RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	MCM1	P11746	286 aa		4.9	□□□□□ -1.63
APS1	YLR170C	REV1	P12689	985 aa		4.9	□□□□□ -1.63
APS1	YLR170C	PPH22	P23595	377 aa		4.9	□□□□□ -1.63
APS1	YLR170C	RNQ1	P25367	405 aa		4.9	□□□□□ -1.63
APS1	YLR170C	PAP1	P29468	568 aa	Known RBP	4.9	□□□□□ -1.63
APS1	YLR170C	MFT1	P33441	392 aa	Known RBP	4.9	□□□□□ -1.63
APS1	YLR170C	ATG12	P38316	186 aa		4.9	□□□□□ -1.63
APS1	YLR170C	FSH1	P38777	243 aa	Known RBP	4.9	□□□□□ -1.63
APS1	YLR170C	AIM18	P38884	321 aa		4.9	□□□□□ -1.63
APS1	YLR170C	PRM9	P39551	298 aa		4.9	□□□□□ -1.63
APS1	YLR170C	NDC80	P40460	691 aa		4.9	□□□□□ -1.63
APS1	YLR170C	SNG1	P46950	547 aa		4.9	□□□□□ -1.63
APS1	YLR170C	UTP8	P53276	713 aa	Known RBP	4.9	□□□□□ -1.63
APS1	YLR170C	YGR283C	P53336	341 aa	Predicted RBP	4.9	□□□□□ -1.63
APS1	YLR170C	KTR6	P54070	446 aa		4.9	□□□□□ -1.63
APS1	YLR170C	RPL34A	P87262	121 aa	Predicted RBP	4.9	□□□□□ -1.63
APS1	YLR170C	MTD1	Q02046	320 aa	Known RBP	4.9	□□□□□ -1.63
APS1	YLR170C	YPL014W	Q02606	381 aa		4.9	□□□□□ -1.63
APS1	YLR170C	PIR3	Q03180	325 aa		4.9	□□□□□ -1.63
APS1	YLR170C	SND1	Q04007	877 aa		4.9	□□□□□ -1.63
APS1	YLR170C	GYL1	Q04322	720 aa		4.9	□□□□□ -1.63
APS1	YLR170C	VTI1	Q04338	217 aa		4.9	□□□□□ -1.63
APS1	YLR170C	TDA9	Q04545	1251 aa		4.9	□□□□□ -1.63
APS1	YLR170C	THI20	Q08224	551 aa		4.9	□□□□□ -1.63
APS1	YLR170C	THI21	Q08975	551 aa		4.9	□□□□□ -1.63
APS1	YLR170C	RRD2	Q12461	358 aa		4.9	□□□□□ -1.63
APS1	YLR170C	AVL9	Q12500	764 aa		4.9	□□□□□ -1.63
APS1	YLR170C	IZH4	Q99393	312 aa		4.9	□□□□□ -1.63
APS1	YLR170C	RPS9A	O13516	197 aa	Known RBP	4.89	□□□□□ -1.63
APS1	YLR170C	MRP10	O75012	95 aa		4.89	□□□□□ -1.63
APS1	YLR170C	MIS1	P09440	975 aa	Known RBP	4.89	□□□□□ -1.63
APS1	YLR170C	PEP5	P12868	1029 aa		4.89	□□□□□ -1.63
APS1	YLR170C	KAR3	P17119	729 aa		4.89	□□□□□ -1.63
APS1	YLR170C	PET123	P17558	318 aa		4.89	□□□□□ -1.63
APS1	YLR170C	VMA4	P22203	233 aa	Known RBP	4.89	□□□□□ -1.63
APS1	YLR170C	PDE1	P22434	369 aa		4.89	□□□□□ -1.63
APS1	YLR170C	PEX34	P25584	144 aa		4.89	□□□□□ -1.63
APS1	YLR170C	YCR015C	P25616	317 aa		4.89	□□□□□ -1.63
APS1	YLR170C	RRP1	P35178	278 aa	Predicted RBP	4.89	□□□□□ -1.63
APS1	YLR170C	DUG2	P38149	878 aa		4.89	□□□□□ -1.63
APS1	YLR170C	LAM1	P38851	1228 aa		4.89	□□□□□ -1.63
APS1	YLR170C	MAD1	P40957	749 aa		4.89	□□□□□ -1.63
APS1	YLR170C	RTT101	P47050	842 aa		4.89	□□□□□ -1.63
APS1	YLR170C	NOG2	P53742	486 aa	Known RBP	4.89	□□□□□ -1.63
APS1	YLR170C	YNL040W	P53960	456 aa	Predicted RBP	4.89	□□□□□ -1.63
APS1	YLR170C	ELP3	Q02908	557 aa	Known RBP	4.89	□□□□□ -1.63
APS1	YLR170C	GCN5	Q03330	439 aa		4.89	□□□□□ -1.63
APS1	YLR170C	SPG3	Q04398	127 aa	Predicted RBP	4.89	□□□□□ -1.63
APS1	YLR170C	YMR114C	Q04471	368 aa	Known RBP	4.89	□□□□□ -1.63
APS1	YLR170C	ECI1	Q05871	280 aa		4.89	□□□□□ -1.63
APS1	YLR170C	ESC2	Q06340	456 aa		4.89	□□□□□ -1.63
APS1	YLR170C	YDR018C	Q12185	396 aa		4.89	□□□□□ -1.63
APS1	YLR170C	LPX1	Q12405	387 aa	Known RBP	4.89	□□□□□ -1.63
APS1	YLR170C	YPR117W	Q06116	2489 aa		4.89	□□□□□ -1.63
APS1	YLR170C	YMR084W	A2P2R3	262 aa		4.88	□□□□□ -1.63
APS1	YLR170C	YML002W	P0CF17	737 aa		4.88	□□□□□ -1.63
APS1	YLR170C	YIH1	P25637	258 aa		4.88	□□□□□ -1.63
APS1	YLR170C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	RIP-Chip
APS1	YLR170C	CNS1	P33313	385 aa		4.88	□□□□□ -1.63
APS1	YLR170C	BYE1	P36106	594 aa		4.88	□□□□□ -1.63
APS1	YLR170C	KAP104	P38217	918 aa	Known RBP	4.88	□□□□□ -1.63
APS1	YLR170C	YIL161W	P40449	235 aa	Known RBP	4.88	□□□□□ -1.63
APS1	YLR170C	MND2	P40577	368 aa		4.88	□□□□□ -1.63
APS1	YLR170C	CEP3	P40969	608 aa		4.88	□□□□□ -1.63
APS1	YLR170C	HLJ1	P48353	224 aa		4.88	□□□□□ -1.63
APS1	YLR170C	RFX1	P48743	811 aa		4.88	□□□□□ -1.63
APS1	YLR170C	MTO1	P53070	669 aa		4.88	□□□□□ -1.63
APS1	YLR170C	CWC22	P53333	577 aa	Known RBP	4.88	□□□□□ -1.63
APS1	YLR170C	NSE5	Q03718	556 aa		4.88	□□□□□ -1.63
APS1	YLR170C	INP2	Q03824	705 aa		4.88	□□□□□ -1.63
APS1	YLR170C	ARA2	Q04212	335 aa		4.88	□□□□□ -1.63
APS1	YLR170C	RTN1	Q04947	295 aa	Known RBP	4.88	□□□□□ -1.63
APS1	YLR170C	NOP6	Q07623	225 aa	Known RBP	4.88	□□□□□ -1.63
APS1	YLR170C	TPO1	Q07824	586 aa		4.88	□□□□□ -1.63
APS1	YLR170C	FLC1	Q08967	793 aa		4.88	□□□□□ -1.63
APS1	YLR170C	SVS1	Q12254	260 aa		4.88	□□□□□ -1.63
APS1	YLR170C	ARP7	Q12406	477 aa		4.88	□□□□□ -1.63
APS1	YLR170C	AAT2	P23542	418 aa	Known RBP	4.87	□□□□□ -1.63
APS1	YLR170C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
APS1	YLR170C	MEI4	P29467	408 aa		4.87	□□□□□ -1.63
APS1	YLR170C	SRP101	P32916	621 aa		4.87	□□□□□ -1.63
APS1	YLR170C	POL12	P38121	705 aa	Predicted RBP	4.87	□□□□□ -1.63
APS1	YLR170C	SAK1	P38990	1142 aa		4.87	□□□□□ -1.63
APS1	YLR170C	FLC2	P39719	783 aa		4.87	□□□□□ -1.63
APS1	YLR170C	EDC3	P39998	551 aa	Known RBP	4.87	□□□□□ -1.63
APS1	YLR170C	YMR134W	P40207	237 aa		4.87	□□□□□ -1.63
APS1	YLR170C	KHA1	P40309	873 aa		4.87	□□□□□ -1.63
APS1	YLR170C	RPC17	P47076	161 aa		4.87	□□□□□ -1.63
APS1	YLR170C	TCB2	P48231	1178 aa		4.87	□□□□□ -1.63
APS1	YLR170C	YPR003C	P53394	754 aa		4.87	□□□□□ -1.63
APS1	YLR170C	COP1	P53622	1201 aa	Known RBP	4.87	□□□□□ -1.63
APS1	YLR170C	YNL144C	P53907	740 aa		4.87	□□□□□ -1.63
APS1	YLR170C	VPS60	Q03390	229 aa		4.87	□□□□□ -1.63
APS1	YLR170C	AAD4	Q07747	329 aa		4.87	□□□□□ -1.63
APS1	YLR170C	YLR012C	Q07927	99 aa		4.87	□□□□□ -1.63
APS1	YLR170C	YOR387C	Q08910	206 aa		4.87	□□□□□ -1.63
APS1	YLR170C	AIM41	Q12032	185 aa		4.87	□□□□□ -1.63
APS1	YLR170C	RIO1	Q12196	484 aa	Known RBP	4.87	□□□□□ -1.63
APS1	YLR170C	NOP14	Q99207	810 aa	Known RBP	4.87	□□□□□ -1.63
APS1	YLR170C	HIS5	P07172	385 aa		4.86	□□□□□ -1.63

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