RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W ZAP1P47043 880 aa5.25□□□□□ -1.57
DEG1YFL001W PAN2P53010 1115 aaPredicted RBP5.25□□□□□ -1.57
DEG1YFL001W TIM10P87108 93 aa5.25□□□□□ -1.57
DEG1YFL001W CLU1Q03690 1277 aaKnown RBP5.25□□□□□ -1.57
DEG1YFL001W RCO1Q04779 684 aa5.25□□□□□ -1.57
DEG1YFL001W IRC13Q08630 104 aa5.25□□□□□ -1.57
DEG1YFL001W TAH18Q12181 623 aa5.25□□□□□ -1.57
DEG1YFL001W YLR302CO13544 120 aa5.24□□□□□ -1.57
DEG1YFL001W RPB2P08518 1224 aaKnown RBP5.24□□□□□ -1.57
DEG1YFL001W SGF29P25554 259 aa5.24□□□□□ -1.57
DEG1YFL001W SWC3P31376 625 aa5.24□□□□□ -1.57
DEG1YFL001W MRP20P32387 263 aa5.24□□□□□ -1.57
DEG1YFL001W SAC6P32599 642 aaKnown RBP5.24□□□□□ -1.57
DEG1YFL001W NUP120P35729 1037 aa5.24□□□□□ -1.57
DEG1YFL001W MRPL7P36519 292 aa5.24□□□□□ -1.57
DEG1YFL001W ARC1P46672 376 aaKnown RBP5.24□□□□□ -1.57
DEG1YFL001W YJL163CP46996 555 aa5.24□□□□□ -1.57
DEG1YFL001W MNN10P50108 393 aaKnown RBP5.24□□□□□ -1.57
DEG1YFL001W TAM41P53230 385 aa5.24□□□□□ -1.57
DEG1YFL001W FHN1P53279 174 aa5.24□□□□□ -1.57
DEG1YFL001W MRPL19P53875 158 aa5.24□□□□□ -1.57
DEG1YFL001W TAF11Q04226 346 aa5.24□□□□□ -1.57
DEG1YFL001W VIP1Q06685 1146 aaKnown RBP5.24□□□□□ -1.57
DEG1YFL001W YKL033W-AQ86ZR7 236 aa5.24□□□□□ -1.57
DEG1YFL001W ATP2P00830 511 aaKnown RBP5.23□□□□□ -1.57
DEG1YFL001W YCR061WP25639 631 aa5.23□□□□□ -1.57
DEG1YFL001W CAP1P28495 268 aaKnown RBP5.23□□□□□ -1.57
DEG1YFL001W GCD7P32502 381 aaPredicted RBP5.23□□□□□ -1.57
DEG1YFL001W THI80P35202 319 aa5.23□□□□□ -1.57
DEG1YFL001W PHO11P35842 467 aa5.23□□□□□ -1.57
DEG1YFL001W YBR225WP38321 900 aa5.23□□□□□ -1.57
DEG1YFL001W PHO12P38693 467 aa5.23□□□□□ -1.57
DEG1YFL001W FMP10P40098 244 aa5.23□□□□□ -1.57
DEG1YFL001W VPS4P52917 437 aa5.23□□□□□ -1.57
DEG1YFL001W EFR3Q03653 782 aaKnown RBP5.23□□□□□ -1.57
DEG1YFL001W YLR287CQ05881 355 aa5.23□□□□□ -1.57
DEG1YFL001W TRM13Q12383 476 aa5.23□□□□□ -1.57
DEG1YFL001W TAF2P23255 1407 aa5.23□□□□□ -1.57
DEG1YFL001W CDC24P11433 854 aaPredicted RBP5.23□□□□□ -1.57
DEG1YFL001W PRP6P19735 899 aaPredicted RBP5.23□□□□□ -1.57
DEG1YFL001W PGS1P25578 521 aa5.23□□□□□ -1.57
DEG1YFL001W HIS7P33734 552 aaKnown RBP5.23□□□□□ -1.57
DEG1YFL001W TOD6P34219 525 aa5.23□□□□□ -1.57
DEG1YFL001W PSD1P39006 500 aa5.23□□□□□ -1.57
DEG1YFL001W FMP52P40008 231 aa5.23□□□□□ -1.57
DEG1YFL001W MCM6P53091 1017 aaKnown RBP5.23□□□□□ -1.57
DEG1YFL001W DUO1P53168 247 aaKnown RBP5.23□□□□□ -1.57
DEG1YFL001W ARE2P53629 642 aaKnown RBP5.23□□□□□ -1.57
DEG1YFL001W REG1Q00816 1014 aa5.23□□□□□ -1.57
DEG1YFL001W YSA1Q01976 231 aa5.23□□□□□ -1.57
DEG1YFL001W FRE5Q08908 694 aa5.23□□□□□ -1.57
DEG1YFL001W MLH3Q12083 715 aa5.23□□□□□ -1.57
DEG1YFL001W HSH49Q99181 213 aaPredicted RBP5.23□□□□□ -1.57
DEG1YFL001W SIN3P22579 1536 aa5.22□□□□□ -1.57
DEG1YFL001W TUB2P02557 457 aaKnown RBP5.22□□□□□ -1.57
DEG1YFL001W THR1P17423 357 aaKnown RBP5.22□□□□□ -1.57
DEG1YFL001W FUB1P25659 250 aa5.22□□□□□ -1.57
DEG1YFL001W NPL6P32832 435 aa5.22□□□□□ -1.57
DEG1YFL001W NPR2P39923 615 aa5.22□□□□□ -1.57
DEG1YFL001W SKP2P42843 763 aa5.22□□□□□ -1.57
DEG1YFL001W RMD8P43620 662 aa5.22□□□□□ -1.57
DEG1YFL001W ASE1P50275 885 aa5.22□□□□□ -1.57
DEG1YFL001W MFB1Q04922 465 aa5.22□□□□□ -1.57
DEG1YFL001W YSH1Q06224 779 aaPredicted RBP5.22□□□□□ -1.57
DEG1YFL001W URN1Q06525 465 aaKnown RBP5.22□□□□□ -1.57
DEG1YFL001W MDS3P53094 1487 aa5.22□□□□□ -1.57
DEG1YFL001W YLR358CO13565 187 aa5.21□□□□□ -1.58
DEG1YFL001W PMA1P05030 918 aaKnown RBP5.21□□□□□ -1.58
DEG1YFL001W ERG8P24521 451 aa5.21□□□□□ -1.58
DEG1YFL001W ERG4P25340 473 aa5.21□□□□□ -1.58
DEG1YFL001W URK1P27515 501 aa5.21□□□□□ -1.58
DEG1YFL001W GEX2P36173 615 aa5.21□□□□□ -1.58
DEG1YFL001W TDP1P38319 544 aa5.21□□□□□ -1.58
DEG1YFL001W SDH8P38345 138 aa5.21□□□□□ -1.58
DEG1YFL001W BUD16P39988 312 aa5.21□□□□□ -1.58
DEG1YFL001W TPA1P40032 644 aaKnown RBP5.21□□□□□ -1.58
DEG1YFL001W MTG1Q03151 367 aaPredicted RBP5.21□□□□□ -1.58
DEG1YFL001W USA1Q03714 838 aa5.21□□□□□ -1.58
DEG1YFL001W CRF1Q04930 467 aa5.21□□□□□ -1.58
DEG1YFL001W SPN1Q06505 410 aaPredicted RBP5.21□□□□□ -1.58
DEG1YFL001W TMA16Q08687 178 aa5.21□□□□□ -1.58
DEG1YFL001W HUA2Q12134 243 aa5.21□□□□□ -1.58
DEG1YFL001W SNU66Q12420 587 aaPredicted RBP5.21□□□□□ -1.58
DEG1YFL001W YOR111WQ99210 232 aa5.21□□□□□ -1.58
DEG1YFL001W PNO1Q99216 274 aaKnown RBP5.21□□□□□ -1.58
DEG1YFL001W VCX1Q99385 411 aa5.21□□□□□ -1.58
DEG1YFL001W SKI3P17883 1432 aaKnown RBP5.2□□□□□ -1.58
DEG1YFL001W ABF1P14164 731 aa5.2□□□□□ -1.58
DEG1YFL001W SPO16P17122 198 aa5.2□□□□□ -1.58
DEG1YFL001W FUR1P18562 216 aaKnown RBP5.2□□□□□ -1.58
DEG1YFL001W EFT1P32324 842 aaKnown RBP5.2□□□□□ -1.58
DEG1YFL001W ELF1P36053 145 aa5.2□□□□□ -1.58
DEG1YFL001W YJL206CP39529 758 aa5.2□□□□□ -1.58
DEG1YFL001W FCP1Q03254 732 aa5.2□□□□□ -1.58
DEG1YFL001W YDL086WQ07505 273 aa5.2□□□□□ -1.58
DEG1YFL001W ENT4Q07872 247 aa5.2□□□□□ -1.58
DEG1YFL001W NUS1Q12063 375 aa5.2□□□□□ -1.58
DEG1YFL001W ERG27Q12452 347 aaKnown RBP5.2□□□□□ -1.58
DEG1YFL001W YBR255C-AQ3E776 120 aa5.2□□□□□ -1.58
DEG1YFL001W YBR126W-AQ8TGU7 68 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms