RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W TSR1Q07381 788 aaKnown RBP4.31□□□□□ -1.72
UBP6YFR010W YOR352WQ08816 343 aa4.31□□□□□ -1.72
UBP6YFR010W GUP2Q08929 609 aa4.31□□□□□ -1.72
UBP6YFR010W HFI1Q12060 488 aa4.31□□□□□ -1.72
UBP6YFR010W NUR1Q12066 484 aa4.31□□□□□ -1.72
UBP6YFR010W GNT1Q12096 491 aa4.31□□□□□ -1.72
UBP6YFR010W DCS2Q12123 353 aa4.31□□□□□ -1.72
UBP6YFR010W TAF3Q12297 353 aa4.31□□□□□ -1.72
UBP6YFR010W SEC39Q12745 709 aa4.31□□□□□ -1.72
UBP6YFR010W YBL111CQ3E7Y5 667 aa4.31□□□□□ -1.72
UBP6YFR010W APM4Q99186 491 aa4.31□□□□□ -1.72
UBP6YFR010W TPK1P06244 397 aa4.3□□□□□ -1.72
UBP6YFR010W KSS1P14681 368 aa4.3□□□□□ -1.72
UBP6YFR010W CWH43P25618 953 aa4.3□□□□□ -1.72
UBP6YFR010W DOA4P32571 926 aa4.3□□□□□ -1.72
UBP6YFR010W GCS1P35197 352 aa4.3□□□□□ -1.72
UBP6YFR010W SAP190P36123 1033 aa4.3□□□□□ -1.72
UBP6YFR010W AIM3P38266 947 aaKnown RBP4.3□□□□□ -1.72
UBP6YFR010W IFA38P38286 347 aa4.3□□□□□ -1.72
UBP6YFR010W SLX1P38324 304 aa4.3□□□□□ -1.72
UBP6YFR010W TDA3P38758 523 aa4.3□□□□□ -1.72
UBP6YFR010W SAW1P39735 261 aa4.3□□□□□ -1.72
UBP6YFR010W YEL025CP39991 1188 aa4.3□□□□□ -1.72
UBP6YFR010W SDS3P40505 327 aa4.3□□□□□ -1.72
UBP6YFR010W GCV2P49095 1034 aa4.3□□□□□ -1.72
UBP6YFR010W DAM1P53267 343 aa4.3□□□□□ -1.72
UBP6YFR010W VPS75P53853 264 aa4.3□□□□□ -1.72
UBP6YFR010W DUS3Q06053 668 aaKnown RBP4.3□□□□□ -1.72
UBP6YFR010W OMS1Q06668 471 aa4.3□□□□□ -1.72
UBP6YFR010W BUG1Q12191 341 aa4.3□□□□□ -1.72
UBP6YFR010W IKI3Q06706 1349 aaKnown RBP4.3□□□□□ -1.72
UBP6YFR010W PRP6P19735 899 aaPredicted RBP4.29□□□□□ -1.72
UBP6YFR010W PHO3P24031 467 aa4.29□□□□□ -1.72
UBP6YFR010W THI80P35202 319 aa4.29□□□□□ -1.72
UBP6YFR010W OAF3P36023 863 aa4.29□□□□□ -1.72
UBP6YFR010W STB6P36085 766 aa4.29□□□□□ -1.72
UBP6YFR010W MRPL40P36534 297 aa4.29□□□□□ -1.72
UBP6YFR010W YRO2P38079 344 aa4.29□□□□□ -1.72
UBP6YFR010W YDR089WP38966 869 aa4.29□□□□□ -1.72
UBP6YFR010W MRX1P40050 688 aa4.29□□□□□ -1.72
UBP6YFR010W PUG1P40100 303 aa4.29□□□□□ -1.72
UBP6YFR010W YIL092WP40497 633 aa4.29□□□□□ -1.72
UBP6YFR010W SPO22P40511 975 aa4.29□□□□□ -1.72
UBP6YFR010W YIR014WP40570 242 aa4.29□□□□□ -1.72
UBP6YFR010W GCN20P43535 752 aaKnown RBP4.29□□□□□ -1.72
UBP6YFR010W YFL052WP43551 465 aa4.29□□□□□ -1.72
UBP6YFR010W LIA1P47120 325 aaKnown RBP4.29□□□□□ -1.72
UBP6YFR010W PUS4P48567 403 aaKnown RBP4.29□□□□□ -1.72
UBP6YFR010W SNO2P53823 222 aa4.29□□□□□ -1.72
UBP6YFR010W RPT6Q01939 405 aaKnown RBP4.29□□□□□ -1.72
UBP6YFR010W YHM2Q04013 314 aa4.29□□□□□ -1.72
UBP6YFR010W SNO4Q04902 237 aa4.29□□□□□ -1.72
UBP6YFR010W ARR1Q06596 294 aa4.29□□□□□ -1.72
UBP6YFR010W RSB1Q08417 382 aa4.29□□□□□ -1.72
UBP6YFR010W HSP33Q08914 237 aaKnown RBP4.29□□□□□ -1.72
UBP6YFR010W HSP32Q08992 237 aa4.29□□□□□ -1.72
UBP6YFR010W CHS5Q12114 671 aaKnown RBP4.29□□□□□ -1.72
UBP6YFR010W HER1Q12276 1246 aa4.29□□□□□ -1.72
UBP6YFR010W GLE1Q12315 538 aa4.29□□□□□ -1.72
UBP6YFR010W AVL9Q12500 764 aa4.29□□□□□ -1.72
UBP6YFR010W SSK22P25390 1331 aaPredicted RBP4.29□□□□□ -1.72
UBP6YFR010W SWI6P09959 803 aa4.28□□□□□ -1.72
UBP6YFR010W CLB1P24868 471 aa4.28□□□□□ -1.72
UBP6YFR010W MSP1P28737 362 aa4.28□□□□□ -1.72
UBP6YFR010W DEP1P31385 405 aa4.28□□□□□ -1.72
UBP6YFR010W APE3P37302 537 aaKnown RBP4.28□□□□□ -1.72
UBP6YFR010W YHR202WP38887 602 aa4.28□□□□□ -1.72
UBP6YFR010W SIP5P40210 489 aaKnown RBP4.28□□□□□ -1.72
UBP6YFR010W DSD1P53095 428 aa4.28□□□□□ -1.72
UBP6YFR010W DUO1P53168 247 aaKnown RBP4.28□□□□□ -1.72
UBP6YFR010W RTC4P53850 401 aa4.28□□□□□ -1.72
UBP6YFR010W ATP25Q03153 612 aa4.28□□□□□ -1.72
UBP6YFR010W ECM18Q04623 453 aa4.28□□□□□ -1.72
UBP6YFR010W YLR456WQ06199 204 aa4.28□□□□□ -1.72
UBP6YFR010W RPS21BQ3E754 87 aaKnown RBP4.28□□□□□ -1.72
UBP6YFR010W NOT3P06102 836 aaKnown RBP4.27□□□□□ -1.73
UBP6YFR010W BIK1P11709 440 aa4.27□□□□□ -1.73
UBP6YFR010W MDH1P17505 334 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
UBP6YFR010W ATP12P22135 325 aa4.27□□□□□ -1.73
UBP6YFR010W STE11P23561 717 aa4.27□□□□□ -1.73
UBP6YFR010W PRP22P24384 1145 aaKnown RBP4.27□□□□□ -1.73
UBP6YFR010W CCR4P31384 837 aaKnown RBP4.27□□□□□ -1.73
UBP6YFR010W DAD2P36162 133 aa4.27□□□□□ -1.73
UBP6YFR010W ADH5P38113 351 aaKnown RBP4.27□□□□□ -1.73
UBP6YFR010W MSG5P38590 489 aa4.27□□□□□ -1.73
UBP6YFR010W STN1P38960 494 aa4.27□□□□□ -1.73
UBP6YFR010W PSF2P40359 213 aa4.27□□□□□ -1.73
UBP6YFR010W EFM4P40516 257 aa4.27□□□□□ -1.73
UBP6YFR010W LOC1P43586 204 aaPredicted RBP4.27□□□□□ -1.73
UBP6YFR010W NIT3P49954 291 aa4.27□□□□□ -1.73
UBP6YFR010W MLC1P53141 149 aa4.27□□□□□ -1.73
UBP6YFR010W YGR054WP53235 642 aaKnown RBP4.27□□□□□ -1.73
UBP6YFR010W YGR283CP53336 341 aaPredicted RBP4.27□□□□□ -1.73
UBP6YFR010W BSC5P53755 489 aa4.27□□□□□ -1.73
UBP6YFR010W YNL144CP53907 740 aa4.27□□□□□ -1.73
UBP6YFR010W ECM22Q05958 814 aaPredicted RBP4.27□□□□□ -1.73
UBP6YFR010W PML1Q07930 204 aaPredicted RBP4.27□□□□□ -1.73
UBP6YFR010W TY3A-GQ12173 290 aa4.27□□□□□ -1.73
UBP6YFR010W YOL159C-AQ3E769 90 aa4.27□□□□□ -1.73
UBP6YFR010W TY3A-IQ99219 290 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms