RNA–Protein interactions for RNA: YKL138C-A

HSK3, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeastyeast

Gene HSK3, Length 210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSK3YKL138C-A PEX15Q08215 383 aa2.42□□□□□ -2.02
HSK3YKL138C-A NYV1Q12255 253 aa2.42□□□□□ -2.02
HSK3YKL138C-A DBP10Q12389 995 aaKnown RBP2.42□□□□□ -2.02
HSK3YKL138C-A PNO1Q99216 274 aaKnown RBP2.42□□□□□ -2.02
HSK3YKL138C-A SEC12P11655 471 aa2.41□□□□□ -2.02
HSK3YKL138C-A PET309P32522 965 aaPredicted RBP2.41□□□□□ -2.02
HSK3YKL138C-A YKL133CP36066 463 aa2.41□□□□□ -2.02
HSK3YKL138C-A SAP1P39955 897 aaKnown RBP2.41□□□□□ -2.02
HSK3YKL138C-A UBP7P40453 1071 aa2.41□□□□□ -2.02
HSK3YKL138C-A YIL092WP40497 633 aa2.41□□□□□ -2.02
HSK3YKL138C-A YIL024CP40543 189 aa2.41□□□□□ -2.02
HSK3YKL138C-A HOL1P53389 586 aa2.41□□□□□ -2.02
HSK3YKL138C-A SUB1P54000 292 aaKnown RBP2.41□□□□□ -2.02
HSK3YKL138C-A YPL071CQ02864 156 aa2.41□□□□□ -2.02
HSK3YKL138C-A SND1Q04007 877 aa2.41□□□□□ -2.02
HSK3YKL138C-A YML053CQ04978 212 aa2.41□□□□□ -2.02
HSK3YKL138C-A PHM6Q05637 104 aa2.41□□□□□ -2.02
HSK3YKL138C-A RAD34Q06665 692 aa2.41□□□□□ -2.02
HSK3YKL138C-A LCB4Q12246 624 aa2.41□□□□□ -2.02
HSK3YKL138C-A SST2P11972 698 aaKnown RBP2.4□□□□□ -2.03
HSK3YKL138C-A CBP3P21560 335 aa2.4□□□□□ -2.03
HSK3YKL138C-A PTP2P29461 750 aa2.4□□□□□ -2.03
HSK3YKL138C-A NIC96P34077 839 aa2.4□□□□□ -2.03
HSK3YKL138C-A PTH2P34222 208 aa2.4□□□□□ -2.03
HSK3YKL138C-A VPS24P36095 224 aaKnown RBP2.4□□□□□ -2.03
HSK3YKL138C-A FTH1P38310 465 aa2.4□□□□□ -2.03
HSK3YKL138C-A MTG2P38860 518 aa2.4□□□□□ -2.03
HSK3YKL138C-A ERV46P39727 415 aa2.4□□□□□ -2.03
HSK3YKL138C-A SCS2P40075 244 aaKnown RBP2.4□□□□□ -2.03
HSK3YKL138C-A IMA5P40884 581 aa2.4□□□□□ -2.03
HSK3YKL138C-A CIN1P40987 1014 aa2.4□□□□□ -2.03
HSK3YKL138C-A IRC8P47046 822 aa2.4□□□□□ -2.03
HSK3YKL138C-A SCW4P53334 386 aaKnown RBP2.4□□□□□ -2.03
HSK3YKL138C-A CRT10Q08226 957 aa2.4□□□□□ -2.03
HSK3YKL138C-A RRP6Q12149 733 aaKnown RBP2.4□□□□□ -2.03
HSK3YKL138C-A HOS1Q12214 470 aa2.4□□□□□ -2.03
HSK3YKL138C-A HER1Q12276 1246 aa2.4□□□□□ -2.03
HSK3YKL138C-A CHO2P05374 869 aaKnown RBP2.39□□□□□ -2.03
HSK3YKL138C-A ADH4P10127 382 aa2.39□□□□□ -2.03
HSK3YKL138C-A YCR061WP25639 631 aa2.39□□□□□ -2.03
HSK3YKL138C-A PRP45P28004 379 aaPredicted RBP2.39□□□□□ -2.03
HSK3YKL138C-A ASK1P35734 292 aa2.39□□□□□ -2.03
HSK3YKL138C-A FLO5P38894 1075 aa2.39□□□□□ -2.03
HSK3YKL138C-A SSP120P39931 234 aaKnown RBP2.39□□□□□ -2.03
HSK3YKL138C-A ARB1P40024 610 aaKnown RBP2.39□□□□□ -2.03
HSK3YKL138C-A COP1P53622 1201 aaKnown RBP2.39□□□□□ -2.03
HSK3YKL138C-A CNM67P53865 581 aaKnown RBP2.39□□□□□ -2.03
HSK3YKL138C-A RPL15BP54780 204 aaPredicted RBP2.39□□□□□ -2.03
HSK3YKL138C-A TGL2P54857 326 aa2.39□□□□□ -2.03
HSK3YKL138C-A TRS31Q03337 283 aa2.39□□□□□ -2.03
HSK3YKL138C-A SNU56Q03782 492 aaKnown RBP2.39□□□□□ -2.03
HSK3YKL138C-A ENT2Q05785 613 aa2.39□□□□□ -2.03
HSK3YKL138C-A MLC2Q06580 163 aa2.39□□□□□ -2.03
HSK3YKL138C-A YDL242WQ07746 117 aa2.39□□□□□ -2.03
HSK3YKL138C-A PFA4Q12006 378 aa2.39□□□□□ -2.03
HSK3YKL138C-A NUR1Q12066 484 aa2.39□□□□□ -2.03
HSK3YKL138C-A YEF3P16521 1044 aaKnown RBP2.38□□□□□ -2.03
HSK3YKL138C-A YCP4P25349 247 aaKnown RBP2.38□□□□□ -2.03
HSK3YKL138C-A RPS7AP26786 190 aaKnown RBP2.38□□□□□ -2.03
HSK3YKL138C-A KES1P35844 434 aaKnown RBP2.38□□□□□ -2.03
HSK3YKL138C-A SDS22P36047 338 aa2.38□□□□□ -2.03
HSK3YKL138C-A TAF5P38129 798 aa2.38□□□□□ -2.03
HSK3YKL138C-A PCI8P40512 444 aa2.38□□□□□ -2.03
HSK3YKL138C-A MNT3P40549 630 aa2.38□□□□□ -2.03
HSK3YKL138C-A IRC7P43623 340 aa2.38□□□□□ -2.03
HSK3YKL138C-A POL31P46957 487 aa2.38□□□□□ -2.03
HSK3YKL138C-A IDS2P46958 469 aa2.38□□□□□ -2.03
HSK3YKL138C-A YNL034WP53963 612 aa2.38□□□□□ -2.03
HSK3YKL138C-A UBX4P54730 416 aa2.38□□□□□ -2.03
HSK3YKL138C-A MET14Q02196 202 aa2.38□□□□□ -2.03
HSK3YKL138C-A ARA2Q04212 335 aa2.38□□□□□ -2.03
HSK3YKL138C-A PSR2Q07949 397 aa2.38□□□□□ -2.03
HSK3YKL138C-A MPD2Q99316 277 aa2.38□□□□□ -2.03
HSK3YKL138C-A CET1O13297 549 aaPredicted RBP2.37□□□□□ -2.03
HSK3YKL138C-A BI2P03873 423 aa2.37□□□□□ -2.03
HSK3YKL138C-A GAL1P04385 528 aa2.37□□□□□ -2.03
HSK3YKL138C-A SES1P07284 462 aaKnown RBP2.37□□□□□ -2.03
HSK3YKL138C-A PHO3P24031 467 aa2.37□□□□□ -2.03
HSK3YKL138C-A COQ3P27680 312 aa2.37□□□□□ -2.03
HSK3YKL138C-A TGL1P34163 548 aa2.37□□□□□ -2.03
HSK3YKL138C-A NAB3P38996 802 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
HSK3YKL138C-A SAW1P39735 261 aa2.37□□□□□ -2.03
HSK3YKL138C-A JHD1P40034 492 aa2.37□□□□□ -2.03
HSK3YKL138C-A PUS4P48567 403 aaKnown RBP2.37□□□□□ -2.03
HSK3YKL138C-A COG2P53271 262 aa2.37□□□□□ -2.03
HSK3YKL138C-A CEG1Q01159 459 aaPredicted RBP2.37□□□□□ -2.03
HSK3YKL138C-A ATG16Q03818 150 aa2.37□□□□□ -2.03
HSK3YKL138C-A PLM2Q04383 521 aa2.37□□□□□ -2.03
HSK3YKL138C-A CRF1Q04930 467 aa2.37□□□□□ -2.03
HSK3YKL138C-A LYS21Q12122 440 aaKnown RBP2.37□□□□□ -2.03
HSK3YKL138C-A PSF3Q12146 194 aa2.37□□□□□ -2.03
HSK3YKL138C-A YPR089WO13585 888 aa2.36□□□□□ -2.03
HSK3YKL138C-A PGI1P12709 554 aaKnown RBP2.36□□□□□ -2.03
HSK3YKL138C-A PHO81P17442 1178 aa2.36□□□□□ -2.03
HSK3YKL138C-A GSH1P32477 678 aa2.36□□□□□ -2.03
HSK3YKL138C-A PXL1P36166 706 aa2.36□□□□□ -2.03
HSK3YKL138C-A GND1P38720 489 aaKnown RBP2.36□□□□□ -2.03
HSK3YKL138C-A YMR124WP39523 943 aaKnown RBP2.36□□□□□ -2.03
HSK3YKL138C-A MAM1P40065 302 aa2.36□□□□□ -2.03
HSK3YKL138C-A VFA1P40080 203 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms