RNA–Protein interactions for RNA: YDR211W

GCD6, Transcript of Catalytic epsilon subunit of the translation initiation factor eIF2B, yeast

Gene GCD6, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD6	YDR211W	BUD2	P33314	1104 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
GCD6	YDR211W	ABZ1	P37254	787 aa	Predicted RBP	3.13	□□□□□ -1.91
GCD6	YDR211W	YBL028C	P38202	106 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	HSM3	P38348	480 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	RFC3	P38629	340 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	MMS21	P38632	267 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	SPF1	P39986	1215 aa	Known RBP	3.13	□□□□□ -1.91
GCD6	YDR211W	YJL107C	P42947	387 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	TAF1	P46677	1066 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	MCM6	P53091	1017 aa	Known RBP	3.13	□□□□□ -1.91
GCD6	YDR211W	USE1	P53146	245 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	DRN1	P53255	507 aa	Known RBP	3.13	□□□□□ -1.91
GCD6	YDR211W	NOG2	P53742	486 aa	Known RBP	3.13	□□□□□ -1.91
GCD6	YDR211W	ESBP6	P53918	673 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	ORC3	P54790	616 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	OSH6	Q02201	448 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	PPM1	Q04081	328 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	UFO1	Q04511	668 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	TDA5	Q06417	326 aa	Known RBP	3.13	□□□□□ -1.91
GCD6	YDR211W	RSB1	Q08417	382 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	CDC53	Q12018	815 aa	Known RBP	3.13	□□□□□ -1.91
GCD6	YDR211W	HIF1	Q12373	385 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	GRX6	Q12438	231 aa		3.13	□□□□□ -1.91
GCD6	YDR211W	SPS1	P08458	490 aa		3.12	□□□□□ -1.91
GCD6	YDR211W	AAD3	P25612	363 aa		3.12	□□□□□ -1.91
GCD6	YDR211W	CCL1	P37366	393 aa		3.12	□□□□□ -1.91
GCD6	YDR211W	DUG2	P38149	878 aa		3.12	□□□□□ -1.91
GCD6	YDR211W	CBR1	P38626	284 aa	Known RBP	3.12	□□□□□ -1.91
GCD6	YDR211W	TDA11	P38854	504 aa		3.12	□□□□□ -1.91
GCD6	YDR211W	YDR089W	P38966	869 aa		3.12	□□□□□ -1.91
GCD6	YDR211W	YMR134W	P40207	237 aa		3.12	□□□□□ -1.91
GCD6	YDR211W	ACL4	Q03771	387 aa		3.12	□□□□□ -1.91
GCD6	YDR211W	BUD22	Q04347	519 aa	Known RBP	3.12	□□□□□ -1.91
GCD6	YDR211W	DFG16	Q99234	619 aa		3.12	□□□□□ -1.91
GCD6	YDR211W	FKS1	P38631	1876 aa	Known RBP	3.12	□□□□□ -1.91
GCD6	YDR211W	SRD1	P09007	221 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	AEP2	P22136	580 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	NPP1	P25353	742 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	RPC19	P28000	142 aa	Known RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	ICL1	P28240	557 aa	Predicted RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	EUG1	P32474	517 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
GCD6	YDR211W	SLA2	P33338	968 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	RPC37	P36121	282 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	ECM4	P36156	370 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	STV1	P37296	890 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	MRX3	P38172	270 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	ETP1	P38748	585 aa	Known RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	SMF2	P38778	549 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	LIN1	P38852	340 aa	Predicted RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	TAT2	P38967	592 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	GEM1	P39722	662 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	DSE1	P40077	573 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	GVP36	P40531	326 aa	Known RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	SEC27	P41811	889 aa	Known RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	GPD2	P41911	440 aa	Known RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	YGR111W	P53265	400 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	LSB1	P53281	241 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	BIO4	P53630	237 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	RPA49	Q01080	415 aa	Predicted RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	SHR3	Q02774	210 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	DIA2	Q08496	732 aa	Predicted RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	YLR053C	Q12026	108 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	PSF3	Q12146	194 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	YPT6	Q99260	215 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	BI4	P03879	638 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	YML002W	P0CF17	737 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	PCK1	P10963	549 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	CDC24	P11433	854 aa	Predicted RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	PHO8	P11491	566 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	PRP22	P24384	1145 aa	Known RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	GFD2	P25370	566 aa	Known RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	RRT12	P25381	491 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	SIN4	P32259	974 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	MUD1	P32605	298 aa	Known RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	TRM2	P33753	639 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	SEC66	P33754	206 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	SEG2	P34250	1132 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	CST26	P38226	397 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	YBR184W	P38299	523 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	TRM5	P38793	499 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	SCS2	P40075	244 aa	Known RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	MTC3	P53077	123 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	HOP2	P53187	214 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	TAM41	P53230	385 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	YGR125W	P53273	1036 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	UTP8	P53276	713 aa	Known RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	NOP15	P53927	220 aa	Predicted RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	COG6	P53959	839 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	PTA1	Q01329	785 aa	Predicted RBP	3.11	□□□□□ -1.91
GCD6	YDR211W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
GCD6	YDR211W	YML119W	Q03208	357 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	ARO80	Q04052	950 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	YMR027W	Q04371	470 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	PCL8	Q08966	492 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	YDL177C	Q12257	170 aa		3.11	□□□□□ -1.91
GCD6	YDR211W	TEF1	P02994	458 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	BI2	P03873	423 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	SNF1	P06782	633 aa	Known RBP	3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms