C	LCB4	Q12246	624 aa		4.84	□□□□□ -1.63
NIT3	YLR351C	RVB2	Q12464	471 aa	Known RBP	4.84	□□□□□ -1.63
NIT3	YLR351C	YPK9	Q12697	1472 aa		4.83	□□□□□ -1.64
NIT3	YLR351C	URK1	P27515	501 aa		4.83	□□□□□ -1.64
NIT3	YLR351C	SIP1	P32578	815 aa		4.83	□□□□□ -1.64
NIT3	YLR351C	ZAP1	P47043	880 aa		4.83	□□□□□ -1.64
NIT3	YLR351C	YNL058C	P53947	316 aa		4.83	□□□□□ -1.64
NIT3	YLR351C	GTR1	Q00582	310 aa		4.83	□□□□□ -1.64
NIT3	YLR351C	MTG1	Q03151	367 aa	Predicted RBP	4.83	□□□□□ -1.64
NIT3	YLR351C	CSR1	Q06705	408 aa	Known RBP	4.83	□□□□□ -1.64
NIT3	YLR351C	BNR1	P40450	1375 aa		4.82	□□□□□ -1.64
NIT3	YLR351C	YJU2	P28320	278 aa	Predicted RBP	4.82	□□□□□ -1.64
NIT3	YLR351C	NUP120	P35729	1037 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms