RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W KRE9P39005 276 aa1.32□□□□□ -2.2
PRP42YDR235W YJL193WP39542 402 aa1.32□□□□□ -2.2
PRP42YDR235W ARA2Q04212 335 aa1.32□□□□□ -2.2
PRP42YDR235W TLG2Q08144 397 aa1.32□□□□□ -2.2
PRP42YDR235W CYB2P00175 591 aa1.31□□□□□ -2.2
PRP42YDR235W VPS33P20795 691 aa1.31□□□□□ -2.2
PRP42YDR235W SEC65P29478 273 aa1.31□□□□□ -2.2
PRP42YDR235W PCL6P40038 420 aa1.31□□□□□ -2.2
PRP42YDR235W NOP7P53261 605 aaKnown RBP1.31□□□□□ -2.2
PRP42YDR235W CDC26P14724 124 aa1.3□□□□□ -2.2
PRP42YDR235W SEC1P30619 724 aaKnown RBP1.3□□□□□ -2.2
PRP42YDR235W CDC5P32562 705 aa1.3□□□□□ -2.2
PRP42YDR235W DSS4P32601 143 aa1.3□□□□□ -2.2
PRP42YDR235W SWH1P35845 1188 aa1.3□□□□□ -2.2
PRP42YDR235W MGS1P40151 587 aa1.3□□□□□ -2.2
PRP42YDR235W VID28P40547 921 aa1.3□□□□□ -2.2
PRP42YDR235W YJL107CP42947 387 aa1.3□□□□□ -2.2
PRP42YDR235W CUL3P53202 744 aa1.3□□□□□ -2.2
PRP42YDR235W YNL193WP53870 558 aa1.3□□□□□ -2.2
PRP42YDR235W TFB2Q02939 513 aa1.3□□□□□ -2.2
PRP42YDR235W LYS21Q12122 440 aaKnown RBP1.3□□□□□ -2.2
PRP42YDR235W YBR298C-AQ8TGK4 73 aa1.3□□□□□ -2.2
PRP42YDR235W RTC1Q08281 1341 aa1.3□□□□□ -2.2
PRP42YDR235W RRP43P25359 394 aaPredicted RBP1.29□□□□□ -2.2
PRP42YDR235W MF(ALPHA)2P32435 120 aa1.29□□□□□ -2.2
PRP42YDR235W OAF3P36023 863 aa1.29□□□□□ -2.2
PRP42YDR235W AVT5P38176 459 aa1.29□□□□□ -2.2
PRP42YDR235W FAT1P38225 669 aa1.29□□□□□ -2.2
PRP42YDR235W HXT6P39003 570 aaKnown RBP1.29□□□□□ -2.2
PRP42YDR235W HXT7P39004 570 aa1.29□□□□□ -2.2
PRP42YDR235W YGR153WP48238 217 aa1.29□□□□□ -2.2
PRP42YDR235W POB3Q04636 552 aaKnown RBP1.29□□□□□ -2.2
PRP42YDR235W RAD34Q06665 692 aa1.29□□□□□ -2.2
PRP42YDR235W Q0010Q9ZZX9 128 aa1.29□□□□□ -2.2
PRP42YDR235W TUF1P02992 437 aaKnown RBP1.29□□□□□ -2.2
PRP42YDR235W CBS2P14905 389 aa1.29□□□□□ -2.2
PRP42YDR235W BET2P20133 325 aa1.29□□□□□ -2.2
PRP42YDR235W KES1P35844 434 aaKnown RBP1.29□□□□□ -2.2
PRP42YDR235W RMA1P36001 430 aaKnown RBP1.29□□□□□ -2.2
PRP42YDR235W CKB2P38930 258 aa1.29□□□□□ -2.2
PRP42YDR235W ERV46P39727 415 aa1.29□□□□□ -2.2
PRP42YDR235W YJL070CP40361 888 aa1.29□□□□□ -2.2
PRP42YDR235W NOP2P40991 618 aaKnown RBP1.29□□□□□ -2.2
PRP42YDR235W YJR096WP47137 282 aa1.29□□□□□ -2.2
PRP42YDR235W YML119WQ03208 357 aa1.29□□□□□ -2.2
PRP42YDR235W AMD2P22580 549 aa1.28□□□□□ -2.2
PRP42YDR235W PRO3P32263 286 aaKnown RBP1.28□□□□□ -2.2
PRP42YDR235W SFP1P32432 683 aa1.28□□□□□ -2.2
PRP42YDR235W HES1P35843 434 aa1.28□□□□□ -2.2
PRP42YDR235W MNN2P38069 597 aa1.28□□□□□ -2.2
PRP42YDR235W SDH8P38345 138 aa1.28□□□□□ -2.2
PRP42YDR235W YHR218WP38899 603 aa1.28□□□□□ -2.2
PRP42YDR235W LAS21P40367 830 aa1.28□□□□□ -2.2
PRP42YDR235W ORC5P50874 479 aa1.28□□□□□ -2.2
PRP42YDR235W COG2P53271 262 aa1.28□□□□□ -2.2
PRP42YDR235W ECM9Q02202 377 aa1.28□□□□□ -2.2
PRP42YDR235W YHM2Q04013 314 aa1.28□□□□□ -2.2
PRP42YDR235W HFI1Q12060 488 aa1.28□□□□□ -2.2
PRP42YDR235W CHO2P05374 869 aaKnown RBP1.27□□□□□ -2.21
PRP42YDR235W RPS21AP0C0V8 87 aaKnown RBP1.27□□□□□ -2.21
PRP42YDR235W PMS1P14242 873 aa1.27□□□□□ -2.21
PRP42YDR235W SAP1P39955 897 aaKnown RBP1.27□□□□□ -2.21
PRP42YDR235W SDA1P53313 767 aaKnown RBP1.27□□□□□ -2.21
PRP42YDR235W SQS1P53866 767 aaKnown RBP1.27□□□□□ -2.21
PRP42YDR235W PLM2Q04383 521 aa1.27□□□□□ -2.21
PRP42YDR235W APL5Q08951 932 aaKnown RBP1.27□□□□□ -2.21
PRP42YDR235W LCB4Q12246 624 aa1.27□□□□□ -2.21
PRP42YDR235W APM4Q99186 491 aa1.27□□□□□ -2.21
PRP42YDR235W CBP3P21560 335 aa1.26□□□□□ -2.21
PRP42YDR235W PLC1P32383 869 aa1.26□□□□□ -2.21
PRP42YDR235W HXT4P32467 576 aa1.26□□□□□ -2.21
PRP42YDR235W PRP19P32523 503 aaKnown RBP1.26□□□□□ -2.21
PRP42YDR235W ARN1P38731 627 aa1.26□□□□□ -2.21
PRP42YDR235W VPS8P39702 1274 aa1.26□□□□□ -2.21
PRP42YDR235W MAM1P40065 302 aa1.26□□□□□ -2.21
PRP42YDR235W VPS25P47142 202 aa1.26□□□□□ -2.21
PRP42YDR235W PSP1P50896 841 aaKnown RBP1.26□□□□□ -2.21
PRP42YDR235W PEF1P53238 335 aa1.26□□□□□ -2.21
PRP42YDR235W ORC1P54784 914 aaPredicted RBP1.26□□□□□ -2.21
PRP42YDR235W ACS1Q01574 713 aa1.26□□□□□ -2.21
PRP42YDR235W UBP16Q02863 499 aa1.26□□□□□ -2.21
PRP42YDR235W IZH1Q03419 316 aa1.26□□□□□ -2.21
PRP42YDR235W SEC12P11655 471 aa1.26□□□□□ -2.21
PRP42YDR235W DGR2P32330 852 aa1.26□□□□□ -2.21
PRP42YDR235W OCA5P38738 679 aa1.26□□□□□ -2.21
PRP42YDR235W ASG1P40467 964 aa1.26□□□□□ -2.21
PRP42YDR235W YMR254CQ04838 102 aa1.26□□□□□ -2.21
PRP42YDR235W YML053CQ04978 212 aa1.26□□□□□ -2.21
PRP42YDR235W SES1P07284 462 aaKnown RBP1.25□□□□□ -2.21
PRP42YDR235W HNM1P19807 563 aa1.25□□□□□ -2.21
PRP42YDR235W RRP8P38961 392 aaKnown RBP1.25□□□□□ -2.21
PRP42YDR235W PTA1Q01329 785 aaPredicted RBP1.25□□□□□ -2.21
PRP42YDR235W YLR112WQ12130 139 aa1.25□□□□□ -2.21
PRP42YDR235W RPL8AP17076 256 aaKnown RBP1.24□□□□□ -2.21
PRP42YDR235W AEP2P22136 580 aa1.24□□□□□ -2.21
PRP42YDR235W GZF3P42944 551 aaKnown RBP1.24□□□□□ -2.21
PRP42YDR235W FPR4Q06205 392 aaPredicted RBP1.24□□□□□ -2.21
PRP42YDR235W PDA1P16387 420 aaKnown RBP1.23□□□□□ -2.21
PRP42YDR235W BUD14P27637 709 aa1.23□□□□□ -2.21
PRP42YDR235W EFM2P38347 419 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms