RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C YLF2P38746 405 aa3.39□□□□□ -1.87
SNU56YDR240C MTG2P38860 518 aa3.39□□□□□ -1.87
SNU56YDR240C YMR124WP39523 943 aaKnown RBP3.39□□□□□ -1.87
SNU56YDR240C YIL024CP40543 189 aa3.39□□□□□ -1.87
SNU56YDR240C PLM2Q04383 521 aa3.39□□□□□ -1.87
SNU56YDR240C PHM6Q05637 104 aa3.39□□□□□ -1.87
SNU56YDR240C DBP10Q12389 995 aaKnown RBP3.39□□□□□ -1.87
SNU56YDR240C ILS1P09436 1072 aaKnown RBP3.38□□□□□ -1.87
SNU56YDR240C RRP43P25359 394 aaPredicted RBP3.38□□□□□ -1.87
SNU56YDR240C AAT1Q01802 451 aa3.38□□□□□ -1.87
SNU56YDR240C VTC3Q02725 835 aa3.38□□□□□ -1.87
SNU56YDR240C YML119WQ03208 357 aa3.38□□□□□ -1.87
SNU56YDR240C TRS31Q03337 283 aa3.38□□□□□ -1.87
SNU56YDR240C YDL242WQ07746 117 aa3.38□□□□□ -1.87
SNU56YDR240C LYS21Q12122 440 aaKnown RBP3.38□□□□□ -1.87
SNU56YDR240C YER175W-AQ8TGU4 54 aa3.38□□□□□ -1.87
SNU56YDR240C AIM44Q99299 758 aa3.38□□□□□ -1.87
SNU56YDR240C YER190C-BP0CX94 160 aa3.37□□□□□ -1.87
SNU56YDR240C YEL077W-AP0CX95 160 aa3.37□□□□□ -1.87
SNU56YDR240C YGR296C-BP0CX96 160 aa3.37□□□□□ -1.87
SNU56YDR240C YPL283W-BP0CX97 160 aa3.37□□□□□ -1.87
SNU56YDR240C YPR204C-AP0CX98 160 aa3.37□□□□□ -1.87
SNU56YDR240C PHO3P24031 467 aa3.37□□□□□ -1.87
SNU56YDR240C MRC1P25588 1096 aa3.37□□□□□ -1.87
SNU56YDR240C MGM1P32266 881 aa3.37□□□□□ -1.87
SNU56YDR240C TGL1P34163 548 aa3.37□□□□□ -1.87
SNU56YDR240C SDS22P36047 338 aa3.37□□□□□ -1.87
SNU56YDR240C STB5P38699 743 aa3.37□□□□□ -1.87
SNU56YDR240C VFA1P40080 203 aa3.37□□□□□ -1.87
SNU56YDR240C UBP16Q02863 499 aa3.37□□□□□ -1.87
SNU56YDR240C SNU56Q03782 492 aaKnown RBP3.37□□□□□ -1.87
SNU56YDR240C RAD34Q06665 692 aa3.37□□□□□ -1.87
SNU56YDR240C YPL191CQ08930 360 aa3.37□□□□□ -1.87
SNU56YDR240C Q0010Q9ZZX9 128 aa3.37□□□□□ -1.87
SNU56YDR240C VAS1P07806 1104 aaKnown RBP3.36□□□□□ -1.87
SNU56YDR240C PXL1P36166 706 aa3.36□□□□□ -1.87
SNU56YDR240C TOM71P38825 639 aaKnown RBP3.36□□□□□ -1.87
SNU56YDR240C VPS8P39702 1274 aa3.36□□□□□ -1.87
SNU56YDR240C SAP1P39955 897 aaKnown RBP3.36□□□□□ -1.87
SNU56YDR240C PEX14P53112 341 aa3.36□□□□□ -1.87
SNU56YDR240C TDA9Q04545 1251 aa3.36□□□□□ -1.87
SNU56YDR240C CRD1Q07560 283 aa3.36□□□□□ -1.87
SNU56YDR240C GET3Q12154 354 aaKnown RBP3.36□□□□□ -1.87
SNU56YDR240C CTT1P06115 562 aa3.35□□□□□ -1.87
SNU56YDR240C ENP1P38333 483 aaKnown RBP3.35□□□□□ -1.87
SNU56YDR240C IMD2P38697 523 aaKnown RBP3.35□□□□□ -1.87
SNU56YDR240C SAW1P39735 261 aa3.35□□□□□ -1.87
SNU56YDR240C CIN1P40987 1014 aa3.35□□□□□ -1.87
SNU56YDR240C YJR120WP47157 116 aa3.35□□□□□ -1.87
SNU56YDR240C IMD3P50095 523 aaKnown RBP3.35□□□□□ -1.87
SNU56YDR240C CNM67P53865 581 aaKnown RBP3.35□□□□□ -1.87
SNU56YDR240C NUP53Q03790 475 aa3.35□□□□□ -1.87
SNU56YDR240C HER1Q12276 1246 aa3.35□□□□□ -1.87
SNU56YDR240C SES1P07284 462 aaKnown RBP3.35□□□□□ -1.87
SNU56YDR240C PRE2P30656 287 aaKnown RBP3.35□□□□□ -1.87
SNU56YDR240C TFC4P33339 1025 aa3.35□□□□□ -1.87
SNU56YDR240C VBA2P38358 474 aaKnown RBP3.35□□□□□ -1.87
SNU56YDR240C ARO9P38840 513 aaPredicted RBP3.35□□□□□ -1.87
SNU56YDR240C POL31P46957 487 aa3.35□□□□□ -1.87
SNU56YDR240C YAT1P80235 687 aa3.35□□□□□ -1.87
SNU56YDR240C RTC1Q08281 1341 aa3.34□□□□□ -1.87
SNU56YDR240C AIM17P23180 465 aaKnown RBP3.34□□□□□ -1.88
SNU56YDR240C YCP4P25349 247 aaKnown RBP3.34□□□□□ -1.88
SNU56YDR240C SWC3P31376 625 aa3.34□□□□□ -1.88
SNU56YDR240C RGT1P32862 1170 aa3.34□□□□□ -1.88
SNU56YDR240C RPF2P36160 344 aaKnown RBP3.34□□□□□ -1.88
SNU56YDR240C SCS2P40075 244 aaKnown RBP3.34□□□□□ -1.88
SNU56YDR240C MEP2P41948 499 aa3.34□□□□□ -1.88
SNU56YDR240C LSC1P53598 329 aaKnown RBP3.34□□□□□ -1.88
SNU56YDR240C RPL15BP54780 204 aaPredicted RBP3.34□□□□□ -1.88
SNU56YDR240C VPS64Q03944 604 aa3.34□□□□□ -1.88
SNU56YDR240C CRF1Q04930 467 aa3.34□□□□□ -1.88
SNU56YDR240C YML053CQ04978 212 aa3.34□□□□□ -1.88
SNU56YDR240C YOR389WQ08912 624 aa3.34□□□□□ -1.88
SNU56YDR240C NUR1Q12066 484 aa3.34□□□□□ -1.88
SNU56YDR240C YBR255C-AQ3E776 120 aa3.34□□□□□ -1.88
SNU56YDR240C PDE1P22434 369 aa3.33□□□□□ -1.88
SNU56YDR240C ARA2Q04212 335 aa3.33□□□□□ -1.88
SNU56YDR240C AAD4Q07747 329 aa3.33□□□□□ -1.88
SNU56YDR240C YPT1P01123 206 aaKnown RBP3.32□□□□□ -1.88
SNU56YDR240C RPS7AP26786 190 aaKnown RBP3.32□□□□□ -1.88
SNU56YDR240C ATO2P32907 282 aa3.32□□□□□ -1.88
SNU56YDR240C ARB1P40024 610 aaKnown RBP3.32□□□□□ -1.88
SNU56YDR240C MDV1P47025 714 aa3.32□□□□□ -1.88
SNU56YDR240C AIM6Q07716 390 aa3.32□□□□□ -1.88
SNU56YDR240C ATX2Q12067 313 aa3.32□□□□□ -1.88
SNU56YDR240C ADH4P10127 382 aa3.31□□□□□ -1.88
SNU56YDR240C RPT3P33298 428 aaKnown RBP3.31□□□□□ -1.88
SNU56YDR240C ERC1P38767 581 aa3.31□□□□□ -1.88
SNU56YDR240C SWD1P39706 426 aa3.31□□□□□ -1.88
SNU56YDR240C IMA5P40884 581 aa3.31□□□□□ -1.88
SNU56YDR240C ORC5P50874 479 aa3.31□□□□□ -1.88
SNU56YDR240C YRB30P53107 440 aaPredicted RBP3.31□□□□□ -1.88
SNU56YDR240C YNL034WP53963 612 aa3.31□□□□□ -1.88
SNU56YDR240C ARP7Q12406 477 aa3.31□□□□□ -1.88
SNU56YDR240C ILV2P07342 687 aaKnown RBP3.3□□□□□ -1.88
SNU56YDR240C SIP1P32578 815 aa3.3□□□□□ -1.88
SNU56YDR240C FLO5P38894 1075 aa3.3□□□□□ -1.88
SNU56YDR240C ERV46P39727 415 aa3.3□□□□□ -1.88
SNU56YDR240C YJL107CP42947 387 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms