RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A GLN4P13188 809 aaKnown RBP1.2□□□□□ -2.22
SDH6YDR379C-A BET2P20133 325 aa1.2□□□□□ -2.22
SDH6YDR379C-A CDC5P32562 705 aa1.2□□□□□ -2.22
SDH6YDR379C-A YJL193WP39542 402 aa1.2□□□□□ -2.22
SDH6YDR379C-A PRE5P40302 234 aaKnown RBP1.2□□□□□ -2.22
SDH6YDR379C-A BFA1P47113 574 aa1.2□□□□□ -2.22
SDH6YDR379C-A MAL11P53048 616 aa1.2□□□□□ -2.22
SDH6YDR379C-A ATG33Q06485 197 aa1.2□□□□□ -2.22
SDH6YDR379C-A YCG1Q06680 1035 aa1.2□□□□□ -2.22
SDH6YDR379C-A YLL056CQ12177 298 aa1.2□□□□□ -2.22
SDH6YDR379C-A GSY1P23337 708 aa1.19□□□□□ -2.22
SDH6YDR379C-A RPS2P25443 254 aaKnown RBP1.19□□□□□ -2.22
SDH6YDR379C-A RAD24P32641 659 aa1.19□□□□□ -2.22
SDH6YDR379C-A ATG27P46989 271 aa1.19□□□□□ -2.22
SDH6YDR379C-A ARP9Q05123 467 aa1.19□□□□□ -2.22
SDH6YDR379C-A VPS33P20795 691 aa1.18□□□□□ -2.22
SDH6YDR379C-A PBP2P38151 413 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
SDH6YDR379C-A LAS21P40367 830 aa1.18□□□□□ -2.22
SDH6YDR379C-A PLM2Q04383 521 aa1.18□□□□□ -2.22
SDH6YDR379C-A ECI1Q05871 280 aa1.18□□□□□ -2.22
SDH6YDR379C-A DIN7Q12086 430 aa1.18□□□□□ -2.22
SDH6YDR379C-A MDM12Q92328 271 aa1.18□□□□□ -2.22
SDH6YDR379C-A DSS1P39112 969 aa1.17□□□□□ -2.22
SDH6YDR379C-A SAP1P39955 897 aaKnown RBP1.17□□□□□ -2.22
SDH6YDR379C-A YGL242CP53066 181 aa1.17□□□□□ -2.22
SDH6YDR379C-A NSE5Q03718 556 aa1.17□□□□□ -2.22
SDH6YDR379C-A NOP8Q08287 484 aaPredicted RBP1.17□□□□□ -2.22
SDH6YDR379C-A GIN4Q12263 1142 aa1.17□□□□□ -2.22
SDH6YDR379C-A RPS17AP02407 136 aaKnown RBP1.16□□□□□ -2.22
SDH6YDR379C-A RPS17BP14127 136 aaKnown RBP1.16□□□□□ -2.22
SDH6YDR379C-A MSH1P25846 959 aa1.16□□□□□ -2.22
SDH6YDR379C-A SMK1P41808 388 aa1.16□□□□□ -2.22
SDH6YDR379C-A YDL183CP48569 320 aa1.16□□□□□ -2.22
SDH6YDR379C-A IGO1P53897 168 aa1.16□□□□□ -2.22
SDH6YDR379C-A YML119WQ03208 357 aa1.16□□□□□ -2.22
SDH6YDR379C-A YDL012CQ12489 107 aa1.16□□□□□ -2.22
SDH6YDR379C-A Q0010Q9ZZX9 128 aa1.16□□□□□ -2.22
SDH6YDR379C-A BAR1P12630 587 aa1.15□□□□□ -2.23
SDH6YDR379C-A NAT1P12945 854 aaKnown RBP1.15□□□□□ -2.23
SDH6YDR379C-A MSS51P32335 436 aa1.15□□□□□ -2.23
SDH6YDR379C-A PLC1P32383 869 aa1.15□□□□□ -2.23
SDH6YDR379C-A DSS4P32601 143 aa1.15□□□□□ -2.23
SDH6YDR379C-A TRS65P32893 560 aa1.15□□□□□ -2.23
SDH6YDR379C-A RIM2P38127 377 aa1.15□□□□□ -2.23
SDH6YDR379C-A RRP8P38961 392 aaKnown RBP1.15□□□□□ -2.23
SDH6YDR379C-A YGL036WP53185 909 aaPredicted RBP1.15□□□□□ -2.23
SDH6YDR379C-A UBP16Q02863 499 aa1.15□□□□□ -2.23
SDH6YDR379C-A POS5Q06892 414 aa1.15□□□□□ -2.23
SDH6YDR379C-A SOD1P00445 154 aaKnown RBP1.14□□□□□ -2.23
SDH6YDR379C-A CHO2P05374 869 aaKnown RBP1.14□□□□□ -2.23
SDH6YDR379C-A VPS41P38959 992 aa1.14□□□□□ -2.23
SDH6YDR379C-A HUL5P53119 910 aa1.14□□□□□ -2.23
SDH6YDR379C-A AMD2P22580 549 aa1.13□□□□□ -2.23
SDH6YDR379C-A RPN2P32565 945 aaKnown RBP1.13□□□□□ -2.23
SDH6YDR379C-A MTC7P32633 139 aa1.13□□□□□ -2.23
SDH6YDR379C-A YHR033WP38690 423 aa1.13□□□□□ -2.23
SDH6YDR379C-A MAM1P40065 302 aa1.13□□□□□ -2.23
SDH6YDR379C-A NOP15P53927 220 aaPredicted RBP1.13□□□□□ -2.23
SDH6YDR379C-A LCB4Q12246 624 aa1.13□□□□□ -2.23
SDH6YDR379C-A MEF1P25039 761 aa1.12□□□□□ -2.23
SDH6YDR379C-A PCM1P38628 557 aaKnown RBP1.12□□□□□ -2.23
SDH6YDR379C-A CAC2Q04199 468 aa1.12□□□□□ -2.23
SDH6YDR379C-A YML053CQ04978 212 aa1.12□□□□□ -2.23
SDH6YDR379C-A PDR8Q06149 701 aa1.12□□□□□ -2.23
SDH6YDR379C-A SWI6P09959 803 aa1.11□□□□□ -2.23
SDH6YDR379C-A MGR1P25573 417 aa1.11□□□□□ -2.23
SDH6YDR379C-A SDH8P38345 138 aa1.11□□□□□ -2.23
SDH6YDR379C-A TPA1P40032 644 aaKnown RBP1.11□□□□□ -2.23
SDH6YDR379C-A IML2P47031 731 aa1.11□□□□□ -2.23
SDH6YDR379C-A YJL049WP47048 450 aa1.11□□□□□ -2.23
SDH6YDR379C-A SMA1Q02651 245 aa1.11□□□□□ -2.23
SDH6YDR379C-A RNY1Q02933 434 aaKnown RBP1.11□□□□□ -2.23
SDH6YDR379C-A TUF1P02992 437 aaKnown RBP1.1□□□□□ -2.23
SDH6YDR379C-A CBP1P07252 654 aa1.1□□□□□ -2.23
SDH6YDR379C-A HMG2P12684 1045 aa1.1□□□□□ -2.23
SDH6YDR379C-A PCL2P25693 308 aa1.1□□□□□ -2.23
SDH6YDR379C-A YEL045CP32616 141 aa1.1□□□□□ -2.23
SDH6YDR379C-A MSN2P33748 704 aa1.1□□□□□ -2.23
SDH6YDR379C-A GSM1P42950 618 aa1.1□□□□□ -2.23
SDH6YDR379C-A IES1P43579 692 aa1.1□□□□□ -2.23
SDH6YDR379C-A YAT1P80235 687 aa1.1□□□□□ -2.23
SDH6YDR379C-A VPS8P39702 1274 aa1.09□□□□□ -2.23
SDH6YDR379C-A SES1P07284 462 aaKnown RBP1.08□□□□□ -2.24
SDH6YDR379C-A ILV2P07342 687 aaKnown RBP1.08□□□□□ -2.24
SDH6YDR379C-A OCT1P35999 772 aa1.08□□□□□ -2.24
SDH6YDR379C-A RTS1P38903 757 aa1.08□□□□□ -2.24
SDH6YDR379C-A UBP8P50102 471 aa1.08□□□□□ -2.24
SDH6YDR379C-A BSC1Q12140 328 aa1.08□□□□□ -2.24
SDH6YDR379C-A ERR1P0CX10 437 aa1.07□□□□□ -2.24
SDH6YDR379C-A ERR2P0CX11 437 aa1.07□□□□□ -2.24
SDH6YDR379C-A SEC12P11655 471 aa1.07□□□□□ -2.24
SDH6YDR379C-A SFL1P20134 766 aa1.07□□□□□ -2.24
SDH6YDR379C-A CBP3P21560 335 aa1.07□□□□□ -2.24
SDH6YDR379C-A MDM31P38880 579 aa1.07□□□□□ -2.24
SDH6YDR379C-A MET13P53128 600 aa1.07□□□□□ -2.24
SDH6YDR379C-A YNL181WP53878 407 aa1.07□□□□□ -2.24
SDH6YDR379C-A EAF7P53911 425 aaKnown RBP1.07□□□□□ -2.24
SDH6YDR379C-A YDR415CQ04033 374 aaPredicted RBP1.07□□□□□ -2.24
SDH6YDR379C-A PAL1Q05518 499 aaKnown RBP1.07□□□□□ -2.24
SDH6YDR379C-A YDL242WQ07746 117 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms