RNA–Protein interactions for RNA: YIR022W

SEC11, Transcript of 18kDa catalytic subunit of the Signal Peptidase Complex (SPC), yeast

Gene SEC11, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC11	YIR022W	AI5_ALPHA	Q9ZZX1	630 aa		11.92	□□□□□ -0.5
SEC11	YIR022W	RIF1	P29539	1916 aa		11.92	□□□□□ -0.5
SEC11	YIR022W	ERR1	P0CX10	437 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	ERR2	P0CX11	437 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	HSC82	P15108	705 aa	Known RBP	11.91	□□□□□ -0.5
SEC11	YIR022W	TSR4	P25040	408 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	NUF2	P33895	451 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	INP51	P40559	946 aa	Known RBP	11.91	□□□□□ -0.5
SEC11	YIR022W	ERR3	P42222	437 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	BNA3	P47039	444 aa	Known RBP	11.91	□□□□□ -0.5
SEC11	YIR022W	ZAP1	P47043	880 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	ACF4	P47129	309 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	JJJ3	P47138	172 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	PSP2	P50109	593 aa	Known RBP	11.91	□□□□□ -0.5
SEC11	YIR022W	SLU7	Q02775	382 aa	Known RBP	11.91	□□□□□ -0.5
SEC11	YIR022W	SLD5	Q03406	294 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	APC9	Q12107	265 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	LDB17	Q12342	491 aa		11.91	□□□□□ -0.5
SEC11	YIR022W	YPR089W	O13585	888 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	AMD2	P22580	549 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	GID7	P25569	745 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	ADY2	P25613	283 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	ATP7	P30902	174 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	HXT3	P32466	567 aa	Known RBP	11.9	□□□□□ -0.5
SEC11	YIR022W	RIB7	P33312	244 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	GUA1	P38625	525 aa	Known RBP	11.9	□□□□□ -0.5
SEC11	YIR022W	YJR054W	P47114	497 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	AZR1	P50080	613 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	MNP1	P53163	194 aa	Predicted RBP	11.9	□□□□□ -0.5
SEC11	YIR022W	YGR283C	P53336	341 aa	Predicted RBP	11.9	□□□□□ -0.5
SEC11	YIR022W	SKI8	Q02793	397 aa	Predicted RBP	11.9	□□□□□ -0.5
SEC11	YIR022W	TFB3	Q03290	321 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	DYN3	Q04949	312 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	ORM2	Q06144	216 aa		11.9	□□□□□ -0.5
SEC11	YIR022W	RHO2	P06781	192 aa		11.89	□□□□□ -0.51
SEC11	YIR022W	GAP1	P19145	602 aa	Predicted RBP	11.89	□□□□□ -0.51
SEC11	YIR022W	YCL068C	P25593	260 aa		11.89	□□□□□ -0.51
SEC11	YIR022W	VBA3	P25594	458 aa		11.89	□□□□□ -0.51
SEC11	YIR022W	CCR4	P31384	837 aa	Known RBP	11.89	□□□□□ -0.51
SEC11	YIR022W	UTP11	P34247	250 aa	Predicted RBP	11.89	□□□□□ -0.51
SEC11	YIR022W	VBA5	P36172	582 aa		11.89	□□□□□ -0.51
SEC11	YIR022W	GGA2	P38817	585 aa	Known RBP	11.89	□□□□□ -0.51
SEC11	YIR022W	GPB2	P39717	880 aa		11.89	□□□□□ -0.51
SEC11	YIR022W	ARB1	P40024	610 aa	Known RBP	11.89	□□□□□ -0.51
SEC11	YIR022W	HPM1	P40481	377 aa		11.89	□□□□□ -0.51
SEC11	YIR022W	FET4	P40988	552 aa		11.89	□□□□□ -0.51
SEC11	YIR022W	YFL012W	P43580	148 aa		11.89	□□□□□ -0.51
SEC11	YIR022W	RPA14	P50106	137 aa		11.89	□□□□□ -0.51
SEC11	YIR022W	NAN1	Q02931	896 aa	Known RBP	11.89	□□□□□ -0.51
SEC11	YIR022W	MZM1	Q03429	123 aa	Predicted RBP	11.89	□□□□□ -0.51
SEC11	YIR022W	THI20	Q08224	551 aa		11.89	□□□□□ -0.51
SEC11	YIR022W	BUD2	P33314	1104 aa		11.88	□□□□□ -0.51
SEC11	YIR022W	IES5	P40060	125 aa		11.88	□□□□□ -0.51
SEC11	YIR022W	GET1	P53192	235 aa		11.88	□□□□□ -0.51
SEC11	YIR022W	SQS1	P53866	767 aa	Known RBP	11.88	□□□□□ -0.51
SEC11	YIR022W	CWC21	Q03375	135 aa	Known RBP	11.88	□□□□□ -0.51
SEC11	YIR022W	CDC123	Q05791	360 aa		11.88	□□□□□ -0.51
SEC11	YIR022W	RSC2	Q06488	889 aa		11.88	□□□□□ -0.51
SEC11	YIR022W	NRT1	Q08485	598 aa		11.88	□□□□□ -0.51
SEC11	YIR022W	SPE3	Q12074	293 aa	Known RBP	11.88	□□□□□ -0.51
SEC11	YIR022W	CHS5	Q12114	671 aa	Known RBP	11.88	□□□□□ -0.51
SEC11	YIR022W	ZPS1	Q12512	249 aa		11.88	□□□□□ -0.51
SEC11	YIR022W	RPL4A	P10664	362 aa	Known RBP	11.87	□□□□□ -0.51
SEC11	YIR022W	CLB3	P24870	427 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	MSH2	P25847	964 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	PRR1	P28708	518 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	AEP1	P32493	518 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	RPT5	P33297	434 aa	Known RBP	11.87	□□□□□ -0.51
SEC11	YIR022W	KDX1	P36005	433 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	ATG12	P38316	186 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	AIM18	P38884	321 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	AVT2	P39981	480 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	SPR3	P41901	512 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	MNN11	P46985	422 aa	Known RBP	11.87	□□□□□ -0.51
SEC11	YIR022W	YJL132W	P47014	750 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	RPL4B	P49626	362 aa	Known RBP	11.87	□□□□□ -0.51
SEC11	YIR022W	ARC35	P53731	342 aa	Known RBP	11.87	□□□□□ -0.51
SEC11	YIR022W	RNY1	Q02933	434 aa	Known RBP	11.87	□□□□□ -0.51
SEC11	YIR022W	RAD30	Q04049	632 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	DOT1	Q04089	582 aa	Known RBP	11.87	□□□□□ -0.51
SEC11	YIR022W	KRE28	Q04431	385 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	FAR10	Q06001	478 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	YDL073W	Q07454	984 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	ENT4	Q07872	247 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	DIS3	Q08162	1001 aa	Known RBP	11.87	□□□□□ -0.51
SEC11	YIR022W	YPR027C	Q12079	277 aa		11.87	□□□□□ -0.51
SEC11	YIR022W	SEC15	P22224	910 aa		11.86	□□□□□ -0.51
SEC11	YIR022W	RME1	P32338	300 aa	Known RBP	11.86	□□□□□ -0.51
SEC11	YIR022W	SSE2	P32590	693 aa	Known RBP	11.86	□□□□□ -0.51
SEC11	YIR022W	IXR1	P33417	597 aa		11.86	□□□□□ -0.51
SEC11	YIR022W	EAP1	P36041	632 aa	Known RBP	11.86	□□□□□ -0.51
SEC11	YIR022W	SRL3	P36167	246 aa		11.86	□□□□□ -0.51
SEC11	YIR022W	ARN1	P38731	627 aa		11.86	□□□□□ -0.51
SEC11	YIR022W	FIR1	P40020	876 aa		11.86	□□□□□ -0.51
SEC11	YIR022W	MGS1	P40151	587 aa		11.86	□□□□□ -0.51
SEC11	YIR022W	SEC28	P40509	296 aa	Known RBP	11.86	□□□□□ -0.51
SEC11	YIR022W	STB1	P42845	420 aa		11.86	□□□□□ -0.51
SEC11	YIR022W	YGR054W	P53235	642 aa	Known RBP	11.86	□□□□□ -0.51
SEC11	YIR022W	REX2	P54964	269 aa	Known RBP	11.86	□□□□□ -0.51
SEC11	YIR022W	VPS54	Q12071	889 aa		11.86	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 94.6 ms