RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W PTA1Q01329 785 aaPredicted RBP2.2□□□□□ -2.06
CFT2YLR115W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
CFT2YLR115W SNU66Q12420 587 aaPredicted RBP2.2□□□□□ -2.06
CFT2YLR115W TMA17Q12513 150 aa2.2□□□□□ -2.06
CFT2YLR115W ULS1Q08562 1619 aa2.2□□□□□ -2.06
CFT2YLR115W HAP1P0CE41 1502 aa2.2□□□□□ -2.06
CFT2YLR115W FOB1O13329 566 aa2.2□□□□□ -2.06
CFT2YLR115W CAP1P28495 268 aaKnown RBP2.2□□□□□ -2.06
CFT2YLR115W PAF1P38351 445 aa2.2□□□□□ -2.06
CFT2YLR115W RIM4P38741 713 aa2.2□□□□□ -2.06
CFT2YLR115W NET1P47035 1189 aa2.2□□□□□ -2.06
CFT2YLR115W SRB7P47822 140 aa2.2□□□□□ -2.06
CFT2YLR115W GLO1P50107 326 aa2.2□□□□□ -2.06
CFT2YLR115W SAP4P53036 818 aa2.2□□□□□ -2.06
CFT2YLR115W MFM1Q02783 413 aa2.2□□□□□ -2.06
CFT2YLR115W SND1Q04007 877 aa2.2□□□□□ -2.06
CFT2YLR115W YMR018WQ04364 514 aa2.2□□□□□ -2.06
CFT2YLR115W GRC3Q07845 632 aa2.2□□□□□ -2.06
CFT2YLR115W RLP24Q07915 199 aaKnown RBP2.2□□□□□ -2.06
CFT2YLR115W YOR378WQ08902 515 aa2.2□□□□□ -2.06
CFT2YLR115W PLP2Q12017 286 aa2.2□□□□□ -2.06
CFT2YLR115W FAP7Q12055 197 aaPredicted RBP2.2□□□□□ -2.06
CFT2YLR115W AQY1P0CD91 305 aa2.19□□□□□ -2.06
CFT2YLR115W DHR2P36009 735 aaPredicted RBP2.19□□□□□ -2.06
CFT2YLR115W PIH1P38768 344 aa2.19□□□□□ -2.06
CFT2YLR115W GPP2P40106 250 aaKnown RBP2.19□□□□□ -2.06
CFT2YLR115W BST1P43571 1029 aa2.19□□□□□ -2.06
CFT2YLR115W YFL015CP43578 164 aa2.19□□□□□ -2.06
CFT2YLR115W PEF1P53238 335 aa2.19□□□□□ -2.06
CFT2YLR115W YLR352WQ06479 807 aa2.19□□□□□ -2.06
CFT2YLR115W YDL073WQ07454 984 aa2.19□□□□□ -2.06
CFT2YLR115W NGL1Q08213 363 aaKnown RBP2.19□□□□□ -2.06
CFT2YLR115W TOP2P06786 1428 aaKnown RBP2.19□□□□□ -2.06
CFT2YLR115W SPP41P38904 1435 aa2.19□□□□□ -2.06
CFT2YLR115W SEC3P33332 1336 aaKnown RBP2.19□□□□□ -2.06
CFT2YLR115W MMS22Q06164 1454 aa2.19□□□□□ -2.06
CFT2YLR115W WHI2P12611 486 aa2.19□□□□□ -2.06
CFT2YLR115W HSC82P15108 705 aaKnown RBP2.19□□□□□ -2.06
CFT2YLR115W MSM1P22438 575 aa2.19□□□□□ -2.06
CFT2YLR115W GAT1P43574 510 aa2.19□□□□□ -2.06
CFT2YLR115W IRC5P43610 853 aa2.19□□□□□ -2.06
CFT2YLR115W UBX4P54730 416 aa2.19□□□□□ -2.06
CFT2YLR115W TY1B-JR2P47100 1755 aaKnown RBP2.19□□□□□ -2.06
CFT2YLR115W TY1B-ER2Q03619 1755 aa2.19□□□□□ -2.06
CFT2YLR115W TY1B-MR1Q04214 1755 aa2.19□□□□□ -2.06
CFT2YLR115W TY1B-MR2Q04670 1755 aaKnown RBP2.19□□□□□ -2.06
CFT2YLR115W TY1B-LR1Q12088 1755 aaKnown RBP2.19□□□□□ -2.06
CFT2YLR115W TY1B-NL1Q12112 1755 aa2.19□□□□□ -2.06
CFT2YLR115W TY1B-GR1Q12141 1755 aa2.19□□□□□ -2.06
CFT2YLR115W TY1B-BLQ12490 1755 aa2.19□□□□□ -2.06
CFT2YLR115W CYB2P00175 591 aa2.18□□□□□ -2.06
CFT2YLR115W PGI1P12709 554 aaKnown RBP2.18□□□□□ -2.06
CFT2YLR115W VPS33P20795 691 aa2.18□□□□□ -2.06
CFT2YLR115W RNR3P21672 869 aaKnown RBP2.18□□□□□ -2.06
CFT2YLR115W BRF1P29056 596 aa2.18□□□□□ -2.06
CFT2YLR115W ECM32P32644 1121 aaKnown RBP2.18□□□□□ -2.06
CFT2YLR115W TMA108P40462 946 aa2.18□□□□□ -2.06
CFT2YLR115W TDA10P42938 290 aa2.18□□□□□ -2.06
CFT2YLR115W RCF1Q03713 159 aa2.18□□□□□ -2.06
CFT2YLR115W IMH1Q06704 911 aaKnown RBP2.18□□□□□ -2.06
CFT2YLR115W TRE2Q08693 809 aa2.18□□□□□ -2.06
CFT2YLR115W CIR2Q08822 631 aa2.18□□□□□ -2.06
CFT2YLR115W YPL216WQ08964 1102 aa2.18□□□□□ -2.06
CFT2YLR115W MYO4P32492 1471 aa2.18□□□□□ -2.06
CFT2YLR115W SNT2P53127 1403 aa2.18□□□□□ -2.06
CFT2YLR115W DAL5P15365 543 aa2.18□□□□□ -2.06
CFT2YLR115W PTP1P25044 335 aa2.18□□□□□ -2.06
CFT2YLR115W NFU1P32860 256 aa2.18□□□□□ -2.06
CFT2YLR115W PEA2P40091 420 aa2.18□□□□□ -2.06
CFT2YLR115W ENP2P48234 707 aaKnown RBP2.18□□□□□ -2.06
CFT2YLR115W ATP22P50273 684 aaPredicted RBP2.18□□□□□ -2.06
CFT2YLR115W PEX14P53112 341 aa2.18□□□□□ -2.06
CFT2YLR115W PHM6Q05637 104 aa2.18□□□□□ -2.06
CFT2YLR115W PCL8Q08966 492 aa2.18□□□□□ -2.06
CFT2YLR115W AIM41Q12032 185 aa2.18□□□□□ -2.06
CFT2YLR115W RTP1Q12751 981 aa2.18□□□□□ -2.06
CFT2YLR115W SUI2P20459 304 aaKnown RBP2.17□□□□□ -2.06
CFT2YLR115W GSY2P27472 705 aa2.17□□□□□ -2.06
CFT2YLR115W CCL1P37366 393 aa2.17□□□□□ -2.06
CFT2YLR115W ENP1P38333 483 aaKnown RBP2.17□□□□□ -2.06
CFT2YLR115W SRP68P38687 599 aaKnown RBP2.17□□□□□ -2.06
CFT2YLR115W ULP2P40537 1034 aaPredicted RBP2.17□□□□□ -2.06
CFT2YLR115W VTC2P43585 828 aa2.17□□□□□ -2.06
CFT2YLR115W DUG1P43616 481 aaKnown RBP2.17□□□□□ -2.06
CFT2YLR115W NMD5P46970 1048 aa2.17□□□□□ -2.06
CFT2YLR115W IML2P47031 731 aa2.17□□□□□ -2.06
CFT2YLR115W PSR2Q07949 397 aa2.17□□□□□ -2.06
CFT2YLR115W GEP3Q08622 556 aa2.17□□□□□ -2.06
CFT2YLR115W RGT2Q12300 763 aa2.17□□□□□ -2.06
CFT2YLR115W BCK1Q01389 1478 aa2.17□□□□□ -2.06
CFT2YLR115W TUF1P02992 437 aaKnown RBP2.17□□□□□ -2.06
CFT2YLR115W YJU2P28320 278 aaPredicted RBP2.17□□□□□ -2.06
CFT2YLR115W CHS3P29465 1165 aa2.17□□□□□ -2.06
CFT2YLR115W DGR2P32330 852 aa2.17□□□□□ -2.06
CFT2YLR115W VPH1P32563 840 aaKnown RBP2.17□□□□□ -2.06
CFT2YLR115W LOT5P34234 306 aa2.17□□□□□ -2.06
CFT2YLR115W YKL050CP35736 922 aa2.17□□□□□ -2.06
CFT2YLR115W YJL193WP39542 402 aa2.17□□□□□ -2.06
CFT2YLR115W NDE1P40215 560 aa2.17□□□□□ -2.06
CFT2YLR115W SPC105P53148 917 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms