RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W YDR034W-BQ6Q5X2 51 aa5.6□□□□□ -1.51
SHE10YGL228W COX5AP00424 153 aa5.6□□□□□ -1.51
SHE10YGL228W ILS1P09436 1072 aaKnown RBP5.6□□□□□ -1.51
SHE10YGL228W APE1P14904 514 aa5.6□□□□□ -1.51
SHE10YGL228W MTF1P14908 341 aaKnown RBP5.6□□□□□ -1.51
SHE10YGL228W PPH22P23595 377 aa5.6□□□□□ -1.51
SHE10YGL228W PEX34P25584 144 aa5.6□□□□□ -1.51
SHE10YGL228W SEC6P32844 805 aa5.6□□□□□ -1.51
SHE10YGL228W MRS6P32864 603 aaKnown RBP5.6□□□□□ -1.51
SHE10YGL228W PEX28P38848 579 aa5.6□□□□□ -1.51
SHE10YGL228W TFG1P41895 735 aaPredicted RBP5.6□□□□□ -1.51
SHE10YGL228W YJL132WP47014 750 aa5.6□□□□□ -1.51
SHE10YGL228W ASN2P49090 572 aaKnown RBP5.6□□□□□ -1.51
SHE10YGL228W RTA1P53047 317 aa5.6□□□□□ -1.51
SHE10YGL228W COP1P53622 1201 aaKnown RBP5.6□□□□□ -1.51
SHE10YGL228W KTR5P53966 522 aaPredicted RBP5.6□□□□□ -1.51
SHE10YGL228W RNT1Q02555 471 aa5.6□□□□□ -1.51
SHE10YGL228W SPE3Q12074 293 aaKnown RBP5.6□□□□□ -1.51
SHE10YGL228W YEL077CQ3E7X8 1277 aa5.6□□□□□ -1.51
SHE10YGL228W HMG2P12684 1045 aa5.59□□□□□ -1.51
SHE10YGL228W MRPL25P23369 157 aa5.59□□□□□ -1.51
SHE10YGL228W SYN8P31377 255 aa5.59□□□□□ -1.51
SHE10YGL228W YIL161WP40449 235 aaKnown RBP5.59□□□□□ -1.51
SHE10YGL228W BST1P43571 1029 aa5.59□□□□□ -1.51
SHE10YGL228W ROK1P45818 564 aaPredicted RBP5.59□□□□□ -1.51
SHE10YGL228W MRX6P48564 524 aa5.59□□□□□ -1.51
SHE10YGL228W PRP24P49960 444 aaKnown RBP5.59□□□□□ -1.51
SHE10YGL228W PCL10P53124 433 aa5.59□□□□□ -1.51
SHE10YGL228W ENT5Q03769 411 aaKnown RBP5.59□□□□□ -1.51
SHE10YGL228W BUD22Q04347 519 aaKnown RBP5.59□□□□□ -1.51
SHE10YGL228W YCS4Q06156 1176 aa5.59□□□□□ -1.51
SHE10YGL228W CUE5Q08412 411 aaKnown RBP5.59□□□□□ -1.51
SHE10YGL228W SLD7Q08457 257 aa5.59□□□□□ -1.51
SHE10YGL228W LDB17Q12342 491 aa5.59□□□□□ -1.51
SHE10YGL228W YCR051WP25631 222 aa5.58□□□□□ -1.52
SHE10YGL228W PSE1P32337 1089 aaKnown RBP5.58□□□□□ -1.52
SHE10YGL228W ETR1P38071 380 aa5.58□□□□□ -1.52
SHE10YGL228W KTR4P38131 464 aa5.58□□□□□ -1.52
SHE10YGL228W SPC97P38863 823 aa5.58□□□□□ -1.52
SHE10YGL228W VPS41P38959 992 aa5.58□□□□□ -1.52
SHE10YGL228W DLD2P46681 530 aaKnown RBP5.58□□□□□ -1.52
SHE10YGL228W DMA2P53924 522 aa5.58□□□□□ -1.52
SHE10YGL228W DOS2P54858 310 aa5.58□□□□□ -1.52
SHE10YGL228W MSH6Q03834 1242 aa5.58□□□□□ -1.52
SHE10YGL228W YET3Q07451 203 aa5.58□□□□□ -1.52
SHE10YGL228W SGO1Q08490 590 aa5.58□□□□□ -1.52
SHE10YGL228W SSC1P0CS90 654 aaKnown RBP5.57□□□□□ -1.52
SHE10YGL228W SRV2P17555 526 aaKnown RBP5.57□□□□□ -1.52
SHE10YGL228W SIR1P21691 654 aa5.57□□□□□ -1.52
SHE10YGL228W YCL068CP25593 260 aa5.57□□□□□ -1.52
SHE10YGL228W OXP1P28273 1286 aa5.57□□□□□ -1.52
SHE10YGL228W URA10P30402 227 aa5.57□□□□□ -1.52
SHE10YGL228W GDA1P32621 518 aa5.57□□□□□ -1.52
SHE10YGL228W SRP101P32916 621 aa5.57□□□□□ -1.52
SHE10YGL228W SGE1P33335 543 aa5.57□□□□□ -1.52
SHE10YGL228W YKR023WP36119 530 aaKnown RBP5.57□□□□□ -1.52
SHE10YGL228W FUI1P38196 639 aa5.57□□□□□ -1.52
SHE10YGL228W ELO3P40319 345 aa5.57□□□□□ -1.52
SHE10YGL228W MOB1P40484 314 aa5.57□□□□□ -1.52
SHE10YGL228W DPH1P40487 425 aaKnown RBP5.57□□□□□ -1.52
SHE10YGL228W AMA1P50082 593 aa5.57□□□□□ -1.52
SHE10YGL228W REG1Q00816 1014 aa5.57□□□□□ -1.52
SHE10YGL228W TDA5Q06417 326 aaKnown RBP5.57□□□□□ -1.52
SHE10YGL228W PEX15Q08215 383 aa5.57□□□□□ -1.52
SHE10YGL228W NCA2Q12374 616 aa5.57□□□□□ -1.52
SHE10YGL228W ERG20P08524 352 aaKnown RBP5.57□□□□□ -1.52
SHE10YGL228W COQ8P27697 501 aa5.57□□□□□ -1.52
SHE10YGL228W KAR9P32526 644 aa5.57□□□□□ -1.52
SHE10YGL228W ADD66P36040 267 aa5.57□□□□□ -1.52
SHE10YGL228W POL12P38121 705 aaPredicted RBP5.57□□□□□ -1.52
SHE10YGL228W SRP68P38687 599 aaKnown RBP5.57□□□□□ -1.52
SHE10YGL228W VAC8P39968 578 aa5.57□□□□□ -1.52
SHE10YGL228W UBP7P40453 1071 aa5.57□□□□□ -1.52
SHE10YGL228W BIO4P53630 237 aa5.57□□□□□ -1.52
SHE10YGL228W HST2P53686 357 aa5.57□□□□□ -1.52
SHE10YGL228W YNR063WP53749 607 aa5.57□□□□□ -1.52
SHE10YGL228W RNY1Q02933 434 aaKnown RBP5.57□□□□□ -1.52
SHE10YGL228W RTN1Q04947 295 aaKnown RBP5.57□□□□□ -1.52
SHE10YGL228W FAR8Q05040 523 aa5.57□□□□□ -1.52
SHE10YGL228W YLR012CQ07927 99 aa5.57□□□□□ -1.52
SHE10YGL228W BUD20Q08004 166 aaPredicted RBP5.57□□□□□ -1.52
SHE10YGL228W NDD1Q08887 554 aa5.57□□□□□ -1.52
SHE10YGL228W PGC1Q08959 321 aa5.57□□□□□ -1.52
SHE10YGL228W HOS1Q12214 470 aa5.57□□□□□ -1.52
SHE10YGL228W MIS1P09440 975 aaKnown RBP5.56□□□□□ -1.52
SHE10YGL228W ACO1P19414 778 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
SHE10YGL228W NDI1P32340 513 aa5.56□□□□□ -1.52
SHE10YGL228W HEM12P32347 362 aaPredicted RBP5.56□□□□□ -1.52
SHE10YGL228W SMI1P32566 505 aa5.56□□□□□ -1.52
SHE10YGL228W YBR032WP38223 100 aa5.56□□□□□ -1.52
SHE10YGL228W ATG12P38316 186 aa5.56□□□□□ -1.52
SHE10YGL228W MEF2P39677 819 aa5.56□□□□□ -1.52
SHE10YGL228W DSN1P40568 576 aa5.56□□□□□ -1.52
SHE10YGL228W RRN7P40992 514 aa5.56□□□□□ -1.52
SHE10YGL228W PXA1P41909 870 aa5.56□□□□□ -1.52
SHE10YGL228W TRS85P46944 698 aa5.56□□□□□ -1.52
SHE10YGL228W SIW14P53965 281 aa5.56□□□□□ -1.52
SHE10YGL228W SLT2Q00772 484 aa5.56□□□□□ -1.52
SHE10YGL228W YMR206WQ03695 313 aa5.56□□□□□ -1.52
SHE10YGL228W NSE5Q03718 556 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms