RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C PHM6Q05637 104 aa4.02□□□□□ -1.77
ATG38YLR211C YDL242WQ07746 117 aa4.02□□□□□ -1.77
ATG38YLR211C PSF3Q12146 194 aa4.02□□□□□ -1.77
ATG38YLR211C CET1O13297 549 aaPredicted RBP4.01□□□□□ -1.77
ATG38YLR211C GAL4P04386 881 aa4.01□□□□□ -1.77
ATG38YLR211C KAR1P11927 433 aa4.01□□□□□ -1.77
ATG38YLR211C YUR1P26725 428 aa4.01□□□□□ -1.77
ATG38YLR211C ASK1P35734 292 aa4.01□□□□□ -1.77
ATG38YLR211C KES1P35844 434 aaKnown RBP4.01□□□□□ -1.77
ATG38YLR211C FTH1P38310 465 aa4.01□□□□□ -1.77
ATG38YLR211C JHD1P40034 492 aa4.01□□□□□ -1.77
ATG38YLR211C MAM1P40065 302 aa4.01□□□□□ -1.77
ATG38YLR211C PCI8P40512 444 aa4.01□□□□□ -1.77
ATG38YLR211C IMA5P40884 581 aa4.01□□□□□ -1.77
ATG38YLR211C IDS2P46958 469 aa4.01□□□□□ -1.77
ATG38YLR211C PEX14P53112 341 aa4.01□□□□□ -1.77
ATG38YLR211C COG2P53271 262 aa4.01□□□□□ -1.77
ATG38YLR211C SCW4P53334 386 aaKnown RBP4.01□□□□□ -1.77
ATG38YLR211C COP1P53622 1201 aaKnown RBP4.01□□□□□ -1.77
ATG38YLR211C BI2P03873 423 aa4□□□□□ -1.77
ATG38YLR211C ADH4P10127 382 aa4□□□□□ -1.77
ATG38YLR211C PHO3P24031 467 aa4□□□□□ -1.77
ATG38YLR211C TGL1P34163 548 aa4□□□□□ -1.77
ATG38YLR211C ERV46P39727 415 aa4□□□□□ -1.77
ATG38YLR211C ARB1P40024 610 aaKnown RBP4□□□□□ -1.77
ATG38YLR211C LAS21P40367 830 aa4□□□□□ -1.77
ATG38YLR211C UBP7P40453 1071 aa4□□□□□ -1.77
ATG38YLR211C POL31P46957 487 aa4□□□□□ -1.77
ATG38YLR211C SNU56Q03782 492 aaKnown RBP4□□□□□ -1.77
ATG38YLR211C PLM2Q04383 521 aa4□□□□□ -1.77
ATG38YLR211C HER1Q12276 1246 aa4□□□□□ -1.77
ATG38YLR211C CFD1P40558 293 aa3.99□□□□□ -1.77
ATG38YLR211C RPL15BP54780 204 aaPredicted RBP3.99□□□□□ -1.77
ATG38YLR211C TRI1Q05024 226 aa3.99□□□□□ -1.77
ATG38YLR211C NUR1Q12066 484 aa3.99□□□□□ -1.77
ATG38YLR211C LYS21Q12122 440 aaKnown RBP3.99□□□□□ -1.77
ATG38YLR211C YPR089WO13585 888 aa3.98□□□□□ -1.77
ATG38YLR211C SES1P07284 462 aaKnown RBP3.98□□□□□ -1.77
ATG38YLR211C VAS1P07806 1104 aaKnown RBP3.98□□□□□ -1.77
ATG38YLR211C KGD2P19262 463 aaPredicted RBP3.98□□□□□ -1.77
ATG38YLR211C YCP4P25349 247 aaKnown RBP3.98□□□□□ -1.77
ATG38YLR211C RPS7AP26786 190 aaKnown RBP3.98□□□□□ -1.77
ATG38YLR211C VFA1P40080 203 aa3.98□□□□□ -1.77
ATG38YLR211C CIR1P42940 261 aa3.98□□□□□ -1.77
ATG38YLR211C FOL1P53848 824 aa3.98□□□□□ -1.77
ATG38YLR211C ARA2Q04212 335 aa3.98□□□□□ -1.77
ATG38YLR211C YER175W-AQ8TGU4 54 aa3.98□□□□□ -1.77
ATG38YLR211C COQ3P27680 312 aa3.97□□□□□ -1.77
ATG38YLR211C FLO5P38894 1075 aa3.97□□□□□ -1.77
ATG38YLR211C RAD26P40352 1085 aa3.97□□□□□ -1.77
ATG38YLR211C CEG1Q01159 459 aaPredicted RBP3.97□□□□□ -1.77
ATG38YLR211C CRF1Q04930 467 aa3.97□□□□□ -1.77
ATG38YLR211C PXL1P36166 706 aa3.96□□□□□ -1.78
ATG38YLR211C SPC97P38863 823 aa3.96□□□□□ -1.78
ATG38YLR211C YMR124WP39523 943 aaKnown RBP3.96□□□□□ -1.78
ATG38YLR211C SWD1P39706 426 aa3.96□□□□□ -1.78
ATG38YLR211C MEP2P41948 499 aa3.96□□□□□ -1.78
ATG38YLR211C CNM67P53865 581 aaKnown RBP3.96□□□□□ -1.78
ATG38YLR211C TGL2P54857 326 aa3.96□□□□□ -1.78
ATG38YLR211C PFA4Q12006 378 aa3.96□□□□□ -1.78
ATG38YLR211C GSH1P32477 678 aa3.95□□□□□ -1.78
ATG38YLR211C ERC1P38767 581 aa3.95□□□□□ -1.78
ATG38YLR211C RRP8P38961 392 aaKnown RBP3.95□□□□□ -1.78
ATG38YLR211C YNL034WP53963 612 aa3.95□□□□□ -1.78
ATG38YLR211C AIM44Q99299 758 aa3.95□□□□□ -1.78
ATG38YLR211C AIM17P23180 465 aaKnown RBP3.94□□□□□ -1.78
ATG38YLR211C MGM1P32266 881 aa3.94□□□□□ -1.78
ATG38YLR211C VBA2P38358 474 aaKnown RBP3.94□□□□□ -1.78
ATG38YLR211C YLF2P38746 405 aa3.94□□□□□ -1.78
ATG38YLR211C LNP1P38878 278 aa3.94□□□□□ -1.78
ATG38YLR211C NOP2P40991 618 aaKnown RBP3.94□□□□□ -1.78
ATG38YLR211C ESF2P53743 316 aaKnown RBP3.94□□□□□ -1.78
ATG38YLR211C YAT1P80235 687 aa3.94□□□□□ -1.78
ATG38YLR211C AAD4Q07747 329 aa3.94□□□□□ -1.78
ATG38YLR211C YOR389WQ08912 624 aa3.94□□□□□ -1.78
ATG38YLR211C GET3Q12154 354 aaKnown RBP3.94□□□□□ -1.78
ATG38YLR211C MRC1P25588 1096 aa3.93□□□□□ -1.78
ATG38YLR211C RPT3P33298 428 aaKnown RBP3.93□□□□□ -1.78
ATG38YLR211C GND1P38720 489 aaKnown RBP3.93□□□□□ -1.78
ATG38YLR211C LYS20P48570 428 aaKnown RBP3.93□□□□□ -1.78
ATG38YLR211C CRD1Q07560 283 aa3.93□□□□□ -1.78
ATG38YLR211C AIM6Q07716 390 aa3.93□□□□□ -1.78
ATG38YLR211C ICL2Q12031 575 aa3.93□□□□□ -1.78
ATG38YLR211C CTT1P06115 562 aa3.92□□□□□ -1.78
ATG38YLR211C FRD1P32614 470 aaKnown RBP3.92□□□□□ -1.78
ATG38YLR211C STB2P46679 850 aa3.92□□□□□ -1.78
ATG38YLR211C ASK10P48361 1146 aa3.92□□□□□ -1.78
ATG38YLR211C YNL058CP53947 316 aa3.92□□□□□ -1.78
ATG38YLR211C ILS1P09436 1072 aaKnown RBP3.91□□□□□ -1.78
ATG38YLR211C SEC18P18759 758 aaKnown RBP3.91□□□□□ -1.78
ATG38YLR211C SDS22P36047 338 aa3.91□□□□□ -1.78
ATG38YLR211C SAW1P39735 261 aa3.91□□□□□ -1.78
ATG38YLR211C NPA3P47122 385 aa3.91□□□□□ -1.78
ATG38YLR211C VPS64Q03944 604 aa3.91□□□□□ -1.78
ATG38YLR211C MRPL1Q04599 285 aa3.91□□□□□ -1.78
ATG38YLR211C YPL191CQ08930 360 aa3.91□□□□□ -1.78
ATG38YLR211C TAF5P38129 798 aa3.9□□□□□ -1.79
ATG38YLR211C YIL152WP40455 235 aa3.9□□□□□ -1.79
ATG38YLR211C CDC1P40986 491 aa3.9□□□□□ -1.79
ATG38YLR211C YJL107CP42947 387 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms