RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C RPS4AP0CX35 261 aaKnown RBP3.52□□□□□ -1.85
SHQ1YIL104C RPS4BP0CX36 261 aaKnown RBP3.52□□□□□ -1.85
SHQ1YIL104C PUT4P15380 627 aa3.52□□□□□ -1.85
SHQ1YIL104C PYC2P32327 1180 aaKnown RBP3.52□□□□□ -1.85
SHQ1YIL104C MET4P32389 672 aa3.52□□□□□ -1.85
SHQ1YIL104C SRB2P34162 210 aa3.52□□□□□ -1.85
SHQ1YIL104C RRT2P38332 387 aa3.52□□□□□ -1.85
SHQ1YIL104C TDA3P38758 523 aa3.52□□□□□ -1.85
SHQ1YIL104C SMC2P38989 1170 aaKnown RBP3.52□□□□□ -1.85
SHQ1YIL104C PSY2P40164 858 aa3.52□□□□□ -1.85
SHQ1YIL104C SNG1P46950 547 aa3.52□□□□□ -1.85
SHQ1YIL104C VPS25P47142 202 aa3.52□□□□□ -1.85
SHQ1YIL104C UTP8P53276 713 aaKnown RBP3.52□□□□□ -1.85
SHQ1YIL104C YGR283CP53336 341 aaPredicted RBP3.52□□□□□ -1.85
SHQ1YIL104C AIM32Q04689 311 aa3.52□□□□□ -1.85
SHQ1YIL104C YCG1Q06680 1035 aa3.52□□□□□ -1.85
SHQ1YIL104C AIM39Q08223 395 aa3.52□□□□□ -1.85
SHQ1YIL104C NBP2Q12163 236 aa3.52□□□□□ -1.85
SHQ1YIL104C MNL2Q12205 849 aa3.52□□□□□ -1.85
SHQ1YIL104C SIR1P21691 654 aa3.51□□□□□ -1.85
SHQ1YIL104C AEP2P22136 580 aa3.51□□□□□ -1.85
SHQ1YIL104C PEX34P25584 144 aa3.51□□□□□ -1.85
SHQ1YIL104C MFT1P33441 392 aaKnown RBP3.51□□□□□ -1.85
SHQ1YIL104C RDH54P38086 958 aa3.51□□□□□ -1.85
SHQ1YIL104C DUG2P38149 878 aa3.51□□□□□ -1.85
SHQ1YIL104C SHE3P38272 425 aaKnown RBP3.51□□□□□ -1.85
SHQ1YIL104C HSL7P38274 827 aa3.51□□□□□ -1.85
SHQ1YIL104C LCP5P40079 357 aaPredicted RBP3.51□□□□□ -1.85
SHQ1YIL104C TMA108P40462 946 aa3.51□□□□□ -1.85
SHQ1YIL104C YIL054WP40524 105 aa3.51□□□□□ -1.85
SHQ1YIL104C MKT1P40850 830 aaKnown RBP3.51□□□□□ -1.85
SHQ1YIL104C RRT5P43607 289 aa3.51□□□□□ -1.85
SHQ1YIL104C RMD8P43620 662 aa3.51□□□□□ -1.85
SHQ1YIL104C GUF1P46943 645 aa3.51□□□□□ -1.85
SHQ1YIL104C KAP114P53067 1004 aa3.51□□□□□ -1.85
SHQ1YIL104C TRM112P53738 135 aaPredicted RBP3.51□□□□□ -1.85
SHQ1YIL104C KTR6P54070 446 aa3.51□□□□□ -1.85
SHQ1YIL104C CDC55Q00362 526 aa3.51□□□□□ -1.85
SHQ1YIL104C RPN4Q03465 531 aa3.51□□□□□ -1.85
SHQ1YIL104C ARA2Q04212 335 aa3.51□□□□□ -1.85
SHQ1YIL104C SPG3Q04398 127 aaPredicted RBP3.51□□□□□ -1.85
SHQ1YIL104C SDH5Q08230 162 aa3.51□□□□□ -1.85
SHQ1YIL104C PAB1P04147 577 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SHQ1YIL104C HMG2P12684 1045 aa3.5□□□□□ -1.85
SHQ1YIL104C GFA1P14742 717 aaKnown RBP3.5□□□□□ -1.85
SHQ1YIL104C BET2P20133 325 aa3.5□□□□□ -1.85
SHQ1YIL104C PUP1P25043 261 aa3.5□□□□□ -1.85
SHQ1YIL104C ABD1P32783 436 aaPredicted RBP3.5□□□□□ -1.85
SHQ1YIL104C BLI1P35727 113 aa3.5□□□□□ -1.85
SHQ1YIL104C SWC5P38326 303 aa3.5□□□□□ -1.85
SHQ1YIL104C SMF1P38925 575 aa3.5□□□□□ -1.85
SHQ1YIL104C ERP2P39704 215 aa3.5□□□□□ -1.85
SHQ1YIL104C NUP60P39705 539 aa3.5□□□□□ -1.85
SHQ1YIL104C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SHQ1YIL104C HOP2P53187 214 aa3.5□□□□□ -1.85
SHQ1YIL104C COQ6P53318 479 aa3.5□□□□□ -1.85
SHQ1YIL104C SSY1Q03770 852 aa3.5□□□□□ -1.85
SHQ1YIL104C ATG16Q03818 150 aa3.5□□□□□ -1.85
SHQ1YIL104C UTP5Q04177 643 aaKnown RBP3.5□□□□□ -1.85
SHQ1YIL104C UFO1Q04511 668 aa3.5□□□□□ -1.85
SHQ1YIL104C TMN2Q04562 672 aa3.5□□□□□ -1.85
SHQ1YIL104C GSF2Q04697 403 aaKnown RBP3.5□□□□□ -1.85
SHQ1YIL104C SML1Q04964 104 aa3.5□□□□□ -1.85
SHQ1YIL104C ECM38Q05902 660 aaPredicted RBP3.5□□□□□ -1.85
SHQ1YIL104C KAP95Q06142 861 aaKnown RBP3.5□□□□□ -1.85
SHQ1YIL104C VAC14Q06708 880 aa3.5□□□□□ -1.85
SHQ1YIL104C SPE3Q12074 293 aaKnown RBP3.5□□□□□ -1.85
SHQ1YIL104C LAA1P39526 2014 aa3.5□□□□□ -1.85
SHQ1YIL104C YLR462WO13556 202 aa3.49□□□□□ -1.85
SHQ1YIL104C RPS14AP06367 137 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C REV1P12689 985 aa3.49□□□□□ -1.85
SHQ1YIL104C KGD2P19262 463 aaPredicted RBP3.49□□□□□ -1.85
SHQ1YIL104C SFL1P20134 766 aa3.49□□□□□ -1.85
SHQ1YIL104C VMA4P22203 233 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C PUF4P25339 888 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SHQ1YIL104C SEC1P30619 724 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C YBL055CP34220 418 aaPredicted RBP3.49□□□□□ -1.85
SHQ1YIL104C EBP2P36049 427 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C YHL049CP38722 271 aa3.49□□□□□ -1.85
SHQ1YIL104C RPS14BP39516 138 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C FLC2P39719 783 aa3.49□□□□□ -1.85
SHQ1YIL104C KHA1P40309 873 aa3.49□□□□□ -1.85
SHQ1YIL104C YIL161WP40449 235 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C YFL064CP43540 174 aa3.49□□□□□ -1.85
SHQ1YIL104C RSM26P47141 266 aa3.49□□□□□ -1.85
SHQ1YIL104C APT1P49435 187 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C PSP1P50896 841 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C VEL1P53058 206 aa3.49□□□□□ -1.85
SHQ1YIL104C GND2P53319 492 aa3.49□□□□□ -1.85
SHQ1YIL104C NOG2P53742 486 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C YNL040WP53960 456 aaPredicted RBP3.49□□□□□ -1.85
SHQ1YIL104C BET4Q00618 327 aa3.49□□□□□ -1.85
SHQ1YIL104C MTD1Q02046 320 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C LEE1Q02799 301 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C SXM1Q04175 944 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C YMR018WQ04364 514 aa3.49□□□□□ -1.85
SHQ1YIL104C YMR114CQ04471 368 aaKnown RBP3.49□□□□□ -1.85
SHQ1YIL104C TDA9Q04545 1251 aa3.49□□□□□ -1.85
SHQ1YIL104C OPY2Q06810 360 aa3.49□□□□□ -1.85
SHQ1YIL104C NDD1Q08887 554 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms